FFCP PHASE1:Mm9::chr4:88920480..88920487,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=600|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:88920480..88920487,-|id=chr4:88920480..88920487,-|ontology_enrichment_celltype=CL:0000192!9.40e-10!3;CL:0000359!9.40e-10!3;CL:0002539!9.40e-10!3;CL:0000514!9.40e-10!3;CL:0002092!1.89e-09!3;CL:0002540!1.89e-09!3;CL:0000548!2.23e-09!115;CL:0000004!2.23e-09!115;CL:0000255!2.23e-09!115;CL:0002371!5.35e-09!118;CL:0000349!1.19e-08!3;CL:0000351!1.19e-08!3;CL:0000144!1.23e-08!121;CL:0000012!1.23e-08!121;CL:0002453!2.47e-08!8;CL:0000128!2.34e-07!6;CL:0000126!2.34e-07!6;CL:0000127!2.34e-07!6;CL:0000107!5.15e-07!9;CL:0000034!8.98e-07!97|ontology_enrichment_celltype_v019_2=CL:0000192,3.67e-34,3;CL:0000359,3.67e-34,3;CL:0002539,3.67e-34,3;CL:0000514,3.67e-34,3;CL:0002092,5.97e-33,3;CL:0002540,5.97e-33,3;CL:0000680,1.70e-17,6;CL:0000187,1.70e-17,6;CL:0000056,1.70e-17,6;CL:0000222,4.19e-15,7;CL:0000355,6.65e-12,9;CL:0000128,4.03e-08,6;CL:0000126,4.03e-08,6;CL:0000127,4.03e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001135!9.40e-10!3;UBERON:0004237!9.40e-10!3;UBERON:0004695!9.40e-10!3;UBERON:0002111!9.40e-10!3;UBERON:0004178!9.40e-10!3;UBERON:0000358!1.19e-08!3;UBERON:0000307!1.19e-08!3;UBERON:0000947!2.19e-07!4;UBERON:0001637!2.19e-07!4;UBERON:0003509!2.19e-07!4;UBERON:0004573!2.19e-07!4;UBERON:0004571!2.19e-07!4;UBERON:0010191!2.19e-07!4;UBERON:0004572!2.19e-07!4;UBERON:0002410!5.15e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0001135,3.67e-34,3;UBERON:0004237,3.67e-34,3;UBERON:0004695,3.67e-34,3;UBERON:0002111,3.67e-34,3;UBERON:0004178,3.67e-34,3;UBERON:0000947,7.67e-26,4;UBERON:0001637,7.67e-26,4;UBERON:0004573,7.67e-26,4;UBERON:0003509,7.67e-26,4;UBERON:0004571,7.67e-26,4;UBERON:0010191,7.67e-26,4;UBERON:0004572,7.67e-26,4;UBERON:0000055,7.72e-21,5;UBERON:0007500,7.72e-21,5;UBERON:0001981,7.72e-21,5;UBERON:0002049,7.72e-21,5;UBERON:0007798,7.72e-21,5;UBERON:0004537,7.72e-21,5;UBERON:0006965,7.72e-21,5;UBERON:0002204,1.71e-12,32;UBERON:0001134,6.65e-12,9;UBERON:0002036,6.65e-12,9;UBERON:0002385,6.65e-12,9;UBERON:0000486,6.65e-12,9;UBERON:0007503,6.65e-12,9;UBERON:0001015,6.65e-12,9;UBERON:0002329,6.65e-12,9;UBERON:0003082,6.65e-12,9;UBERON:0003059,6.65e-12,9;UBERON:0007282,6.65e-12,9;UBERON:0004290,6.65e-12,9;UBERON:0009618,6.65e-12,9;UBERON:0000383,8.83e-11,10;UBERON:0007524,7.37e-10,11;UBERON:0003077,7.37e-10,11;UBERON:0007285,7.37e-10,11;UBERON:0002371,9.62e-07,16|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.54663453473002,5.5757312170733,4.77221555620372,1.56478268869608,0,0,0.388859798148567,0.139986421625363,1.43752564364972,0,0,0,0,0,0,0,0,0,0.338844532069132,0.889294796111139,1.7997994345628,2.96659908770092,1.4209602298922,0.898800331555214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0.519572009205738,0,0,0,0,0,0,0.506719730950197,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.631016438832513,0,0.215423397732799,0,0.445597348164788,0.283076530788832,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0.299033092087958,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443971906748129,0.538283139656854,0.335769232728157,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr4:88920480..88920487,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=600 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:88920480..88920487,- | |||
|description=CAGE_peak_at_chr4:88920480..88920487,- | |||
|id=chr4:88920480..88920487,- | |||
|ontology_enrichment_celltype=CL:0000192!9.40e-10!3;CL:0000359!9.40e-10!3;CL:0002539!9.40e-10!3;CL:0000514!9.40e-10!3;CL:0002092!1.89e-09!3;CL:0002540!1.89e-09!3;CL:0000548!2.23e-09!115;CL:0000004!2.23e-09!115;CL:0000255!2.23e-09!115;CL:0002371!5.35e-09!118;CL:0000349!1.19e-08!3;CL:0000351!1.19e-08!3;CL:0000144!1.23e-08!121;CL:0000012!1.23e-08!121;CL:0002453!2.47e-08!8;CL:0000128!2.34e-07!6;CL:0000126!2.34e-07!6;CL:0000127!2.34e-07!6;CL:0000107!5.15e-07!9;CL:0000034!8.98e-07!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.67e-34,3;CL:0000359,3.67e-34,3;CL:0002539,3.67e-34,3;CL:0000514,3.67e-34,3;CL:0002092,5.97e-33,3;CL:0002540,5.97e-33,3;CL:0000680,1.70e-17,6;CL:0000187,1.70e-17,6;CL:0000056,1.70e-17,6;CL:0000222,4.19e-15,7;CL:0000355,6.65e-12,9;CL:0000128,4.03e-08,6;CL:0000126,4.03e-08,6;CL:0000127,4.03e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001135!9.40e-10!3;UBERON:0004237!9.40e-10!3;UBERON:0004695!9.40e-10!3;UBERON:0002111!9.40e-10!3;UBERON:0004178!9.40e-10!3;UBERON:0000358!1.19e-08!3;UBERON:0000307!1.19e-08!3;UBERON:0000947!2.19e-07!4;UBERON:0001637!2.19e-07!4;UBERON:0003509!2.19e-07!4;UBERON:0004573!2.19e-07!4;UBERON:0004571!2.19e-07!4;UBERON:0010191!2.19e-07!4;UBERON:0004572!2.19e-07!4;UBERON:0002410!5.15e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,3.67e-34,3;UBERON:0004237,3.67e-34,3;UBERON:0004695,3.67e-34,3;UBERON:0002111,3.67e-34,3;UBERON:0004178,3.67e-34,3;UBERON:0000947,7.67e-26,4;UBERON:0001637,7.67e-26,4;UBERON:0004573,7.67e-26,4;UBERON:0003509,7.67e-26,4;UBERON:0004571,7.67e-26,4;UBERON:0010191,7.67e-26,4;UBERON:0004572,7.67e-26,4;UBERON:0000055,7.72e-21,5;UBERON:0007500,7.72e-21,5;UBERON:0001981,7.72e-21,5;UBERON:0002049,7.72e-21,5;UBERON:0007798,7.72e-21,5;UBERON:0004537,7.72e-21,5;UBERON:0006965,7.72e-21,5;UBERON:0002204,1.71e-12,32;UBERON:0001134,6.65e-12,9;UBERON:0002036,6.65e-12,9;UBERON:0002385,6.65e-12,9;UBERON:0000486,6.65e-12,9;UBERON:0007503,6.65e-12,9;UBERON:0001015,6.65e-12,9;UBERON:0002329,6.65e-12,9;UBERON:0003082,6.65e-12,9;UBERON:0003059,6.65e-12,9;UBERON:0007282,6.65e-12,9;UBERON:0004290,6.65e-12,9;UBERON:0009618,6.65e-12,9;UBERON:0000383,8.83e-11,10;UBERON:0007524,7.37e-10,11;UBERON:0003077,7.37e-10,11;UBERON:0007285,7.37e-10,11;UBERON:0002371,9.62e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.54663453473002,5.5757312170733,4.77221555620372,1.56478268869608,0,0,0.388859798148567,0.139986421625363,1.43752564364972,0,0,0,0,0,0,0,0,0,0.338844532069132,0.889294796111139,1.7997994345628,2.96659908770092,1.4209602298922,0.898800331555214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0.519572009205738,0,0,0,0,0,0,0.506719730950197,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.631016438832513,0,0.215423397732799,0,0.445597348164788,0.283076530788832,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0.299033092087958,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443971906748129,0.538283139656854,0.335769232728157,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:88920480..88920487,- | |||
}} |
Latest revision as of 19:36, 5 August 2015
Short description: | p@chr4:88920480..88920487, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:88920480..88920487, - |
Coexpression cluster: | MCL_coexpression_mm9:600 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.67e-34 | 3 |
vascular associated smooth muscle cell | 3.67e-34 | 3 |
aortic smooth muscle cell | 3.67e-34 | 3 |
smooth muscle myoblast | 3.67e-34 | 3 |
bone marrow cell | 5.97e-33 | 3 |
mesenchymal stem cell of the bone marrow | 5.97e-33 | 3 |
muscle precursor cell | 1.70e-17 | 6 |
muscle cell | 1.70e-17 | 6 |
myoblast | 1.70e-17 | 6 |
mesodermal cell | 4.19e-15 | 7 |
multi-potent skeletal muscle stem cell | 6.65e-12 | 9 |
oligodendrocyte | 4.03e-08 | 6 |
macroglial cell | 4.03e-08 | 6 |
astrocyte | 4.03e-08 | 6 |