FFCP PHASE1:Mm9::chr9:92170589..92170605,+: Difference between revisions
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{{FFCP|EntrezGene=18828|HGNC=|MCL_coexpression_id=11|UniProt=D3Z2S8|association_with_transcript=5bp_to_ENSMUST00000126911_5end|description=CAGE_peak_5_at_Plscr2_5end|id=chr9:92170589..92170605,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000222,5.77e-12,7;CL:0000680,1.96e-10,6;CL:0000187,1.96e-10,6;CL:0000056,1.96e-10,6;CL:0000182,3.14e-08,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003103!1.13e-13!43;UBERON:0009569!5.66e-13!66;UBERON:0002100!1.02e-12!98;UBERON:0003914!6.74e-12!47;UBERON:0004535!1.95e-11!23;UBERON:0001009!1.95e-11!23;UBERON:0005177!3.74e-11!85;UBERON:0004872!2.70e-10!33;UBERON:0000466!3.37e-10!79;UBERON:0000926!1.67e-09!193;UBERON:0004120!1.67e-09!193;UBERON:0006603!1.67e-09!193;UBERON:0005172!2.03e-09!49;UBERON:0005173!2.03e-09!49;UBERON:0002417!2.03e-09!49;UBERON:0000916!2.03e-09!49;UBERON:0002113!5.05e-09!14;UBERON:0003918!5.05e-09!14;UBERON:0005095!5.05e-09!14;UBERON:0007687!5.05e-09!14;UBERON:0006554!8.68e-09!16;UBERON:0000464!1.33e-08!57;UBERON:0007100!2.19e-08!18;UBERON:0000948!2.19e-08!18;UBERON:0005498!2.19e-08!18;UBERON:0004140!2.19e-08!18;UBERON:0009881!2.19e-08!18;UBERON:0004141!2.19e-08!18;UBERON:0003084!2.19e-08!18;UBERON:0007005!2.19e-08!18;UBERON:0004139!2.19e-08!18;UBERON:0004291!2.19e-08!18;UBERON:0001008!7.37e-08!17;UBERON:0004111!7.79e-07!122;UBERON:0001048!9.36e-07!147|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.30e-18,47;UBERON:0003103,1.11e-17,43;UBERON:0003104,8.85e-15,61;UBERON:0009142,8.85e-15,61;UBERON:0004535,9.09e-15,23;UBERON:0001009,9.09e-15,23;UBERON:0002100,1.45e-14,90;UBERON:0002113,6.54e-13,14;UBERON:0003918,6.54e-13,14;UBERON:0011143,6.54e-13,14;UBERON:0005095,6.54e-13,14;UBERON:0007687,6.54e-13,14;UBERON:0009569,6.81e-13,66;UBERON:0005172,5.30e-11,49;UBERON:0005173,5.30e-11,49;UBERON:0002417,5.30e-11,49;UBERON:0000916,5.30e-11,49;UBERON:0005177,1.36e-10,79;UBERON:0007100,2.90e-10,18;UBERON:0000948,2.90e-10,18;UBERON:0005498,2.90e-10,18;UBERON:0004140,2.90e-10,18;UBERON:0009881,2.90e-10,18;UBERON:0004141,2.90e-10,18;UBERON:0003084,2.90e-10,18;UBERON:0007005,2.90e-10,18;UBERON:0004139,2.90e-10,18;UBERON:0004291,2.90e-10,18;UBERON:0004872,3.08e-10,33;UBERON:0005256,1.05e-09,45;UBERON:0006554,1.96e-09,18;UBERON:0004111,3.93e-09,122;UBERON:0000025,7.06e-09,114;UBERON:0001008,8.49e-09,19;UBERON:0000489,1.04e-07,21|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14660173558958,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.79125362687656,5.27160042341476,2.75320128242522,0,1.09012578190223,3.07560655828261,2.52758868796568,0.839918529752175,0,0,0,0,3.08711323243136,1.71920063963254,5.67239301505187,0,0,0,1.0165335962074,1.77858959222228,0,0,0,0.299600110518405,1.53687322128622,0,0,0.210324961351382,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0.837548997004143,0.56276261003168,0.30559649555362,0,0.142371680799103,0,0.227178579999552,0.604572480854284,3.76823835312181,3.44169550792555,1.3599426674155,2.15881276655127,1.94932925234301,4.48026887097336,0.842666520790511,0.170430322578058,0,0,0,0,0,0,1.94841936910093,1.52015919285059,0.505524445014783,2.62622923353838,0,1.63286352971307,0.173485326766136,0,0.230615497256059,0.60289056221049,0.705532242814229,0.502666365318702,0,0.578397427679647,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0.449