FFCP PHASE1:Mm9::chrM:8600..8616,+: Difference between revisions
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{{FFCP|EntrezGene=17710|HGNC=|MCL_coexpression_id=415|UniProt=Q7JCX7|association_with_transcript=0bp_to_ENSMUST00000082409_5end|description=CAGE_peak_1_at_COX3_5end|id=chrM:8600..8616,+|ontology_enrichment_celltype=CL:0000063!6.81e-19!66;CL:0000988!6.46e-11!32;CL:0002032!6.46e-11!32;CL:0000037!6.46e-11!32;CL:0000566!6.46e-11!32;CL:0000837!6.46e-11!32;CL:0000144!1.86e-10!121;CL:0000012!1.86e-10!121;CL:0002320!4.22e-10!46;CL:0000134!4.22e-10!46;CL:0002371!1.96e-09!118;CL:0000066!3.75e-09!25;CL:0002031!1.13e-08!25;CL:0000219!1.16e-08!54;CL:0000548!1.66e-08!115;CL:0000004!1.66e-08!115;CL:0000255!1.66e-08!115;CL:0002076!4.34e-07!15;CL:0000838!5.67e-07!12;CL:0000542!7.90e-07!13;CL:0000051!7.90e-07!13|ontology_enrichment_celltype_v019_2=CL:0002320,1.37e-20,46;CL:0000134,1.37e-20,46;CL:0000988,2.13e-20,32;CL:0002032,2.13e-20,32;CL:0000037,2.13e-20,32;CL:0000837,2.13e-20,32;CL:0000219,5.20e-20,54;CL:0000066,3.75e-19,25;CL:0002031,6.78e-18,25;CL:0000034,7.38e-15,97;CL:0000223,4.07e-14,20;CL:0002076,7.53e-14,15;CL:0000838,7.95e-12,12;CL:0002563,1.94e-11,9;CL:0002251,1.94e-11,9;CL:0000738,2.75e-11,17;CL:0002087,2.75e-11,17;CL:0000723,5.37e-11,91;CL:0000048,5.37e-11,91;CL:0000049,7.41e-11,19;CL:0000542,1.07e-10,13;CL:0000051,1.07e-10,13;CL:0000791,1.23e-10,9;CL:0000789,1.23e-10,9;CL:0002420,1.23e-10,9;CL:0002419,1.23e-10,9;CL:0000790,1.23e-10,9;CL:0000084,1.35e-10,11;CL:0000827,1.35e-10,11;CL:0000624,1.64e-09,8;CL:0000075,2.16e-09,7;CL:0000239,1.42e-08,6;CL:0000677,1.42e-08,6;CL:0000584,1.42e-08,6;CL:0000763,1.43e-08,16;CL:0000839,1.20e-07,13;CL:0000893,1.94e-07,6;CL:0002489,1.94e-07,6;CL:0000898,1.94e-07,6;CL:0000809,1.94e-07,6;CL:0000810,1.94e-07,6;CL:0000895,1.94e-07,6;CL:0000808,1.94e-07,6;CL:0000894,1.94e-07,6;CL:0000806,1.94e-07,6;CL:0000807,1.94e-07,6;CL:0000805,1.94e-07,6;CL:0002425,1.94e-07,6;CL:0002436,1.94e-07,6;CL:0002427,1.94e-07,6;CL:0002428,1.94e-07,6;CL:0002429,1.94e-07,6;CL:0002433,1.94e-07,6;CL:0002431,1.94e-07,6;CL:0002432,1.94e-07,6;CL:0000050,6.14e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!4.22e-10!46;UBERON:0000344!8.96e-10!15;UBERON:0001242!2.48e-08!13;UBERON:0000060!2.48e-08!13;UBERON:0001262!2.48e-08!13;UBERON:0004786!2.48e-08!13;UBERON:0000485!1.84e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.37e-20,46;UBERON:0000344,5.17e-16,15;UBERON:0001242,2.96e-13,13;UBERON:0001262,2.96e-13,13;UBERON:0004786,2.96e-13,13;UBERON:0000485,4.72e-13,11;UBERON:0003350,1.94e-11,9;UBERON:0004808,1.94e-11,9;UBERON:0001277,1.94e-11,9;UBERON:0004923,1.66e-08,24|phase1_expression=8.64803774365887,19.1936474201649,29.5749505603198,108.887116070459,108.193477668411,7.55456723603504,41.1158247448125,15.4947988129892,27.87616698603,22.2361300005894,28.9358366301103,10.6894693053751,18.6608795625014,14.5117868015536,0,25.9168342258977,25.8837894907414,38.1709220083468,33.7301506670117,39.4682376172168,0.17008658030214,0.0992909512008853,45.9711628884526,68.7967418011649,85.3402525569873,41.9189333803965,30.1533397311352,18.3150547783006,