FFCP PHASE1:Mm9::chrX:102052545..102052559,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=272790|HGNC=|MCL_coexpression_id=13|UniProt=Q52KG3,Q8CBC3|association_with_transcript=46bp_to_ENSMUST00000033575,NM_053206,uc009uak.1_5end|description=CAGE_peak_2_at_Magee2_5end|id=chrX:102052545..102052559,-|ontology_enrichment_celltype=CL:0000117!1.25e-14!23;CL:0000337!1.25e-14!23;CL:0000540!2.50e-10!33;CL:0000047!2.50e-10!33;CL:0000031!2.50e-10!33;CL:0000404!2.50e-10!33;CL:0000221!3.97e-10!44;CL:0000133!3.97e-10!44;CL:0002319!4.11e-10!43;CL:0000393!2.10e-07!39;CL:0000211!2.10e-07!39;CL:0000055!3.25e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,6.66e-28,23;CL:0000337,6.66e-28,23;CL:0000540,1.87e-17,33;CL:0000047,1.87e-17,33;CL:0000031,1.87e-17,33;CL:0000404,1.87e-17,33;CL:0002319,9.31e-16,43;CL:0000221,3.07e-15,44;CL:0000133,3.07e-15,44;CL:0000393,8.55e-14,39;CL:0000211,8.55e-14,39;CL:0002321,4.05e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!9.41e-25!73;UBERON:0005743!9.41e-25!73;UBERON:0000073!2.66e-24!75;UBERON:0001016!2.66e-24!75;UBERON:0001049!9.60e-24!52;UBERON:0005068!9.60e-24!52;UBERON:0006241!9.60e-24!52;UBERON:0007135!9.60e-24!52;UBERON:0000955!1.02e-21!50;UBERON:0006238!1.02e-21!50;UBERON:0002616!4.05e-21!49;UBERON:0003080!7.17e-21!40;UBERON:0002780!3.91e-20!39;UBERON:0001890!3.91e-20!39;UBERON:0006240!3.91e-20!39;UBERON:0000033!7.29e-20!63;UBERON:0003056!1.32e-18!49;UBERON:0002346!1.37e-18!71;UBERON:0003075!1.37e-18!71;UBERON:0007284!1.37e-18!71;UBERON:0002020!1.67e-18!34;UBERON:0004121!2.28e-17!102;UBERON:0000924!2.28e-17!102;UBERON:0006601!2.28e-17!102;UBERON:0002791!1.25e-14!29;UBERON:0003528!1.25e-14!29;UBERON:0001893!1.25e-14!29;UBERON:0000153!2.40e-12!94;UBERON:0007811!7.41e-11!86;UBERON:0000956!1.99e-09!21;UBERON:0001869!1.99e-09!21;UBERON:0000203!1.99e-09!21;UBERON:0002619!1.59e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.93e-45,54;UBERON:0001049,7.79e-42,52;UBERON:0005068,7.79e-42,52;UBERON:0006241,7.79e-42,52;UBERON:0007135,7.79e-42,52;UBERON:0001017,9.09e-42,73;UBERON:0001016,2.65e-40,75;UBERON:0003080,2.31e-34,40;UBERON:0000955,9.81e-34,47;UBERON:0006238,9.81e-34,47;UBERON:0002020,2.61e-33,34;UBERON:0002780,6.99e-33,39;UBERON:0001890,6.99e-33,39;UBERON:0006240,6.99e-33,39;UBERON:0002616,1.50e-32,46;UBERON:0002346,8.57e-32,64;UBERON:0003075,8.57e-32,64;UBERON:0007284,8.57e-32,64;UBERON:0004121,1.12e-30,95;UBERON:0000924,1.12e-30,95;UBERON:0006601,1.12e-30,95;UBERON:0010371,1.93e-26,73;UBERON:0003056,2.90e-26,49;UBERON:0003528,2.28e-25,29;UBERON:0002791,2.28e-25,29;UBERON:0001893,2.28e-25,29;UBERON:0010314,1.31e-18,92;UBERON:0000956,1.46e-16,21;UBERON:0001869,1.46e-16,21;UBERON:0000203,1.46e-16,21;UBERON:0000025,1.25e-14,114;UBERON:0002619,3.10e-14,17;UBERON:0004111,6.75e-14,122;UBERON:0002240,1.48e-10,6;UBERON:0005174,1.48e-10,6;UBERON:0001137,1.48e-10,6;UBERON:0002420,4.75e-10,8;UBERON:0007245,4.75e-10,8;UBERON:0010009,4.75e-10,8;UBERON:0010011,4.75e-10,8