371918214468,0,0,0.173824320192276,0,0.62336413367868,0,1.32391173005411,0.995255764880744,2.0217820674694,0.210441855886474,0,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0.796137067273973,0,0,0,0.621377317606506,0,0.540186184383045,0.23674473558521,0.393528463494808,0.462801338662135,1.16266972375204,1.3413670069981,1.28441876603886,1.31647879930784,1.80584210487005,2.75633952455909,3.07019973593198,3.95190207523891,7.38135303182045,0.210289948564127,0,0,0,0.639864751605702,0.232236671860439,0,0,0,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0.189667900953082,0.456994050438915,1.1270773567308,2.44381593414377,3.29719228184964,3.64706263429657,8.78987866027176,23.7652338247159,22.4508180813166,24.9262271122037,5.63259991465583,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,1.43768206527355,0,0,0.505157755894224,1.97337154874103,1.92977408545347,4.98833613449833,0.189491411770485,0,0.169745085775188,0.234690248288502,0.837531287209079,0,0.975668239288994,0.472905432318573,0.44292937929755,0,3.60499292374624,3.28101465545202,3.90552458170081,0,0,0,1.93155722413313,0.80275294993896,0.35163505977661,0.163934945376675,0,0.315508219416257,0,0.430846795465598,1.43381278771531,0.445597348164788,0.283076530788832,1.21443210502468,0.292255857911312,0.395287777946524,0.321321316421807,0.851640511249612,0.178065603667255,0.651547837414304,1.64970122972535,3.98235415019888,0.242780636154981,0,0.188605079755898,0.295301892880773,0.307435147943927,0,0,0.712994756769443,0.316036757935816,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0.220528398054962,0,0.161464426695906,0,0,0.164140899745061,0,0.927126510052548,0.683483523191411,0.412773735926445,0,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,0.954670618015114,0.158167996790568,0,0.216010681643603,0.418176592028937,0,0,0.0826534557253359,0,0,1.24267862617385,1.12738587736838,0.747582730219894,0.165458490457098,0.388902376688095,0.516639293910924,0.337912250981556,0.117357238645754,0.651021924219751,0.524296722128554,0.241584120826006,0.288030006257865,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0.93841237725591,0.183151624267265,0,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0,0,0,0.320919209591815,0,0.25347929989024,0.377252682772152,0.280924522409647,0.0640251524048693,0,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.169229215783353,0,0,0,0,0.118635018124174,0.29551344712669,0,0.154936841185966,0.192906610981141,0,0,0,0,0.220591419119515,0.231867835620421|short_description=p5@Plscr2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18828 | |||
|HGNC= | |||
|MCL_coexpression_id=11 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3Z2S8 | |||
|association_with_transcript=5bp_to_ENSMUST00000126911_5end | |||
|cluster_id=chr9:92170589..92170605,+ | |||
|description=CAGE_peak_5_at_Plscr2_5end | |||
|id=chr9:92170589..92170605,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.77e-12,7;CL:0000680,1.96e-10,6;CL:0000187,1.96e-10,6;CL:0000056,1.96e-10,6;CL:0000182,3.14e-08,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003103!1.13e-13!43;UBERON:0009569!5.66e-13!66;UBERON:0002100!1.02e-12!98;UBERON:0003914!6.74e-12!47;UBERON:0004535!1.95e-11!23;UBERON:0001009!1.95e-11!23;UBERON:0005177!3.74e-11!85;UBERON:0004872!2.70e-10!33;UBERON:0000466!3.37e-10!79;UBERON:0000926!1.67e-09!193;UBERON:0004120!1.67e-09!193;UBERON:0006603!1.67e-09!193;UBERON:0005172!2.03e-09!49