FFCP PHASE1:Mm9::chrX:100381307..100381318,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=138|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:100381307..100381318,-|id=chrX:100381307..100381318,-|ontology_enrichment_celltype=CL:0000117!2.06e-22!23;CL:0000337!2.06e-22!23;CL:0000540!2.49e-15!33;CL:0000047!2.49e-15!33;CL:0000031!2.49e-15!33;CL:0000404!2.49e-15!33;CL:0000393!4.98e-12!39;CL:0000211!4.98e-12!39;CL:0002319!2.33e-10!43;CL:0000221!5.45e-10!44;CL:0000133!5.45e-10!44;CL:0000055!4.15e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.15e-14,23;CL:0000337,1.15e-14,23;CL:0002610,1.77e-12,3;CL:0002614,1.23e-11,3;CL:0000540,1.08e-09,33;CL:0000047,1.08e-09,33;CL:0000031,1.08e-09,33;CL:0000404,1.08e-09,33;CL:0000393,6.20e-08,39;CL:0000211,6.20e-08,39;CL:0002319,4.90e-07,43;CL:0000221,7.75e-07,44;CL:0000133,7.75e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.08e-38!52;UBERON:0005068!3.08e-38!52;UBERON:0006241!3.08e-38!52;UBERON:0007135!3.08e-38!52;UBERON:0002020!1.32e-34!34;UBERON:0002616!1.92e-34!49;UBERON:0001017!1.95e-34!73;UBERON:0005743!1.95e-34!73;UBERON:0000955!1.57e-33!50;UBERON:0006238!1.57e-33!50;UBERON:0000073!3.62e-33!75;UBERON:0001016!3.62e-33!75;UBERON:0002346!2.63e-29!71;UBERON:0003075!2.63e-29!71;UBERON:0007284!2.63e-29!71;UBERON:0000033!5.78e-29!63;UBERON:0002791!2.09e-27!29;UBERON:0003528!2.09e-27!29;UBERON:0001893!2.09e-27!29;UBERON:0003080!6.34e-27!40;UBERON:0002780!1.23e-25!39;UBERON:0001890!1.23e-25!39;UBERON:0006240!1.23e-25!39;UBERON:0003056!4.88e-25!49;UBERON:0004121!1.65e-24!102;UBERON:0000924!1.65e-24!102;UBERON:0006601!1.65e-24!102;UBERON:0007811!4.00e-18!86;UBERON:0000956!1.05e-17!21;UBERON:0001869!1.05e-17!21;UBERON:0000203!1.05e-17!21;UBERON:0002021!9.28e-16!10;UBERON:0000411!9.28e-16!10;UBERON:0001950!9.28e-16!10;UBERON:0000153!1.28e-15!94;UBERON:0002619!2.22e-13!17;UBERON:0000025!8.33e-13!114;UBERON:0003076!2.37e-11!12;UBERON:0003057!2.37e-11!12;UBERON:0004111!3.21e-11!122;UBERON:0002420!6.13e-11!8;UBERON:0007245!6.13e-11!8;UBERON:0010009!6.13e-11!8;UBERON:0010011!6.13e-11!8;UBERON:0000454!6.13e-11!8;UBERON:0002240!1.24e-09!6;UBERON:0005174!1.24e-09!6;UBERON:0001137!1.24e-09!6;UBERON:0002298!1.52e-09!6;UBERON:0001948!2.17e-08!5;UBERON:0002315!2.17e-08!5;UBERON:0000064!2.52e-07!99;UBERON:0002950!3.66e-07!4;UBERON:0001891!3.66e-07!4;UBERON:0009616!3.66e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.54e-35,54;UBERON:0002021,1.07e-34,10;UBERON:0000411,1.07e-34,10;UBERON:0001950,1.07e-34,10;UBERON:0001049,1.55e-29,52;UBERON:0005068,1.55e-29,52;UBERON:0006241,1.55e-29,52;UBERON:0007135,1.55e-29,52;UBERON:0002020,6.75e-28,34;UBERON:0001017,3.64e-27,73;UBERON:0001016,2.45e-26,75;UBERON:0002346,2.72e-23,64;UBERON:0003075,2.72e-23,64;UBERON:0007284,2.72e-23,64;UBERON:0003080,1.37e-22,40;UBERON:0003528,8.37e-22,29;UBERON:0002791,8.37e-22,29;UBERON:0001893,8.37e-22,29;UBERON:0002616,1.12e-21,46;UBERON:0000955,3.82e-21,47;UBERON:0006238,3.82e-21,47;UBERON:0002780,1.71e-20,39;UBERON:0001890,1.71e-20,39;UBERON:0006240,1.71e-20,39;UBERON:0004121,5.77e-20,95;UBERON:0000924,5.77e-20,95;UBERON:0006601,5.77e-20,95;UBERON:0010371,5.97e-20,73;UBERON:0002619,9.95e-20,17;UBERON:0003056,7.41e-18,49;UBERON:0000956,1.19e-15,21;UBERON:0001869,1.19e-15,21;UBERON:0000203,1.19e-15,21;UBERON:0010314,4.95e-15,92;UBERON:0002950,1.28e-14,4;UBERON:0001891,1.28e-14,4;UBERON:0009616,1.28e-14,4;UBERON:0010286,1.28e-14,4;UBERON:0004684,1.77e-12,3;UBERON:0002275,1.77e-12,3;UBERON:0002038,1.23e-11,3;UBERON:0009663,1.23e-11,3;UBERON:0009661,1.23e-11,3;UBERON:0000125,1.23e-11,3;UBERON:0002308,1.23e-11,3;UBERON:0000025,2.27e-11,114;UBERON:0004111,2.30e-10,122;UBERON:0002240,4.79e-10,