;UBERON:0000454,4.75e-10,8;UBERON:0011216,1.31e-09,194;UBERON:0001948,1.95e-09,5;UBERON:0002315,1.95e-09,5;UBERON:0002021,5.64e-09,10;UBERON:0000411,5.64e-09,10;UBERON:0001950,5.64e-09,10;UBERON:0001894,3.51e-08,10;UBERON:0006222,3.51e-08,10;UBERON:0003076,1.03e-07,12;UBERON:0003057,1.03e-07,12;UBERON:0002950,1.54e-07,4;UBERON:0001891,1.54e-07,4;UBERON:0009616,1.54e-07,4;UBERON:0010286,1.54e-07,4|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,1.09843091367236,1.36100929351998,0.279972843250725,1.43752564364972,0,0,0,0,0.286533439938757,0,3.23706337375356,7.93486468908049,5.07065122804943,0,0,0,0,0,0.299600110518405,0,0.725827286159344,1.4850653216486,1.68259969081106,4.57041575046086,5.74258206474195,1.34739879136449,1.43768206527355,0,2.20231761998777,1.65993539510744,3.37934373163736,3.16527090552465,4.20843160571084,6.77187381723788,3.62937898701795,5.06486349028512,5.65353516774197,6.77645746589436,6.12198227436143,4.84638559145781,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0.505524445014783,0,0,0,0,0,0.461230994512117,0.150722640552623,0.352766121407114,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0.838705871541442,0,0.762421362438388,3.59497534571574,0.915001205637253,1.88481528169297,1.91206752211504,0.767146371990992,2.70124457927428,1.94689515681309,0.305518091550949,0.124406970610093,0.758168275301024,0.210441855886474,0.390361328888111,0.229902104433473,0.180062129805349,0,0.544291993210623,0.640568601424249,0.0937017245597288,0,0.862271971731369,1.89106080167819,1.23165786914764,0.43839146485515,0.278047249225598,0.696504333044333,0.411564272815887,0.59710280045548,0.702213187313235,0.51469581422943,0,0.414251545071004,0.469052119962192,0.36012412292203,0.23674473558521,0,0.154267112887378,0,0,0,0.16455984991348,0,0,0,0,0,4.6263788684108,2.57261530948211,0,0,0,0.232236671860439,0.257734922644187,0,0.444756087689741,0,0,0,0,0,0,0,0,0,0.948339504765408,0.228497025219458,0,0.610953983535943,0.387904974335251,0,0.0632365371242573,0,0.156998727841375,0,0,0.166845105716094,0,0.224862112384854,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,1.13694847062291,1.46668478797823,0.509235257325564,0.704070744865506,0,0,0.195133647857799,0.630540576424764,0,0,0,0.172684981865896,0,0,0,0,0,1.44495530989013,1.40654023910644,0,0,0,0.390438744296638,0.430846795465598,0,0,0,0,0.584511715822624,0.395287777946524,1.60660658210904,0,0.35613120733451,0,0.164970122972535,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0,0,0,0,3.74483566329167,1.62054984628179,1.4229455216103,0.857348140126369,1.41872186913819,1.96205699362278,1.31639216481697,0.913394847343798,0.23467170806371,0,0,0,0.322928853391811,0,0,0,0,1.8542530201051,0,0.619160603889667,0,0,0.136694227721025,0.228778173206523,0.169978429993855,0.69975726161829,0.690999869022119,0,0.790839983952838,0.203319467126849,0.216010681643603,0,0.218362563746178,0.404593039154462,0,0,0,2.4853572523477,0,0.897099276263873,0.66183396182839,0.583353565032143,0.258319646955462,0.337912250981556,0.117357238645754,0,0.314578033277133,0,0,0.316011120628178,0.202725215290164,0.308132871494482,0,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,3.95326289831947,2.76195141904306,3.43737308063638,2.40594455281163,2.05524755931193,0,3.37511250115903,1.80128481289688,1.35942722695261,0.51776031175182,0.62272408550506,0,0.682934423016537,0,0.628839487883947,0.551530525350042,0,1.44224540067226,0.320919209591815,0.505394423527595,1.01391719956096,0.943131706930381,0.842773567228942,1.28050304809739,0.574354689556133,1.42888107384922,0.695305955669133,0.77163688185482,0.824171801606613,0.588795680537589,0.342869252385415,0.887379030796687,1.1921809497366,1.0174249164263,0.941093804153306,0.507687647350059,0.73171189149109,0.526139422875686,1.35804113845862,1.12228454331548,0.355905054372522,0.492522411877817,0.409231043169689,0.619747364743864,0.385813221962283,1.24905288968973,0.701794825336225,0.214871054048298,0.191288332068843,0.220591419119515,0.463735671240843|short_description=p2@Magee2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:272790 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q52KG3,uniprot:Q8CBC3 | |||
|association_with_transcript=46bp_to_ENSMUST00000033575,NM_053206,uc009uak.1_5end | |||
|cluster_id=chrX:102052545..102052559,- | |||
|description=CAGE_peak_2_at_Magee2_5end | |||
|id=chrX:102052545..102052559,- | |||
|ontology_enrichment_celltype=CL:0000117!1.25e-14!23;CL:0000337!1.25e-14!23;CL:0000540!2.50e-10!33;CL:0000047!2.50e-10!33;CL:0000031!2.50e-10!33;CL:0000404!2.50e-10!33;CL:0000221!3.97e-10!44;CL:0000133!3.97e-10!44;CL:0002319!4.11e-10!43;CL:0000393!2.10e-07!39;CL:0000211!2.10e-07!39;CL:0000055!3.25e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.66e-28,23;CL:0000337,6.66e-28,23;CL:0000540,1.87e-17,33;CL:0000047,1.87e-17,33;CL:0000031,1.87e-17,33;CL:0000404,1.87e-17,33;CL:0002319,9.31e-16,43;CL:0000221,3.07e-15,44;CL:0000133,3.07e-15,44;CL:0000393,8.55e-14,39;CL:0000211,8.55e-14,39;CL:0002321,4.05e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.41e-25!73;UBERON:0005743!9.41e-25!73;UBERON:0000073!2.66e-24!75;UBERON:0001016!2.66e-24!75;UBERON:0001049!9.60e-24!52;UBERON:0005068!9.60e-24!52;UBERON:0006241!9.60e-24!52;UBERON:0007135!9.60e-24!52;UBERON:0000955!1.02e-21!50;UBERON:0006238!1.02e-21!50;UBERON:0002616!4.05e-21!49;UBERON:0003080!7.17e-21!40;UBERON:0002780!3.91e-20!39;UBERON:0001890!3.91e-20!39;UBERON:0006240!3.91e-20!39;UBERON:0000033!7.29e-20!63;UBERON:0003056!1.32e-18!49;UBERON:0002346!1.37e-18!71;UBERON:0003075!1.37e-18!71;UBERON:0007284!1.37e-18!71;UBERON:0002020!1.67e-18!34;UBERON:0004121!2.28e-17!102;UBERON:0000924!2.28e-17!102;UBERON:0006601!2.28e-17!102;UBERON:0002791!1.25e-14!29;UBERON:0003528!1.25e-14!29;UBERON:0001893!1.25e-14!29;UBERON:0000153!2.40e-12!94;UBERON:0007811!7.41e-11!86;UBERON:0000956!1.99e-09!21;UBERON:0001869!1.99e-09!21;UBERON:0000203!1.99e-09!21;UBERON