92.1613584363413,16.6339885641554,13.9690221712842,6.98533740805594,0,63.3926724061755,17.908800424579,22.275442478038,15.3127017196777,2.92972141515835,2.3440060335714,3.14114246384279,3.52938892818609,0.683045484958446,1.94204141212461,0.125896817975577,0,0,0,0,0,0,0,1.43752564364972,43.9590427871269,29.7398478224651,29.2401605253944,0.514518872071894,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0.893811366596314,0.153606533256243,0,0.182975287204819,0,0,0.56276261003168,0.45839474333043,0.294628585473668,0.427115042397309,0.186399445825301,14.4637029266382,15.1898835814639,19.1310562543107,238.337413923844,0,2.69851595818909,0,1.34408066129201,0,0.170430322578058,48.0604108515307,72.0812732001094,13.239281459008,29.5150898052931,0,0,56.2876706629157,51.9387724223952,64.7071289618923,0.22836775943812,0,0.148442139064825,0,0,0,0,0,0.125666591329675,0.247194967734374,0.433798070759735,0,0.161766849947409,0,0.969750506270444,0,0,0,0.255457055208591,9.70502508497954,5.39912457894067,10.8009693012105,0.449371918214468,0.915001205637253,0,0.695297280769106,0.255715457330331,0.41557608911912,0.486723789203273,0,0,0.252722758433675,0.210441855886474,0,0.229902104433473,0,0.150704817835715,0.136072998302656,0,0.187403449119458,0,0.215567992932842,0,0,0,0,0.696504333044333,0,0,11.2354109970118,16.7276139624565,0.284163499395593,0.207125772535502,0,0,0,0,0.771335564436891,0.465067889500816,0,1.28441876603886,0.493679549740441,0.164167464079095,0.162137619091711,0.292399974850665,1.75640092232841,1.20785776884335,0.210289948564127,0.308713837137853,0.330418782983798,0.264450566663544,0.213288250535234,0.232236671860439,0,0,0.22237804384487,0,0,0.658795818896044,0.251335208800269,0,0.19496408711912,0.898819408654221,0,0.199141273254367,0,0.228497025219458,0,0,0.193952487167626,0.280543279561274,0.0632365371242573,0.295220295959204,0.31399745568275,0.616985819609003,0.296452627087149,0.1668451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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:17710 | |||
|HGNC= | |||
|MCL_coexpression_id=415 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q7JCX7 | |||
|association_with_transcript=0bp_to_ENSMUST00000082409_5end | |||
|cluster_id=chrM:8600..8616,+ | |||
|description=CAGE_peak_1_at_COX3_5end | |||
|id=chrM:8600..8616,+ | |||
|ontology_enrichment_celltype=CL:0000063!6.81e-19!66;CL:0000988!6.46e-11!32;CL:0002032!6.46e-11!32;CL:0000037!6.46e-11!32;CL:0000566!6.46e-11!32;CL:0000837!6.46e-11!32;CL:0000144!1.86e-10!121;CL:0000012!1.86e-10!121;CL:0002320!4.22e-10!46;CL:0000134!4.22e-10!46;CL:0002371!1.96e-09!118;CL:0000066!3.75e-09!25;CL:0002031!1.13e-08!25;CL:0000219!1.16e-08!54;CL:0000548!1.66e-08!115;CL:0000004!1.66e-08!115;CL:0000255!1.66e-08!115;CL:0002076!4.34e-07!15;CL:0000838!5.67e-07!12;CL:0000542!7.90e-07!13;CL:0000051!7.90e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,1.37e-20,46;CL:0000134,1.37e-20,46;CL:0000988,2.13e-20,32;CL:0002032,2.13e-20,32;CL:0000037,2.13e-20,32;CL:0000837,2.13e-20,32;CL:0000219,5.20e-20,54;CL:0000066,3.75e-19,25;CL:0002031,6.78e-18,25;CL:0000034,7.38e-15,97;CL:0000