;UBERON:0005173!2.03e-09!49;UBERON:0002417!2.03e-09!49;UBERON:0000916!2.03e-09!49;UBERON:0002113!5.05e-09!14;UBERON:0003918!5.05e-09!14;UBERON:0005095!5.05e-09!14;UBERON:0007687!5.05e-09!14;UBERON:0006554!8.68e-09!16;UBERON:0000464!1.33e-08!57;UBERON:0007100!2.19e-08!18;UBERON:0000948!2.19e-08!18;UBERON:0005498!2.19e-08!18;UBERON:0004140!2.19e-08!18;UBERON:0009881!2.19e-08!18;UBERON:0004141!2.19e-08!18;UBERON:0003084!2.19e-08!18;UBERON:0007005!2.19e-08!18;UBERON:0004139!2.19e-08!18;UBERON:0004291!2.19e-08!18;UBERON:0001008!7.37e-08!17;UBERON:0004111!7.79e-07!122;UBERON:0001048!9.36e-07!147 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.30e-18,47;UBERON:0003103,1.11e-17,43;UBERON:0003104,8.85e-15,61;UBERON:0009142,8.85e-15,61;UBERON:0004535,9.09e-15,23;UBERON:0001009,9.09e-15,23;UBERON:0002100,1.45e-14,90;UBERON:0002113,6.54e-13,14;UBERON:0003918,6.54e-13,14;UBERON:0011143,6.54e-13,14;UBERON:0005095,6.54e-13,14;UBERON:0007687,6.54e-13,14;UBERON:0009569,6.81e-13,66;UBERON:0005172,5.30e-11,49;UBERON:0005173,5.30e-11,49;UBERON:0002417,5.30e-11,49;UBERON:0000916,5.30e-11,49;UBERON:0005177,1.36e-10,79;UBERON:0007100,2.90e-10,18;UBERON:0000948,2.90e-10,18;UBERON:0005498,2.90e-10,18;UBERON:0004140,2.90e-10,18;UBERON:0009881,2.90e-10,18;UBERON:0004141,2.90e-10,18;UBERON:0003084,2.90e-10,18;UBERON:0007005,2.90e-10,18;UBERON:0004139,2.90e-10,18;UBERON:0004291,2.90e-10,18;UBERON:0004872,3.08e-10,33;UBERON:0005256,1.05e-09,45;UBERON:0006554,1.96e-09,18;UBERON:0004111,3.93e-09,122;UBERON:0000025,7.06e-09,114;UBERON:0001008,8.49e-09,19;UBERON:0000489,1.04e-07,21 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14660173558958,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.79125362687656,5.27160042341476,2.75320128242522,0,1.09012578190223,3.07560655828261,2.52758868796568,0.839918529752175,0,0,0,0,3.08711323243136,1.71920063963254,5.67239301505187,0,0,0,1.0165335962074,1.77858959222228,0,0,0,0.299600110518405,1.53687322128622,0,0,0.210324961351382,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0.837548997004143,0.56276261003168,0.30559649555362,0,0.142371680799103,0,0.227178579999552,0.604572480854284,3.76823835312181,3.44169550792555,1.3599426674155,2.15881276655127,1.94932925234301,4.48026887097336,0.842666520790511,0.170430322578058,0,0,0,0,0,0,1.94841936910093,1.52015919285059,0.505524445014783,2.62622923353838,0,1.63286352971307,0.173485326766136,0,0.230615497256059,0.60289056221049,0.705532242814229,0.502666365318702,0,0.578397427679647,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0.449371918214468,0,0,0.173824320192276,0,0.62336413367868,0,1.32391173005411,0.995255764880744,2.0217820674694,0.210441855886474,0,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0.796137067273973,0,0,0,0.621377317606506,0,0.540186184383045,0.23674473558521,0.393528463494808,0.462801338662135,1.16266972375204,1.3413670069981,1.28441876603886,1.31647879930784,1.80584210487005,2.75633952455909,3.07019973593198,3.95190207523891,7.38135303182045,0.210289948564127,0,0,0,0.639864751605702,0.232236671860439,0,0,0,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0.189667900953082,0.456994050438915,1.1270773567308,2.44381593414377,3.29719228184964,3.64706263429657,8.78987866027176,23.7652338247159,22.4508180813166,24.9262271122037,5.63259991465583,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,1.43768206527355,0,0,0.505157755894224,1.97337154874103,1.92977408