:0002619!1.59e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.93e-45,54;UBERON:0001049,7.79e-42,52;UBERON:0005068,7.79e-42,52;UBERON:0006241,7.79e-42,52;UBERON:0007135,7.79e-42,52;UBERON:0001017,9.09e-42,73;UBERON:0001016,2.65e-40,75;UBERON:0003080,2.31e-34,40;UBERON:0000955,9.81e-34,47;UBERON:0006238,9.81e-34,47;UBERON:0002020,2.61e-33,34;UBERON:0002780,6.99e-33,39;UBERON:0001890,6.99e-33,39;UBERON:0006240,6.99e-33,39;UBERON:0002616,1.50e-32,46;UBERON:0002346,8.57e-32,64;UBERON:0003075,8.57e-32,64;UBERON:0007284,8.57e-32,64;UBERON:0004121,1.12e-30,95;UBERON:0000924,1.12e-30,95;UBERON:0006601,1.12e-30,95;UBERON:0010371,1.93e-26,73;UBERON:0003056,2.90e-26,49;UBERON:0003528,2.28e-25,29;UBERON:0002791,2.28e-25,29;UBERON:0001893,2.28e-25,29;UBERON:0010314,1.31e-18,92;UBERON:0000956,1.46e-16,21;UBERON:0001869,1.46e-16,21;UBERON:0000203,1.46e-16,21;UBERON:0000025,1.25e-14,114;UBERON:0002619,3.10e-14,17;UBERON:0004111,6.75e-14,122;UBERON:0002240,1.48e-10,6;UBERON:0005174,1.48e-10,6;UBERON:0001137,1.48e-10,6;UBERON:0002420,4.75e-10,8;UBERON:0007245,4.75e-10,8;UBERON:0010009,4.75e-10,8;UBERON:0010011,4.75e-10,8;UBERON:0000454,4.75e-10,8;UBERON:0011216,1.31e-09,194;UBERON:0001948,1.95e-09,5;UBERON:0002315,1.95e-09,5;UBERON:0002021,5.64e-09,10;UBERON:0000411,5.64e-09,10;UBERON:0001950,5.64e-09,10;UBERON:0001894,3.51e-08,10;UBERON:0006222,3.51e-08,10;UBERON:0003076,1.03e-07,12;UBERON:0003057,1.03e-07,12;UBERON:0002950,1.54e-07,4;UBERON:0001891,1.54e-07,4;UBERON:0009616,1.54e-07,4;UBERON:0010286,1.54e-07,4 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,1.09843091367236,1.36100929351998,0.279972843250725,1.43752564364972,0,0,0,0,0.286533439938757,0,3.23706337375356,7.93486468908049,5.07065122804943,0,0,0,0,0,0.299600110518405,0,0.725827286159344,1.4850653216486,1.68259969081106,4.57041575046086,5.74258206474195,1.34739879136449,1.43768206527355,0,2.20231761998777,1.65993539510744,3.37934373163736,3.16527090552465,4.20843160571084,6.77187381723788,3.62937898701795,5.06486349028512,5.65353516774197,6.77645746589436,6.12198227436143,4.84638559145781,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0.505524445014783,0,0,0,0,0,0.461230994512117,0.150722640552623,0.352766121407114,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0.838705871541442,0,0.762421362438388,3.59497534571574,0.915001205637253,1.88481528169297,1.91206752211504,0.767146371990992,2.70124457927428,1.94689515681309,0.305518091550949,0.124406970610093,0.758168275301024,0.210441855886474,0.390361328888111,0.229902104433473,0.180062129805349,0,0.544291993210623,0.640568601424249,0.0937017245597288,0,0.862271971731369,1.89106080167819,1.23165786914764,0.43839146485515,0.278047249225598,0.696504333044333,0.411564272815887,0.59710280045548,0.702213187313235,0.51469581422943,0,0.414251545071004,0.469052119962192,0.36012412292203,0.23674473558521,0,0.154267112887378,0,0,0,0.16455984991348,0,0,0,0,0,4.6263788684108,2.57261530948211,0,0,0