223,4.07e-14,20;CL:0002076,7.53e-14,15;CL:0000838,7.95e-12,12;CL:0002563,1.94e-11,9;CL:0002251,1.94e-11,9;CL:0000738,2.75e-11,17;CL:0002087,2.75e-11,17;CL:0000723,5.37e-11,91;CL:0000048,5.37e-11,91;CL:0000049,7.41e-11,19;CL:0000542,1.07e-10,13;CL:0000051,1.07e-10,13;CL:0000791,1.23e-10,9;CL:0000789,1.23e-10,9;CL:0002420,1.23e-10,9;CL:0002419,1.23e-10,9;CL:0000790,1.23e-10,9;CL:0000084,1.35e-10,11;CL:0000827,1.35e-10,11;CL:0000624,1.64e-09,8;CL:0000075,2.16e-09,7;CL:0000239,1.42e-08,6;CL:0000677,1.42e-08,6;CL:0000584,1.42e-08,6;CL:0000763,1.43e-08,16;CL:0000839,1.20e-07,13;CL:0000893,1.94e-07,6;CL:0002489,1.94e-07,6;CL:0000898,1.94e-07,6;CL:0000809,1.94e-07,6;CL:0000810,1.94e-07,6;CL:0000895,1.94e-07,6;CL:0000808,1.94e-07,6;CL:0000894,1.94e-07,6;CL:0000806,1.94e-07,6;CL:0000807,1.94e-07,6;CL:0000805,1.94e-07,6;CL:0002425,1.94e-07,6;CL:0002436,1.94e-07,6;CL:0002427,1.94e-07,6;CL:0002428,1.94e-07,6;CL:0002429,1.94e-07,6;CL:0002433,1.94e-07,6;CL:0002431,1.94e-07,6;CL:0002432,1.94e-07,6;CL:0000050,6.14e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!4.22e-10!46;UBERON:0000344!8.96e-10!15;UBERON:0001242!2.48e-08!13;UBERON:0000060!2.48e-08!13;UBERON:0001262!2.48e-08!13;UBERON:0004786!2.48e-08!13;UBERON:0000485!1.84e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.37e-20,46;UBERON:0000344,5.17e-16,15;UBERON:0001242,2.96e-13,13;UBERON:0001262,2.96e-13,13;UBERON:0004786,2.96e-13,13;UBERON:0000485,4.72e-13,11;UBERON:0003350,1.94e-11,9;UBERON:0004808,1.94e-11,9;UBERON:0001277,1.94e-11,9;UBERON:0004923,1.66e-08,24 | |||
|phase1_expression=8.64803774365887,19.1936474201649,29.5749505603198,108.887116070459,108.193477668411,7.55456723603504,41.1158247448125,15.4947988129892,27.87616698603,22.2361300005894,28.9358366301103,10.6894693053751,18.6608795625014,14.5117868015536,0,25.9168342258977,25.8837894907414,38.1709220083468,33.7301506670117,39.4682376172168,0.17008658030214,0.0992909512008853,45.9711628884526,68.7967418011649,85.3402525569873,41.9189333803965,30.1533397311352,18.3150547783006,92.1613584363413,16.6339885641554,13.9690221712842,6.98533740805594,0,63.3926724061755,17.908800424579,22.275442478038,15.3127017196777,2.92972141515835,2.3440060335714,3.14114246384279,3.52938892818609,0.683045484958446,1.94204141212461,0.125896817975577,0,0,0,0,0,0,0,1.43752564364972,43.9590427871269,29.7398478224651,29.2401605253944,0.514518872071894,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0.893811366596314,0.153606533256243,0,0.182975287204819,0,0,0.56276261003168,0.45839474333043,0.294628585473668,0.427115042397309,0.186399445825301,14.4637029266382,15.1898835814639,19.1310562543107,238.337413923844,0,2.69851595818909,0,1.34408066129201,0,0.170430322578058,48.0604108515307,72.0812732001094,13.239281459008,29.5150898052931,0,0,56.2876706629157,51.9387724223952,64.7071289618923,0.22836775943812,0,0.148442139064825,0,0,0,0,0,0.125666591329675,0.247194967734374,0.433798070759735,0,0.161766849947409,0,0.969750506270444,0,0,0,0.255457055208591,9.70502508497954,5.39912457894067,10.8009693012105,0.449371918214468,0.915001205637253,0,0.695297280769106,0.255715457