545347,4.98833613449833,0.189491411770485,0,0.169745085775188,0.234690248288502,0.837531287209079,0,0.975668239288994,0.472905432318573,0.44292937929755,0,3.60499292374624,3.28101465545202,3.90552458170081,0,0,0,1.93155722413313,0.80275294993896,0.35163505977661,0.163934945376675,0,0.315508219416257,0,0.430846795465598,1.43381278771531,0.445597348164788,0.283076530788832,1.21443210502468,0.292255857911312,0.395287777946524,0.321321316421807,0.851640511249612,0.178065603667255,0.651547837414304,1.64970122972535,3.98235415019888,0.242780636154981,0,0.188605079755898,0.295301892880773,0.307435147943927,0,0,0.712994756769443,0.316036757935816,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0.220528398054962,0,0.161464426695906,0,0,0.164140899745061,0,0.927126510052548,0.683483523191411,0.412773735926445,0,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,0.954670618015114,0.158167996790568,0,0.216010681643603,0.418176592028937,0,0,0.0826534557253359,0,0,1.24267862617385,1.12738587736838,0.747582730219894,0.165458490457098,0.388902376688095,0.516639293910924,0.337912250981556,0.117357238645754,0.651021924219751,0.524296722128554,0.241584120826006,0.288030006257865,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0.93841237725591,0.183151624267265,0,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0,0,0,0.320919209591815,0,0.25347929989024,0.377252682772152,0.280924522409647,0.0640251524048693,0,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.169229215783353,0,0,0,0,0.118635018124174,0.29551344712669,0,0.154936841185966,0.192906610981141,0,0,0,0,0.220591419119515,0.231867835620421 | |||
|short_description=p5@Plscr2 | |||
}} |
Revision as of 18:52, 5 August 2015
Short description: | p5@Plscr2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Plscr2_5end |
Coexpression cluster: | MCL_coexpression_mm9:11 |
Association with transcript: | 5bp_to_ENSMUST00000126911_5end |
EntrezGene: | 18828 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.77e-12 | 7 |
muscle precursor cell | 1.96e-10 | 6 |
muscle cell | 1.96e-10 | 6 |
myoblast | 1.96e-10 | 6 |
hepatocyte | 3.14e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 1.30e-18 | 47 |
compound organ | 1.11e-17 | 43 |
mesenchyme | 8.85e-15 | 61 |
entire embryonic mesenchyme | 8.85e-15 | 61 |
cardiovascular system | 9.09e-15 | 23 |
circulatory system | 9.09e-15 | 23 |
trunk | 1.45e-14 | 90 |
kidney | 6.54e-13 | 14 |
kidney mesenchyme | 6.54e-13 | 14 |
upper urinary tract | 6.54e-13 | 14 |
kidney rudiment | 6.54e-13 | 14 |
kidney field | 6.54e-13 | 14 |
subdivision of trunk | 6.81e-13 | 66 |
abdomen element | 5.30e-11 | 49 |
abdominal segment element | 5.30e-11 | 49 |
abdominal segment of trunk | 5.30e-11 | 49 |
abdomen | 5.30e-11 | 49 |
trunk region element | 1.36e-10 | 79 |
primary circulatory organ | 2.90e-10 | 18 |
heart | 2.90e-10 | 18 |
primitive heart tube | 2.90e-10 | 18 |
primary heart field | 2.90e-10 | 18 |
anterior lateral plate mesoderm | 2.90e-10 | 18 |
heart tube | 2.90e-10 | 18 |
heart primordium | 2.90e-10 | 18 |
cardiac mesoderm | 2.90e-10 | 18 |
cardiogenic plate | 2.90e-10 | 18 |
heart rudiment | 2.90e-10 | 18 |
splanchnic layer of lateral plate mesoderm | 3.08e-10 | 33 |
trunk mesenchyme | 1.05e-09 | 45 |
urinary system structure | 1.96e-09 | 18 |
anatomical conduit | 3.93e-09 | 122 |
tube | 7.06e-09 | 114 |
renal system | 8.49e-09 | 19 |
cavitated compound organ | 1.04e-07 | 21 |