6;UBERON:0005174,4.79e-10,6;UBERON:0001137,4.79e-10,6;UBERON:0011216,1.17e-07,194;UBERON:0001948,1.88e-07,5;UBERON:0002315,1.88e-07,5;UBERON:0003076,2.44e-07,12;UBERON:0003057,2.44e-07,12;UBERON:0002420,2.70e-07,8;UBERON:0007245,2.70e-07,8;UBERON:0010009,2.70e-07,8;UBERON:0010011,2.70e-07,8;UBERON:0000454,2.70e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0.725827286159344,0.810035629990144,0.210324961351382,2.28520787523043,0.662605622854841,0.122490799214954,0,0,3.30347642998166,4.34136949489638,6.45147439676223,0.263772575460388,0.365950574409639,1.04182674111352,2.23346399201105,2.8138130501584,2.75036845998258,5.00868595305235,3.70166370077668,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,1.19832511523858,0.457500602818626,0.251308704225729,0.695297280769106,0.767146371990992,1.24672826735736,1.1356888414743,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.187403449119458,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.411618449517138,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,1.12385412991454,0.703270119553219,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,2.30162618253588,4.01026859407578,1.89038500578056,3.42541259885321,2.2661816921691,1.35004500046361,2.70192721934532,3.17199686288943,2.07104124700728,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0,0.231768651889711,0,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chrX:100381307..100381318,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=138 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chrX:100381307..100381318,- | |||
|description=CAGE_peak_at_chrX:100381307..100381318,- | |||
|id=chrX:100381307..100381318,- | |||
|ontology_enrichment_celltype=CL:0000117!2.06e-22!23;CL:0000337!2.06e-22!23;CL:0000540!2.49e-15!33;CL:0000047!2.49e-15!33;CL:0000031!2.49e-15!33;CL:0000404!2.49e-15!33;CL:0000393!4.98e-12!39;CL:0000211!4.98e-12!39;CL:0002319!2.33e-10!43;CL:0000221!5.45e-10!44;CL:0000133!5.45e-10!44;CL:0000055!4.15e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.15e-14,23;CL:0000337,1.15e-14,23;CL:0002610,1.77e-12,3;CL:0002614,1.23e-11,3;CL:0000540,1.08e-09,33;CL:0000047,1.08e-09,33;CL:0000031,1.08e-09,33;CL:0000404,1.08e-09,33;CL:0000393,6.20e-08,39;CL:0000211,6.20e-08,39;CL:0002319,4.90e-07,43;CL:0000221,7.75e-07,44;CL:0000133,7.75e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.08e-38!52;UBERON:0005068!3.08e-38!52;UBERON:0006241!3.08e-38!52;UBERON:0007135!3.08e-38!52;UBERON:0002020!1.32e-34!34;UBERON:0002616!1.92e-34!49;UBERON:0001017!1.95e-34!73;UBERON:0005743!1.95e-34!73;UBERON:0000955!1.57e-33!50;UBERON:0006238!1.57e-33!50;UBERON:0000073!3.62e-33!75;UBERON:0001016!3.62e-33!75;UBERON:0002346!2.63e-29!71;UBERON:0003075!2.63e-29!71;UBERON:0007284!2.63e-29!71;UBERON:0000033!5.78e-29!63;UBERON:0002791!2.09e-27!29;UBERON:0003528!2.09e-27!29;UBERON:0001893!2.09e-27!29;UBERON:0003080!6.34e-27!40;UBERON:0002780!1.23e-25!39;UBERON:0001890!1.23e-25!39;UBERON:0006240!1.23e-25!39;UBERON:0003056!4.88e-25!49;UBERON:0004121!1.65e-24!102;UBERON:0000924!1.65e-24!102;UBERON:0006601!1.65e-24!102;UBERON:0007811!4.00e-18!86;UBERON:0000956!1.05e-17!21;UBERON:0001869!1.05e-17!21;UBERON:0000203!1.05e-17!21;UBERON:0002021!9.28e-16!10;UBERON:0000411!9.28e-16!10;UBERON:0001950!9.28e-16!10;UBERON:0000153!1.28e-15!94;UBERON:0002619!2.22e-13!17;UBERON:0000025!8.33e-13!114;UBERON:0003076!2.37e-11!12;UBERON:0003057!2.37e-11!12;UBERON:0004111!3.21e-11!122;UBERON:0002420!6.13e-11!8;UBERON:0007245!6.13e-11!8;UBERON:0010009!6.13e-11!8;UBERON:0010011!6.13e-11!8;UBERON:0000454!6.13e-11!8;UBERON:0002240!1.24e-09!6;UBERON:0005174!1.24e-09!6;UBERON:0001137!1.24e-09!6;UBERON:0002298!1.52e-09!6;UBERON:0001948!2.17e-08!5;UBERON:0002315!2.17e-08!5;UBERON:0000064!2.52e-07!99;UBERON:0002950!3.66e-07!4;UBERON:0001891!3.66e-07!4;UBERON:0009616!3.66e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.54e-35,54;UBERON:0002021,1.07e-34,10;UBERON:0000411,1.07e-34,10;UBERON:0001950,1.07e-34,10;UBERON:0001049,1.55e-29,52;UBERON:0005068,1.55e-29,52;UBERON:0006241,1.55e-29,52;UBERON:0007135,1.55e-29,52;UBERON:0002020,6.75e-28,34;UBERON:0001017,3.64e-27,73;UBERON:0001016,2.45e-26,75;UBERON:0002346,2.72e-23,64;UBERON:0003075,2.72e-23,64;UBERON:0007284,2.72e-23,64;UBERON:0003080,1.37e-22,40;UBERON:0003528,8.37e-22,29;UBERON:0002791,8.37e-22,29;UBERON:0001893,8.37e-22,29;UBERON:0002616,1.12e-21,46;UBERON:0000955,3.82e-21,47;UBERON:0006238,3.82e-21,47;UBERON:0002780,1.71e-20,39;UBERON:0001890,1.71e-20,39;UBERON:0006240,1.71e-20,39;UBERON:0004121,5.77e-20,95;UBERON:0000924,5.77e-20,95;UBERON:0006601,5.77e-20,95;UBERON:0010371,5.97e-20,73;UBERON:0002619,9.95e-20,17;UBERON:0003056,7.41e-18,49;UBERON:0000956,1.19e-15,21;UBERON:0001869,1.19e-15,21;UBERON:0000203,1.19e-15,21;UBERON:0010314,4.95e-15,92;UBERON:0002950,1.28e-14,4;UBERON:0001891,1.28e-14,4;UBERON:0009616,1.28e-14,4;UBERON:0010286,1.28e-14,4;UBERON:0004684,1.77e-12,3;UBERON:0002275,1.77e-12,3;UBERON:0002038,1.23e-11,3;UBERON:0009663,1.23e-11,3;UBERON:0009661,1.23e-11,3;UBERON:0000125,1.23e-11,3;UBERON:0002308,1.23e-11,3;UBERON:0000025,2.27e-11,114;UBERON:0004111,2.30e-10,122;UBERON:0002240,4.79e-10,6;UBERON:0005174,4.79e-10,6;UBERON:0001137,4.79e-10,6;UBERON:0011216,1.17e-07,194;UBERON:0001948,1.88e-07,5;UBERON:0002315,1.88e-07,5;UBERON:0003076,2.44e-07,12;UBERON:0003057,2.44e-07,12;UBERON:0002420,2.70e-07,8;UBERON:0007245,2.70e-07,8;UBERON:0010009,2.70e-07,8;UBERON:0010011,2.70e-07,8;UBERON:0000454,2.70e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0.725827286159344,0.810035629990144,0.210324961351382,2.28520787523043,0.662605622854841,0.122490799214954,0,0,3.30347642998166,4.34136949489638,6.45147439676223,0.263772575460388,0.365950574409639,1.04182674111352,2.23346399201105,2.8138130501584,2.75036845998258,5.00868595305235,3.70166370077668,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,1.19832511523858,0.457500602818626,0.251308704225729,0.695297280769106,0.767146371990992,1.24672826735736,1.1356888414743,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.187403449119458,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.411618449517138,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,1.12385412991454,0.703270119553219,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,2.30162618253588,4.01026859407578,1.89038500578056,3.42541259885321,2.2661816921691,1.35004500046361,2.70192721934532,3.17199686288943,2.07104124700728,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0,0.231768651889711,0,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chrX:100381307..100381318,- | |||
}} |
Latest revision as of 21:29, 5 August 2015
Short description: | p@chrX:100381307..100381318, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:100381307..100381318, - |
Coexpression cluster: | MCL_coexpression_mm9:138 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.15e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.15e-14 | 23 |
raphe nuclei neuron | 1.77e-12 | 3 |
neuron of the substantia nigra | 1.23e-11 | 3 |
neuron | 1.08e-09 | 33 |
neuronal stem cell | 1.08e-09 | 33 |
neuroblast | 1.08e-09 | 33 |
electrically signaling cell | 1.08e-09 | 33 |
electrically responsive cell | 6.20e-08 | 39 |
electrically active cell | 6.20e-08 | 39 |
neural cell | 4.90e-07 | 43 |
ectodermal cell | 7.75e-07 | 44 |
neurectodermal cell | 7.75e-07 | 44 |