330331,0.41557608911912,0.486723789203273,0,0,0.252722758433675,0.210441855886474,0,0.229902104433473,0,0.150704817835715,0.136072998302656,0,0.187403449119458,0,0.215567992932842,0,0,0,0,0.696504333044333,0,0,11.2354109970118,16.7276139624565,0.284163499395593,0.207125772535502,0,0,0,0,0.771335564436891,0.465067889500816,0,1.28441876603886,0.493679549740441,0.164167464079095,0.162137619091711,0.292399974850665,1.75640092232841,1.20785776884335,0.210289948564127,0.308713837137853,0.330418782983798,0.264450566663544,0.213288250535234,0.232236671860439,0,0,0.22237804384487,0,0,0.658795818896044,0.251335208800269,0,0.19496408711912,0.898819408654221,0,0.199141273254367,0,0.228497025219458,0,0,0.193952487167626,0.280543279561274,0.0632365371242573,0.295220295959204,0.31399745568275,0.616985819609003,0.296452627087149,0.166845105716094,0.196558995113203,0,0,0,0,0.575392274901621,0.162135226775035,0.274561413188081,0,0,0.312037673114561,0,0.179397413521912,0.482443521363367,0.184753190166605,0,0.325929952884052,0,0,0,0.238043640886014,0,0,0,0.159454768657487,0,0,0.144649058581512,64.8402520938871,66.3564934258826,0,0.275936746304732,0.160550589987792,0.117211686592203,0,0.252470927204373,0,0.390438744296638,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0,0,0.469343416127421,0.21183207086382,0,0,0,0,0.119372344003136,0,0,0.18542530201051,0,0,0.185194527369712,0.188368457004691,0.136694227721025,0,7.47905091972963,4.75834937900437,7.46279858543889,0.954670618015114,0.474503990371703,0,0,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0.259229946583586,0,0,0,0,0,0.129159823477731,0,0.234714477291508,0.13020438484395,0.104859344425711,0,0,0.316011120628178,0.202725215290164,0,0,0.179026695667481,0.198681354781265,0.480781798079875,0.147689527174577,0,0.0762068066549998,0.100826185136841,0.194915761479505,0.192423683280659,0.116876902181569,0,27.7482441717581,25.837590703529,18.4673078000486,0.19318959403219,0,0,0.214368379079066,0,0,0.460325236507177,0.572895513439397,108.611211241211,0.685082519770642,0,0.675022500231806,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0.412070114477788,0,0,0,0,0.187283014939765,0.192075457214608,0.0574354689556133,0,0,0,0.824171801606613,0.294397840268795,0,0,0.238436189947321,0.290692833264657,0.0941093804153306,0,0,0,0,0,0,0.591026894253381,0,0,0,0,0,0.214871054048298,0.765153328275374,0,0 | |||
|short_description=p1@COX3 | |||
}} |
Revision as of 21:27, 5 August 2015
Short description: | p1@COX3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_COX3_5end |
Coexpression cluster: | MCL_coexpression_mm9:415 |
Association with transcript: | 0bp_to_ENSMUST00000082409_5end |
EntrezGene: | 17710 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.37e-20 | 46 |
mucosa | 5.17e-16 | 15 |
intestinal mucosa | 2.96e-13 | 13 |
wall of intestine | 2.96e-13 | 13 |
gastrointestinal system mucosa | 2.96e-13 | 13 |
simple columnar epithelium | 4.72e-13 | 11 |
epithelium of mucosa | 1.94e-11 | 9 |
gastrointestinal system epithelium | 1.94e-11 | 9 |
intestinal epithelium | 1.94e-11 | 9 |
organ component layer | 1.66e-08 | 24 |