FFCP PHASE1:Mm9::chr11:32036107..32036145,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=204|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:32036107..32036145,-|id=chr11:32036107..32036145,-|ontology_enrichment_celltype=CL:0000117!1.13e-18!23;CL:0000337!1.13e-18!23;CL:0002319!9.00e-16!43;CL:0000221!2.78e-15!44;CL:0000133!2.78e-15!44;CL:0000055!9.15e-13!50;CL:0000540!1.00e-11!33;CL:0000047!1.00e-11!33;CL:0000031!1.00e-11!33;CL:0000404!1.00e-11!33;CL:0000393!2.71e-09!39;CL:0000211!2.71e-09!39;CL:0002321!1.45e-07!70;CL:0000220!1.45e-07!70|ontology_enrichment_celltype_v019_2=CL:0002611,3.19e-26,2;CL:0000878,7.61e-26,2;CL:0000129,7.61e-26,2;CL:0002612,1.59e-17,3;CL:0002453,1.17e-14,8;CL:0002319,2.01e-14,43;CL:0000221,4.23e-14,44;CL:0000133,4.23e-14,44;CL:0002194,1.80e-13,4;CL:0000766,1.80e-13,4;CL:0000234,1.80e-13,4;CL:0000576,1.80e-13,4;CL:0000235,1.80e-13,4;CL:0000864,1.80e-13,4;CL:0002009,1.80e-13,4;CL:0000040,1.80e-13,4;CL:0000559,1.80e-13,4;CL:0000333,7.07e-12,10;CL:0000095,7.07e-12,10;CL:0000243,7.07e-12,10;CL:0000123,7.07e-12,10;CL:0000125,7.07e-12,10;CL:0000030,7.07e-12,10;CL:0000339,7.07e-12,10;CL:0000117,3.24e-09,23;CL:0000337,3.24e-09,23;CL:0002321,6.38e-09,70;CL:0000473,4.11e-08,7;CL:0000557,4.11e-08,7;CL:0002603,2.03e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.98e-17!73;UBERON:0005743!2.98e-17!73;UBERON:0000073!1.40e-16!75;UBERON:0001016!1.40e-16!75;UBERON:0001049!3.24e-14!52;UBERON:0005068!3.24e-14!52;UBERON:0006241!3.24e-14!52;UBERON:0007135!3.24e-14!52;UBERON:0000955!7.38e-12!50;UBERON:0006238!7.38e-12!50;UBERON:0002020!2.53e-11!34;UBERON:0002616!9.06e-11!49;UBERON:0004121!3.91e-10!102;UBERON:0000924!3.91e-10!102;UBERON:0006601!3.91e-10!102;UBERON:0003076!1.68e-09!12;UBERON:0003057!1.68e-09!12;UBERON:0002240!7.57e-09!6;UBERON:0005174!7.57e-09!6;UBERON:0001137!7.57e-09!6;UBERON:0002346!7.93e-09!71;UBERON:0003075!7.93e-09!71;UBERON:0007284!7.93e-09!71;UBERON:0000033!2.54e-08!63;UBERON:0002298!1.18e-07!6;UBERON:0001948!1.72e-07!5;UBERON:0002315!1.72e-07!5;UBERON:0003080!2.41e-07!40;UBERON:0001954!5.32e-07!7;UBERON:0003022!5.32e-07!7;UBERON:0002421!5.32e-07!7;UBERON:0000349!5.32e-07!7;UBERON:0002600!5.32e-07!7;UBERON:0002791!5.43e-07!29;UBERON:0003528!5.43e-07!29;UBERON:0001893!5.43e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0001948,2.32e-40,5;UBERON:0002315,2.32e-40,5;UBERON:0002240,9.27e-34,6;UBERON:0005174,9.27e-34,6;UBERON:0001137,9.27e-34,6;UBERON:0003076,3.03e-26,12;UBERON:0003057,3.03e-26,12;UBERON:0002256,3.19e-26,2;UBERON:0002257,1.59e-17,3;UBERON:0000489,4.74e-10,21;UBERON:0001017,1.47e-08,73;UBERON:0001016,2.47e-08,75|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,0.659058548203415,0.388859798148567,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,1.19840044207362,15.3687322128622,0.311068836925433,0.405017814995072,0.210324961351382,2.85650984403804,2.42955395046775,0.367472397644862,0,0,0,0.638436690425939,0.46081959976873,0.263772575460388,0.0914876436024097,0,0.558365998002762,0,0.45839474333043,1.47314292736834,1.56608