,0.232236671860439,0.257734922644187,0,0.444756087689741,0,0,0,0,0,0,0,0,0,0.948339504765408,0.228497025219458,0,0.610953983535943,0.387904974335251,0,0.0632365371242573,0,0.156998727841375,0,0,0.166845105716094,0,0.224862112384854,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,1.13694847062291,1.46668478797823,0.509235257325564,0.704070744865506,0,0,0.195133647857799,0.630540576424764,0,0,0,0.172684981865896,0,0,0,0,0,1.44495530989013,1.40654023910644,0,0,0,0.390438744296638,0.430846795465598,0,0,0,0,0.584511715822624,0.395287777946524,1.60660658210904,0,0.35613120733451,0,0.164970122972535,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0,0,0,0,3.74483566329167,1.62054984628179,1.4229455216103,0.857348140126369,1.41872186913819,1.96205699362278,1.31639216481697,0.913394847343798,0.23467170806371,0,0,0,0.322928853391811,0,0,0,0,1.8542530201051,0,0.619160603889667,0,0,0.136694227721025,0.228778173206523,0.169978429993855,0.69975726161829,0.690999869022119,0,0.790839983952838,0.203319467126849,0.216010681643603,0,0.218362563746178,0.404593039154462,0,0,0,2.4853572523477,0,0.897099276263873,0.66183396182839,0.583353565032143,0.258319646955462,0.337912250981556,0.117357238645754,0,0.314578033277133,0,0,0.316011120628178,0.202725215290164,0.308132871494482,0,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,3.95326289831947,2.76195141904306,3.43737308063638,2.40594455281163,2.05524755931193,0,3.37511250115903,1.80128481289688,1.35942722695261,0.51776031175182,0.62272408550506,0,0.682934423016537,0,0.628839487883947,0.551530525350042,0,1.44224540067226,0.320919209591815,0.505394423527595,1.01391719956096,0.943131706930381,0.842773567228942,1.28050304809739,0.574354689556133,1.42888107384922,0.695305955669133,0.77163688185482,0.824171801606613,0.588795680537589,0.342869252385415,0.887379030796687,1.1921809497366,1.0174249164263,0.941093804153306,0.507687647350059,0.73171189149109,0.526139422875686,1.35804113845862,1.12228454331548,0.355905054372522,0.492522411877817,0.409231043169689,0.619747364743864,0.385813221962283,1.24905288968973,0.701794825336225,0.214871054048298,0.191288332068843,0.220591419119515,0.463735671240843 | |||
|short_description=p2@Magee2 | |||
}} |
Revision as of 21:54, 5 August 2015
Short description: | p2@Magee2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Magee2_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 46bp_to_ENSMUST00000033575, NM_053206, uc009uak.1_5end |
EntrezGene: | 272790 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.66e-28 | 23 |
neuroblast (sensu Vertebrata) | 6.66e-28 | 23 |
neuron | 1.87e-17 | 33 |
neuronal stem cell | 1.87e-17 | 33 |
neuroblast | 1.87e-17 | 33 |
electrically signaling cell | 1.87e-17 | 33 |
neural cell | 9.31e-16 | 43 |
ectodermal cell | 3.07e-15 | 44 |
neurectodermal cell | 3.07e-15 | 44 |
electrically responsive cell | 8.55e-14 | 39 |
electrically active cell | 8.55e-14 | 39 |
embryonic cell | 4.05e-07 | 70 |