FFCP PHASE1:Mm9::chr8:108128941..108128956,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=75687|HGNC=|MCL_coexpression_id=31|UniProt=G5E8A2,Q68FE6|association_with_transcript=-172bp_to_ENSMUST00000043531,NM_001081241,uc009ndj.1_5end|description=CAGE_peak_2_at_Fam65a_5end|id=chr8:108128941..108128956,+|ontology_enrichment_celltype=CL:0000117!4.51e-07!23;CL:0000337!4.51e-07!23|ontology_enrichment_celltype_v019_2=CL:0000120,1.24e-12,3;CL:0000117,1.38e-09,23;CL:0000337,1.38e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0005631,9.07e-28,3;UBERON:0000478,9.07e-28,3;UBERON:0000158,9.07e-28,3;UBERON:0001987,4.66e-19,2;UBERON:0003124,4.66e-19,2;UBERON:0004340,4.66e-19,2;UBERON:0000305,2.01e-10,1;UBERON:0002420,2.34e-10,8;UBERON:0007245,2.34e-10,8;UBERON:0010009,2.34e-10,8;UBERON:0010011,2.34e-10,8;UBERON:0000454,2.34e-10,8;UBERON:0005795,5.10e-10,4;UBERON:0000995,5.10e-10,4;UBERON:0003975,3.41e-08,5;UBERON:0000369,7.62e-08,5;UBERON:0002435,7.62e-08,5;UBERON:0000204,7.62e-08,5;UBERON:0010082,7.62e-08,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0.137114433605739,0,0.0850432901510698,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.219686182734472,0,0.419959264876088,0,0,0,0,0,0,0,1.01158230429799,0.528990979272033,1.90149421051854,0.338844532069132,0.889294796111139,0,0,0,0,0,0.103689612308478,0.270011876663381,0,0.285650984403804,0,0.244981598429908,0.0958454710182364,0,0,0.510749352340751,0.153606533256243,0.791317726381163,1.55528994124096,0.52091337055676,0.279182999001381,1.12552522006336,0.15279824777681,0.589257170947335,0.427115042397309,1.1183966749518,0.075726193333184,0,0,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0,0,0.29688427812965,0,0,0,0.301445281105245,0.470354828542819,0,2.22475470960936,0.578397427679647,0,0.161766849947409,0,0,0,0,0.41889341362691,0.255457055208591,0.958520996047362,0,0.127070227073065,0,0,1.00523481690292,0.173824320192276,0.511430914660661,0.20778804455956,0.324482526135515,0.203678727700633,0.124406970610093,0,0.210441855886474,0,0,0,0,0.272145996605311,0.512454881139399,0.468508622798644,0,0,0,0.175951124163949,0,0,0,0,0,0,0.51469581422943,0.568326998791185,0.207125772535502,0.234526059981096,0,0,0,0.154267112887378,0,0,0.467061369468678,0.16455984991348,0,0.324275238183423,0.292399974850665,0.219550115291051,0.402619256281115,0,0.308713837137853,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0.203651327845314,0,0.210407459670956,0.189709611372772,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0,0,0,0.241177159752417,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0.554259570499814,0,0.162964976442026,0.169745085775188,0.234690248288502,0,0,0,0.315270288212382,0.44292937929755,0.159454768657487,0.491589944147214,0,0,0,0,0,0.275936746304732,0.642202359951168,0.35163505977661,0,0.252470927204373,0.315508219416257,0,0.430846795465598,0,0,0,0,0,0,0.642642632843614,0,0,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0.388076051348264,0,0,0,0,0,1.64270195644597,9.53244318887191,0.220528398054962,0.16488625294148,0.484393280087717,0,0.119372344003136,0.164140899745061,0,0.741701208042039,0,0,0.370389054739423,0,0,0,0.339956859987711,0.279902904647316,0.276399947608848,0,0,0,0,0,0.218362563746178,0.269728692769641,0,0,0,0,0,0,0.330916980914195,0,0,0,0.117357238645754,0.2604087696879,0,0,0,0,0,0.102710957164827,0,0,0,0,0.295379054349154,0,0.304827226619999,0,0.0974578807397524,0.192423683280659,0.233753804363138,0,0.221985953374065,0.358855426437903,0,0.19318959403219,0.375364950902364,0,0,0,0,0,1.14579102687879,0.171853182343688,0.685082519770642,0,0,0,0.453142408984205,0,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0.735374033800057,0.222246727801615,0.618105171716683,0,0,0.25347929989024,0.565879024158229,0.280924522409647,0.320125762024346,0.34461281373368,0.952587382566147,0.115884325944855,0,0,0.294397840268795,0,0.177475806159338,0.238436189947321,0.145346416632329,0.188218760830661,0.25384382367503,0,0,0.407412341537585,0,0,0.197008964751127,0.409231043169689,0.309873682371932,0,0.749431733813838,0.467863216890817,0.429742108096597,0.57386499620653,0.220591419119515,0|short_description=p2@Fam65a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:75687 | |||
|HGNC= | |||
|MCL_coexpression_id=31 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G5E8A2,uniprot:Q68FE6 | |||
|association_with_transcript=-172bp_to_ENSMUST00000043531,NM_001081241,uc009ndj.1_5end | |||
|cluster_id=chr8:108128941..108128956,+ | |||
|description=CAGE_peak_2_at_Fam65a_5end | |||
|id=chr8:108128941..108128956,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.51e-07!23;CL:0000337!4.51e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000120,1.24e-12,3;CL:0000117,1.38e-09,23;CL:0000337,1.38e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,9.07e-28,3;UBERON:0000478,9.07e-28,3;UBERON:0000158,9.07e-28,3;UBERON:0001987,4.66e-19,2;UBERON:0003124,4.66e-19,2;UBERON:0004340,4.66e-19,2;UBERON:0000305,2.01e-10,1;UBERON:0002420,2.34e-10,8;UBERON:0007245,2.34e-10,8;UBERON:0010009,2.34e-10,8;UBERON:0010011,2.34e-10,8;UBERON:0000454,2.34e-10,8;UBERON:0005795,5.10e-10,4;UBERON:0000995,5.10e-10,4;UBERON:0003975,3.41e-08,5;UBERON:0000369,7.62e-08,5;UBERON:0002435,7.62e-08,5;UBERON:0000204,7.62e-08,5;UBERON:0010082,7.62e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0.137114433605739,0,0.0850432901510698,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.219686182734472,0,0.419959264876088,0,0,0,0,0,0,0,1.01158230429799,0.528990979272033,1.90149421051854,0.338844532069132,0.889294796111139,0,0,0,0,0,0.103689612308478,0.270011876663381,0,0.285650984403804,0,0.244981598429908,0.0958454710182364,0,0,0.510749352340751,0.153606533256243,0.791317726381163,1.55528994124096,0.52091337055676,0.279182999001381,1.12552522006336,0.15279824777681,0.589257170947335,0.427115042397309,1.1183966749518,0.075726193333184,0,0,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0,0,0.29688427812965,0,0,0,0.301445281105245,0.470354828542819,0,2.22475470960936,0.578397427679647,0,0.161766849947409,0,0,0,0,0.41889341362691,0.255457055208591,0.958520996047362,0,0.127070227073065,0,0,1.00523481690292,0.173824320192276,0.511430914660661,0.20778804455956,0.324482526135515,0.203678727700633,0.124406970610093,0,0.210441855886474,0,0,0,0,0.272145996605311,0.512454881139399,0.468508622798644,0,0,0,0.175951124163949,0,0,0,0,0,0,0.51469581422943,0.568326998791185,0.207125772535502,0.234526059981096,0,0,0,0.154267112887378,0,0,0.467061369468678,0.16455984991348,0,0.324275238183423,0.292399974850665,0.219550115291051,0.402619256281115,0,0.308713837137853,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0.203651327845314,0,0.210407459670956,0.189709611372772,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0,0,0,0.241177159752417,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0.554259570499814,0,0.162964976442026,0.169745085775188,0.234690248288502,0,0,0,0.315270288212382,0.44292937929755,0.159454768657487,0.491589944147214,0,0,0,0,0,0.275936746304732,0.642202359951168,0.35163505977661,0,0.252470927204373,0.315508219416257,0,0.430846795465598,0,0,0,0,0,0,0.642642632843614,0,0,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0.388076051348264,0,0,0,0,0,1.64270195644597,9.53244318887191,0.220528398054962,0.16488625294148,0.484393280087717,0,0.119372344003136,0.164140899745061,0,0.741701208042039,0,0,0.370389054739423,0,0,0,0.339956859987711,0.279902904647316,0.276399947608848,0,0,0,0,0,0.218362563746178,0.269728692769641,0,0,0,0,0,0,0.330916980914195,0,0,0,0.117357238645754,0.2604087696879,0,0,0,0,0,0.102710957164827,0,0,0,0,0.295379054349154,0,0.304827226619999,0,0.0974578807397524,0.192423683280659,0.233753804363138,0,0.221985953374065,0.358855426437903,0,0.19318959403219,0.375364950902364,0,0,0,0,0,1.14579102687879,0.171853182343688,0.685082519770642,0,0,0,0.453142408984205,0,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0.735374033800057,0.222246727801615,0.618105171716683,0,0,0.25347929989024,0.565879024158229,0.280924522409647,0.320125762024346,0.34461281373368,0.952587382566147,0.115884325944855,0,0,0.294397840268795,0,0.177475806159338,0.238436189947321,0.145346416632329,0.188218760830661,0.25384382367503,0,0,0.407412341537585,0,0,0.197008964751127,0.409231043169689,0.309873682371932,0,0.749431733813838,0.467863216890817,0.429742108096597,0.57386499620653,0.220591419119515,0 | |||
|short_description=p2@Fam65a | |||
}} |
Revision as of 20:02, 5 August 2015
Short description: | p2@Fam65a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Fam65a_5end |
Coexpression cluster: | MCL_coexpression_mm9:31 |
Association with transcript: | -172bp_to_ENSMUST00000043531, NM_001081241, uc009ndj.1_5end |
EntrezGene: | 75687 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granule cell | 1.24e-12 | 3 |
CNS neuron (sensu Vertebrata) | 1.38e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.38e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 9.07e-28 | 3 |
extraembryonic structure | 9.07e-28 | 3 |
membranous layer | 9.07e-28 | 3 |
placenta | 4.66e-19 | 2 |
chorion | 4.66e-19 | 2 |
allantois | 4.66e-19 | 2 |
amnion | 2.01e-10 | 1 |
basal ganglion | 2.34e-10 | 8 |
nuclear complex of neuraxis | 2.34e-10 | 8 |
aggregate regional part of brain | 2.34e-10 | 8 |
collection of basal ganglia | 2.34e-10 | 8 |
cerebral subcortex | 2.34e-10 | 8 |
embryonic uterus | 5.10e-10 | 4 |
uterus | 5.10e-10 | 4 |
internal female genitalia | 3.41e-08 | 5 |
corpus striatum | 7.62e-08 | 5 |
striatum | 7.62e-08 | 5 |
ventral part of telencephalon | 7.62e-08 | 5 |
future corpus striatum | 7.62e-08 | 5 |