848879013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599162557619291,0,0,0,0,0.20778804455956,0.324482526135515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.92614151141356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0,0.187283014939765,0.0640251524048693,0.114870937911227,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0,0.182927972872773,0.263069711437843,0,0.561142271657738,0.118635018124174,0.0985044823755635,0.409231043169689,0,0,0,0,0,0,0,0|short_description=p@chr11:32036107..32036145,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=204 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:32036107..32036145,- | |||
|description=CAGE_peak_at_chr11:32036107..32036145,- | |||
|id=chr11:32036107..32036145,- | |||
|ontology_enrichment_celltype=CL:0000117!1.13e-18!23;CL:0000337!1.13e-18!23;CL:0002319!9.00e-16!43;CL:0000221!2.78e-15!44;CL:0000133!2.78e-15!44;CL:0000055!9.15e-13!50;CL:0000540!1.00e-11!33;CL:0000047!1.00e-11!33;CL:0000031!1.00e-11!33;CL:0000404!1.00e-11!33;CL:0000393!2.71e-09!39;CL:0000211!2.71e-09!39;CL:0002321!1.45e-07!70;CL:0000220!1.45e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002611,3.19e-26,2;CL:0000878,7.61e-26,2;CL:0000129,7.61e-26,2;CL:0002612,1.59e-17,3;CL:0002453,1.17e-14,8;CL:0002319,2.01e-14,43;CL:0000221,4.23e-14,44;CL:0000133,4.23e-14,44;CL:0002194,1.80e-13,4;CL:0000766,1.80e-13,4;CL:0000234,1.80e-13,4;CL:0000576,1.80e-13,4;CL:0000235,1.80e-13,4;CL:0000864,1.80e-13,4;CL:0002009,1.80e-13,4;CL:0000040,1.80e-13,4;CL:0000559,1.80e-13,4;CL:0000333,7.07e-12,10;CL:0000095,7.07e-12,10;CL:0000243,7.07e-12,10;CL:0000123,7.07e-12,10;CL:0000125,7.07e-12,10;CL:0000030,7.07e-12,10;CL:0000339,7.07e-12,10;CL:0000117,3.24e-09,23;CL:0000337,3.24e-09,23;CL:0002321,6.38e-09,70;CL:0000473,4.11e-08,7;CL:0000557,4.11e-08,7;CL:0002603,2.03e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.98e-17!73;UBERON:0005743!2.98e-17!73;UBERON:0000073!1.40e-16!75;UBERON:0001016!1.40e-16!75;UBERON:0001049!3.24e-14!52;UBERON:0005068!3.24e-14!52;UBERON:0006241!3.24e-14!52;UBERON:0007135!3.24e-14!52;UBERON:0000955!7.38e-12!50;UBERON:0006238!7.38e-12!50;UBERON:0002020!2.53e-11!34;UBERON:0002616!9.06e-11!49;UBERON:0004121!3.91e-10!102;UBERON:0000924!3.91e-10!102;UBERON:0006601!3.91e-10!102;UBERON:0003076!1.68e-09!12;UBERON:0003057!1.68e-09!12;UBERON:0002240!7.57e-09!6;UBERON:0005174!7.57e-09!6;UBERON:0001137!7.57e-09!6;UBERON:0002346!7.93e-09!71;UBERON:0003075!7.93e-09!71;UBERON:0007284!7.93e-09!71;UBERON:0000033!2.54e-08!63;UBERON:0002298!1.18e-07!6;UBERON:0001948!1.72e-07!5;UBERON:0002315!1.72e-07!5;UBERON:0003080!2.41e-07!40;UBERON:0001954!5.32e-07!7;UBERON:0003022!5.32e-07!7;UBERON:0002421!5.32e-07!7;UBERON:0000349!5.32e-07!7;UBERON:0002600!5.32e-07!7;UBERON:0002791!5.43e-07!29;UBERON:0003528!5.43e-07!29;UBERON:0001893!5.43e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,2.32e-40,5;UBERON:0002315,2.32e-40,5;UBERON:0002240,9.27e-34,6;UBERON:0005174,9.27e-34,6;UBERON:0001137,9.27e-34,6;UBERON:0003076,3.03e-26,12;UBERON:0003057,3.03e-26,12;UBERON:0002256,3.19e-26,2;UBERON:0002257,1.59e-17,3;UBERON:0000489,4.74e-10,21;UBERON:0001017,1.47e-08,73;UBERON:0001016,2.47e-08,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,0.659058548203415,0.388859798148567,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,1.19840044207362,15.3687322128622,0.311068836925433,0.405017814995072,0.210324961351382,2.85650984403804,2.42955395046775,0.367472397644862,0,0,0,0.638436690425939,0.46081959976873,0.263772575460388,0.0914876436024097,0,0.558365998002762,0,0.45839474333043,1.47314292736834,1.56608848879013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599162557619291,0,0,0,0,0.20778804455956,0.324482526135515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.92614151141356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0,0.187283014939765,0.0640251524048693,0.114870937911227,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0,0.182927972872773,0.263069711437843,0,0.561142271657738,0.118635018124174,0.0985044823755635,0.409231043169689,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:32036107..32036145,- | |||
}} |
Latest revision as of 19:37, 5 August 2015
Short description: | p@chr11:32036107..32036145, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:32036107..32036145, - |
Coexpression cluster: | MCL_coexpression_mm9:204 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the dorsal spinal cord | 3.19e-26 | 2 |
central nervous system macrophage | 7.61e-26 | 2 |
microglial cell | 7.61e-26 | 2 |
neuron of the ventral spinal cord | 1.59e-17 | 3 |
oligodendrocyte precursor cell | 1.17e-14 | 8 |
neural cell | 2.01e-14 | 43 |
ectodermal cell | 4.23e-14 | 44 |
neurectodermal cell | 4.23e-14 | 44 |
monopoietic cell | 1.80e-13 | 4 |
myeloid leukocyte | 1.80e-13 | 4 |
phagocyte | 1.80e-13 | 4 |
monocyte | 1.80e-13 | 4 |
macrophage | 1.80e-13 | 4 |
tissue-resident macrophage | 1.80e-13 | 4 |
macrophage dendritic cell progenitor | 1.80e-13 | 4 |
monoblast | 1.80e-13 | 4 |
promonocyte | 1.80e-13 | 4 |
migratory neural crest cell | 7.07e-12 | 10 |
neuron associated cell | 7.07e-12 | 10 |
glial cell (sensu Vertebrata) | 7.07e-12 | 10 |
neuron associated cell (sensu Vertebrata) | 7.07e-12 | 10 |
glial cell | 7.07e-12 | 10 |
glioblast | 7.07e-12 | 10 |
glioblast (sensu Vertebrata) | 7.07e-12 | 10 |
CNS neuron (sensu Vertebrata) | 3.24e-09 | 23 |
neuroblast (sensu Vertebrata) | 3.24e-09 | 23 |
embryonic cell | 6.38e-09 | 70 |
defensive cell | 4.11e-08 | 7 |
granulocyte monocyte progenitor cell | 4.11e-08 | 7 |
astrocyte of the cerebellum | 2.03e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 2.32e-40 | 5 |
gray matter of spinal cord | 2.32e-40 | 5 |
spinal cord | 9.27e-34 | 6 |
dorsal region element | 9.27e-34 | 6 |
dorsum | 9.27e-34 | 6 |
posterior neural tube | 3.03e-26 | 12 |
chordal neural plate | 3.03e-26 | 12 |
dorsal horn of spinal cord | 3.19e-26 | 2 |
ventral horn of spinal cord | 1.59e-17 | 3 |
cavitated compound organ | 4.74e-10 | 21 |
central nervous system | 1.47e-08 | 73 |
nervous system | 2.47e-08 | 75 |