FFCP PHASE1:Mm9::chr6:4853057..4853068,+: Difference between revisions
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{{FFCP|EntrezGene=243725|HGNC=|MCL_coexpression_id=16|UniProt=Q7TN74|association_with_transcript=-251bp_to_ENSMUST00000035813,NM_181595,uc009avy.1,uc009avz.1_5end|description=CAGE_peak_9_at_Ppp1r9a_5end|id=chr6:4853057..4853068,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001444!2.64e-11!11;UBERON:0000970!1.05e-09!9;UBERON:0000019!1.05e-09!9;UBERON:0000047!1.05e-09!9;UBERON:0004088!1.05e-09!9;UBERON:0002104!1.05e-09!9;UBERON:0001456!1.05e-09!9;UBERON:0003072!1.05e-09!9;UBERON:0003071!1.05e-09!9;UBERON:0004128!1.05e-09!9;UBERON:0000020!3.29e-09!12;UBERON:0001032!3.29e-09!12;UBERON:0004456!3.29e-09!12;UBERON:0000033!1.49e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0000970,8.81e-31,9;UBERON:0000019,8.81e-31,9;UBERON:0000047,8.81e-31,9;UBERON:0010312,8.81e-31,9;UBERON:0004088,8.81e-31,9;UBERON:0002104,8.81e-31,9;UBERON:0001456,8.81e-31,9;UBERON:0003072,8.81e-31,9;UBERON:0004128,8.81e-31,9;UBERON:0003071,8.81e-31,9;UBERON:0001444,2.91e-25,11;UBERON:0000020,3.43e-23,12;UBERON:0001032,3.43e-23,12;UBERON:0004456,3.43e-23,12;UBERON:0000033,1.95e-21,13;UBERON:0005085,1.95e-21,13;UBERON:0003056,5.25e-11,49;UBERON:0002346,2.08e-08,64;UBERON:0003075,2.08e-08,64;UBERON:0007284,2.08e-08,64;UBERON:0007811,6.85e-08,36;UBERON:0010371,2.35e-07,73;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,1.10115880999389,0,0.153606533256243,0.131886287730194,0,0,0.279182999001381,0.56276261003168,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0.150722640552623,0,0.125666591329675,0,0,0,0.161766849947409,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,0,0.915001205637253,0,0.173824320192276,0,0.20778804455956,0.162241263067758,0,0.248813941220186,0,1.68353484709179,0.520481771850815,0.919608417733892,0.900310649026746,1.35634336052144,0.476255494059295,1.40925092313335,2.43624483855295,4.9153640440413,0.215567992932842,0.378212160335639,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0.36012412292203,0.473489471170421,0.196764231747404,0.308534225774757,0.465067889500816,0,0.116765342367169,0.16455984991348,0,0.243206428637567,0.146199987425332,0,0,0.210289948564127,0.205809224758569,0,0,0.213288250535234,0.464473343720877,0.257734922644187,0.201683524623343,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0,0.342745537829186,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0,0.156998727841375,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0.339490171550376,0,0.335012514883631,0.476087281772027,0,0.157635144106191,0,0.318909537314974,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,0.160550589987792,0.586058432961016,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0.963963949265421,0.283880170416537,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0,0.356497378384721,0,0,0,2.04263763452273,0.18006109403131,0.258717367565509,0,1.24138163549592,0.891844088010353,0.329098041204242,0,0,0,0.220528398054962,0,0.161464426695906,0.0603129249281559,0,0,0,0.18542530201051,0,0,0,0,0,0.228778173206523,0,0,0,0,0.316335993581135,0.609958401380546,0.108005340821801,0.209088296014469,0.218362563746178,0,0,0,0.129614973291793,0.621339313086926,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0.168956125490778,0.117357238645754,0.2604087696879,0.314578033277133,0,0,0,0,0.205421914329655,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0,0.183843508450014,0,0,0,0.505394423527595,0,0.188626341386076,0.468207537349412,0.128050304809739,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0.441596760403192,0,0.177475806159338,0.238436189947321,0.145346416632329,0.282328141245992,0.25384382367503,0.365855945745545,0.526139422875686,0.271608227691724,0,0.237270036248348,0.29551344712669,0,0,0,0,0.233931608445408,0,0.191288332068843,0.220591419119515,0|short_description=p9@Ppp1r9a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:243725 | |||
|HGNC= | |||
|MCL_coexpression_id=16 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q7TN74 | |||
|association_with_transcript=-251bp_to_ENSMUST00000035813,NM_181595,uc009avy.1,uc009avz.1_5end | |||
|cluster_id=chr6:4853057..4853068,+ | |||
|description=CAGE_peak_9_at_Ppp1r9a_5end | |||
|id=chr6:4853057..4853068,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001444!2.64e-11!11;UBERON:0000970!1.05e-09!9;UBERON:0000019!1.05e-09!9;UBERON:0000047!1.05e-09!9;UBERON:0004088!1.05e-09!9;UBERON:0002104!1.05e-09!9;UBERON:0001456!1.05e-09!9;UBERON:0003072!1.05e-09!9;UBERON:0003071!1.05e-09!9;UBERON:0004128!1.05e-09!9;UBERON:0000020!3.29e-09!12;UBERON:0001032!3.29e-09!12;UBERON:0004456!3.29e-09!12;UBERON:0000033!1.49e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,8.81e-31,9;UBERON:0000019,8.81e-31,9;UBERON:0000047,8.81e-31,9;UBERON:0010312,8.81e-31,9;UBERON:0004088,8.81e-31,9;UBERON:0002104,8.81e-31,9;UBERON:0001456,8.81e-31,9;UBERON:0003072,8.81e-31,9;UBERON:0004128,8.81e-31,9;UBERON:0003071,8.81e-31,9;UBERON:0001444,2.91e-25,11;UBERON:0000020,3.43e-23,12;UBERON:0001032,3.43e-23,12;UBERON:0004456,3.43e-23,12;UBERON:0000033,1.95e-21,13;UBERON:0005085,1.95e-21,13;UBERON:0003056,5.25e-11,49;UBERON:0002346,2.08e-08,64;UBERON:0003075,2.08e-08,64;UBERON:0007284,2.08e-08,64;UBERON:0007811,6.85e-08,36;UBERON:0010371,2.35e-07,73;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,1.10115880999389,0,0.153606533256243,0.131886287730194,0,0,0.279182999001381,0.56276261003168,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0.150722640552623,0,0.125666591329675,0,0,0,0.161766849947409,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,0,0.915001205637253,0,0.173824320192276,0,0.20778804455956,0.162241263067758,0,0.248813941220186,0,1.68353484709179,0.520481771850815,0.919608417733892,0.900310649026746,1.35634336052144,0.476255494059295,1.40925092313335,2.43624483855295,4.9153640440413,0.215567992932842,0.378212160335639,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0.36012412292203,0.473489471170421,0.196764231747404,0.308534225774757,0.465067889500816,0,0.116765342367169,0.16455984991348,0,0.243206428637567,0.146199987425332,0,0,0.210289948564127,0.205809224758569,0,0,0.213288250535234,0.464473343720877,0.257734922644187,0.201683524623343,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0,0.342745537829186,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0,0.156998727841375,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0.339490171550376,0,0.335012514883631,0.476087281772027,0,0.157635144106191,0,0.318909537314974,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,0.160550589987792,0.586058432961016,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0.963963949265421,0.283880170416537,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0,0.356497378384721,0,0,0,2.04263763452273,0.18006109403131,0.258717367565509,0,1.24138163549592,0.891844088010353,0.329098041204242,0,0,0,0.220528398054962,0,0.161464426695906,0.0603129249281559,0,0,0,0.18542530201051,0,0,0,0,0,0.228778173206523,0,0,0,0,0.316335993581135,0.609958401380546,0.108005340821801,0.209088296014469,0.218362563746178,0,0,0,0.129614973291793,0.621339313086926,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0.168956125490778,0.117357238645754,0.2604087696879,0.314578033277133,0,0,0,0,0.205421914329655,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0,0.183843508450014,0,0,0,0.505394423527595,0,0.188626341386076,0.468207537349412,0.128050304809739,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0.441596760403192,0,0.177475806159338,0.238436189947321,0.145346416632329,0.282328141245992,0.25384382367503,0.365855945745545,0.526139422875686,0.271608227691724,0,0.237270036248348,0.29551344712669,0,0,0,0,0.233931608445408,0,0.191288332068843,0.220591419119515,0 | |||
|short_description=p9@Ppp1r9a | |||
}} |
Revision as of 19:57, 5 August 2015
Short description: | p9@Ppp1r9a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Ppp1r9a_5end |
Coexpression cluster: | MCL_coexpression_mm9:16 |
Association with transcript: | -251bp_to_ENSMUST00000035813, NM_181595, uc009avy.1, uc009avz.1_5end |
EntrezGene: | 243725 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 8.81e-31 | 9 |
camera-type eye | 8.81e-31 | 9 |
simple eye | 8.81e-31 | 9 |
immature eye | 8.81e-31 | 9 |
ocular region | 8.81e-31 | 9 |
visual system | 8.81e-31 | 9 |
face | 8.81e-31 | 9 |
optic cup | 8.81e-31 | 9 |
optic vesicle | 8.81e-31 | 9 |
eye primordium | 8.81e-31 | 9 |
subdivision of head | 2.91e-25 | 11 |
sense organ | 3.43e-23 | 12 |
sensory system | 3.43e-23 | 12 |
entire sense organ system | 3.43e-23 | 12 |
head | 1.95e-21 | 13 |
ectodermal placode | 1.95e-21 | 13 |
pre-chordal neural plate | 5.25e-11 | 49 |
neurectoderm | 2.08e-08 | 64 |
neural plate | 2.08e-08 | 64 |
presumptive neural plate | 2.08e-08 | 64 |
craniocervical region | 6.85e-08 | 36 |
ecto-epithelium | 2.35e-07 | 73 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |