FFCP PHASE1:Mm9::chr18:38115302..38115326,+: Difference between revisions
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{{FFCP|EntrezGene=225392|HGNC=|MCL_coexpression_id=20|UniProt=Q8CFT0|association_with_transcript=24bp_to_ENSMUST00000091932_5end|description=CAGE_peak_3_at_Rell2_5end|id=chr18:38115302..38115326,+|ontology_enrichment_celltype=CL:0000117!2.22e-16!23;CL:0000337!2.22e-16!23;CL:0000540!2.25e-10!33;CL:0000047!2.25e-10!33;CL:0000031!2.25e-10!33;CL:0000404!2.25e-10!33;CL:0000221!2.94e-08!44;CL:0000133!2.94e-08!44;CL:0002319!9.17e-08!43;CL:0000393!1.00e-07!39;CL:0000211!1.00e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,3.71e-15,23;CL:0000337,3.71e-15,23;CL:0000540,1.07e-09,33;CL:0000047,1.07e-09,33;CL:0000031,1.07e-09,33;CL:0000404,1.07e-09,33;CL:0002610,7.63e-09,3;CL:0002614,3.97e-08,3;CL:0000393,8.88e-08,39;CL:0000211,8.88e-08,39;CL:0002612,2.23e-07,3;CL:0002319,8.38e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.51e-25!52;UBERON:0005068!1.51e-25!52;UBERON:0006241!1.51e-25!52;UBERON:0007135!1.51e-25!52;UBERON:0000073!2.82e-25!75;UBERON:0001016!2.82e-25!75;UBERON:0001017!3.10e-24!73;UBERON:0005743!3.10e-24!73;UBERON:0000955!8.07e-24!50;UBERON:0006238!8.07e-24!50;UBERON:0002616!7.10e-23!49;UBERON:0002020!8.13e-23!34;UBERON:0000033!2.07e-20!63;UBERON:0002791!5.35e-18!29;UBERON:0003528!5.35e-18!29;UBERON:0001893!5.35e-18!29;UBERON:0003080!2.87e-17!40;UBERON:0002346!1.15e-16!71;UBERON:0003075!1.15e-16!71;UBERON:0007284!1.15e-16!71;UBERON:0004121!1.81e-16!102;UBERON:0000924!1.81e-16!102;UBERON:0006601!1.81e-16!102;UBERON:0002780!2.43e-16!39;UBERON:0001890!2.43e-16!39;UBERON:0006240!2.43e-16!39;UBERON:0003056!4.61e-14!49;UBERON:0007811!3.33e-13!86;UBERON:0000956!4.24e-13!21;UBERON:0001869!4.24e-13!21;UBERON:0000203!4.24e-13!21;UBERON:0002619!1.18e-11!17;UBERON:0000153!1.47e-11!94;UBERON:0002021!5.10e-11!10;UBERON:0000411!5.10e-11!10;UBERON:0001950!5.10e-11!10;UBERON:0003076!5.13e-09!12;UBERON:0003057!5.13e-09!12;UBERON:0002298!8.11e-08!6;UBERON:0002240!2.35e-07!6;UBERON:0005174!2.35e-07!6;UBERON:0001137!2.35e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.98e-40,54;UBERON:0001049,3.07e-36,52;UBERON:0005068,3.07e-36,52;UBERON:0006241,3.07e-36,52;UBERON:0007135,3.07e-36,52;UBERON:0001017,9.76e-35,73;UBERON:0001016,1.27e-33,75;UBERON:0002020,5.06e-29,34;UBERON:0002346,3.35e-28,64;UBERON:0003075,3.35e-28,64;UBERON:0007284,3.35e-28,64;UBERON:0000955,5.78e-27,47;UBERON:0006238,5.78e-27,47;UBERON:0002616,2.81e-25,46;UBERON:0004121,4.80e-25,95;UBERON:0000924,4.80e-25,95;UBERON:0006601,4.80e-25,95;UBERON:0010371,6.63e-24,73;UBERON:0002021,2.76e-22,10;UBERON:0000411,2.76e-22,10;UBERON:0001950,2.76e-22,10;UBERON:0003528,5.61e-20,29;UBERON:0002791,5.61e-20,29;UBERON:0001893,5.61e-20,29;UBERON:0003080,1.33e-19,40;UBERON:0003076,4.30e-19,12;UBERON:0003057,4.30e-19,12;UBERON:0002780,5.57e-18,39;UBERON:0001890,5.57e-18,39;UBERON:0006240,5.57e-18,39;UBERON:0010314,1.37e-17,92;UBERON:0002619,1.56e-17,17;UBERON:0000956,2.72e-16,21;UBERON:0001869,2.72e-16,21;UBERON:0000203,2.72e-16,21;UBERON:0003056,3.90e-15,49;UBERON:0002240,2.92e-14,6;UBERON:0005174,2.92e-14,6;UBERON:0001137,2.92e-14,6;UBERON:0000025,6.62e-13,114;UBERON:0001948,9.70e-12,5;UBERON:0002315,9.70e-12,5;UBERON:0004111,1.28e-11,122;UBERON:0002950,2.67e-10,4;UBERON:0001891,2.67e-10,4;UBERON:0009616,2.67e-10,4;UBERON:0010286,2.67e-10,4;UBERON:0004684,7.63e-09,3;UBERON:0002275,7.63e-09,3;UBERON:0011216,1.59e-08,194;UBERON:0002038,3.97e-08,3;UBERON:0009663,3.97e-08,3;UBERON:0009661,3.97e-08,3;UBERON:0000125,3.97e-08,3;UBERON:0002308,3.97e-08,3;UBERON:0002257,2.23e-07,3;UBERON:0004733,4.67e-07,6;UBERON:0004732,4.67e-07,6;UBERON:0002028,4.67e-07,6;UBERON:0007277,4.67e-07,6|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.129123323441576,0,0,0.171217968225505,0.0797721589953364,0,0,0,0,0,0,0,0,1.02051948181284,0.0992909512008853,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,0.414758449233911,0.540023753326763,0,7.42692559449889,4.63823935998388,0.122490799214954,0.0958454710182364,1.83843757322004,8.8092704799511,9.57655035638908,10.4452442614246,0.263772575460388,0.274462930807229,0,13.959149950069,3.93933827022176,4.73674568108111,5.30331453852602,3.70166370077668,1.86399445825301,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0.220841518460394,0,0,3.22058876712702,6.28340120440365,0,0,0,0.127070227073065,6.14141621559773,4.11750542536764,0.376963056338593,5.38855392596057,4.60287823194595,9.55825004973976,5.67844420737152,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15434922846191,0.823236899034275,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.5000143086693,13.0104972117346,0,0,0,0,0,0,0,0,0,0,0,4.4984984299053,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0.304464949114599,0.23467170806371,0,0,0,0,0,0,0,0,20.2113579191456,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0.314578033277133,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,6.7770221114048,6.44455331110048,3.43737308063638,7.90524638780963,6.85082519770642,3.7769694869485,2.70009000092722,2.70192721934532,3.62513927187364,7.24864436452548,0,0,0.170733605754134,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0,0.0640251524048693,0.114870937911227,0.952587382566147,0,0.192909220463705,0,0,1.02860775715625,0.177475806159338,0,0.290692833264657,0,0.169229215783353,0.365855945745545,0,0,0,0,0.0985044823755635,0,0,0,0.749431733813838,0,0.429742108096597,0.191288332068843,0.661774257358546,0.231867835620421|short_description=p3@Rell2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:225392 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8CFT0 | |||
|association_with_transcript=24bp_to_ENSMUST00000091932_5end | |||
|cluster_id=chr18:38115302..38115326,+ | |||
|description=CAGE_peak_3_at_Rell2_5end | |||
|id=chr18:38115302..38115326,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.22e-16!23;CL:0000337!2.22e-16!23;CL:0000540!2.25e-10!33;CL:0000047!2.25e-10!33;CL:0000031!2.25e-10!33;CL:0000404!2.25e-10!33;CL:0000221!2.94e-08!44;CL:0000133!2.94e-08!44;CL:0002319!9.17e-08!43;CL:0000393!1.00e-07!39;CL:0000211!1.00e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.71e-15,23;CL:0000337,3.71e-15,23;CL:0000540,1.07e-09,33;CL:0000047,1.07e-09,33;CL:0000031,1.07e-09,33;CL:0000404,1.07e-09,33;CL:0002610,7.63e-09,3;CL:0002614,3.97e-08,3;CL:0000393,8.88e-08,39;CL:0000211,8.88e-08,39;CL:0002612,2.23e-07,3;CL:0002319,8.38e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.51e-25!52;UBERON:0005068!1.51e-25!52;UBERON:0006241!1.51e-25!52;UBERON:0007135!1.51e-25!52;UBERON:0000073!2.82e-25!75;UBERON:0001016!2.82e-25!75;UBERON:0001017!3.10e-24!73;UBERON:0005743!3.10e-24!73;UBERON:0000955!8.07e-24!50;UBERON:0006238!8.07e-24!50;UBERON:0002616!7.10e-23!49;UBERON:0002020!8.13e-23!34;UBERON:0000033!2.07e-20!63;UBERON:0002791!5.35e-18!29;UBERON:0003528!5.35e-18!29;UBERON:0001893!5.35e-18!29;UBERON:0003080!2.87e-17!40;UBERON:0002346!1.15e-16!71;UBERON:0003075!1.15e-16!71;UBERON:0007284!1.15e-16!71;UBERON:0004121!1.81e-16!102;UBERON:0000924!1.81e-16!102;UBERON:0006601!1.81e-16!102;UBERON:0002780!2.43e-16!39;UBERON:0001890!2.43e-16!39;UBERON:0006240!2.43e-16!39;UBERON:0003056!4.61e-14!49;UBERON:0007811!3.33e-13!86;UBERON:0000956!4.24e-13!21;UBERON:0001869!4.24e-13!21;UBERON:0000203!4.24e-13!21;UBERON:0002619!1.18e-11!17;UBERON:0000153!1.47e-11!94;UBERON:0002021!5.10e-11!10;UBERON:0000411!5.10e-11!10;UBERON:0001950!5.10e-11!10;UBERON:0003076!5.13e-09!12;UBERON:0003057!5.13e-09!12;UBERON:0002298!8.11e-08!6;UBERON:0002240!2.35e-07!6;UBERON:0005174!2.35e-07!6;UBERON:0001137!2.35e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.98e-40,54;UBERON:0001049,3.07e-36,52;UBERON:0005068,3.07e-36,52;UBERON:0006241,3.07e-36,52;UBERON:0007135,3.07e-36,52;UBERON:0001017,9.76e-35,73;UBERON:0001016,1.27e-33,75;UBERON:0002020,5.06e-29,34;UBERON:0002346,3.35e-28,64;UBERON:0003075,3.35e-28,64;UBERON:0007284,3.35e-28,64;UBERON:0000955,5.78e-27,47;UBERON:0006238,5.78e-27,47;UBERON:0002616,2.81e-25,46;UBERON:0004121,4.80e-25,95;UBERON:0000924,4.80e-25,95;UBERON:0006601,4.80e-25,95;UBERON:0010371,6.63e-24,73;UBERON:0002021,2.76e-22,10;UBERON:0000411,2.76e-22,10;UBERON:0001950,2.76e-22,10;UBERON:0003528,5.61e-20,29;UBERON:0002791,5.61e-20,29;UBERON:0001893,5.61e-20,29;UBERON:0003080,1.33e-19,40;UBERON:0003076,4.30e-19,12;UBERON:0003057,4.30e-19,12;UBERON:0002780,5.57e-18,39;UBERON:0001890,5.57e-18,39;UBERON:0006240,5.57e-18,39;UBERON:0010314,1.37e-17,92;UBERON:0002619,1.56e-17,17;UBERON:0000956,2.72e-16,21;UBERON:0001869,2.72e-16,21;UBERON:0000203,2.72e-16,21;UBERON:0003056,3.90e-15,49;UBERON:0002240,2.92e-14,6;UBERON:0005174,2.92e-14,6;UBERON:0001137,2.92e-14,6;UBERON:0000025,6.62e-13,114;UBERON:0001948,9.70e-12,5;UBERON:0002315,9.70e-12,5;UBERON:0004111,1.28e-11,122;UBERON:0002950,2.67e-10,4;UBERON:0001891,2.67e-10,4;UBERON:0009616,2.67e-10,4;UBERON:0010286,2.67e-10,4;UBERON:0004684,7.63e-09,3;UBERON:0002275,7.63e-09,3;UBERON:0011216,1.59e-08,194;UBERON:0002038,3.97e-08,3;UBERON:0009663,3.97e-08,3;UBERON:0009661,3.97e-08,3;UBERON:0000125,3.97e-08,3;UBERON:0002308,3.97e-08,3;UBERON:0002257,2.23e-07,3;UBERON:0004733,4.67e-07,6;UBERON:0004732,4.67e-07,6;UBERON:0002028,4.67e-07,6;UBERON:0007277,4.67e-07,6 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.129123323441576,0,0,0.171217968225505,0.0797721589953364,0,0,0,0,0,0,0,0,1.02051948181284,0.0992909512008853,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,0.414758449233911,0.540023753326763,0,7.42692559449889,4.63823935998388,0.122490799214954,0.0958454710182364,1.83843757322004,8.8092704799511,9.57655035638908,10.4452442614246,0.263772575460388,0.274462930807229,0,13.959149950069,3.93933827022176,4.73674568108111,5.30331453852602,3.70166370077668,1.86399445825301,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0.220841518460394,0,0,3.22058876712702,6.28340120440365,0,0,0,0.127070227073065,6.14141621559773,4.11750542536764,0.376963056338593,5.38855392596057,4.60287823194595,9.55825004973976,5.67844420737152,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15434922846191,0.823236899034275,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.5000143086693,13.0104972117346,0,0,0,0,0,0,0,0,0,0,0,4.4984984299053,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0.304464949114599,0.23467170806371,0,0,0,0,0,0,0,0,20.2113579191456,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0.314578033277133,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,6.7770221114048,6.44455331110048,3.43737308063638,7.90524638780963,6.85082519770642,3.7769694869485,2.70009000092722,2.70192721934532,3.62513927187364,7.24864436452548,0,0,0.170733605754134,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0,0.0640251524048693,0.114870937911227,0.952587382566147,0,0.192909220463705,0,0,1.02860775715625,0.177475806159338,0,0.290692833264657,0,0.169229215783353,0.365855945745545,0,0,0,0,0.0985044823755635,0,0,0,0.749431733813838,0,0.429742108096597,0.191288332068843,0.661774257358546,0.231867835620421 | |||
|short_description=p3@Rell2 | |||
}} |
Revision as of 18:23, 5 August 2015
Short description: | p3@Rell2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rell2_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 24bp_to_ENSMUST00000091932_5end |
EntrezGene: | 225392 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.71e-15 | 23 |
neuroblast (sensu Vertebrata) | 3.71e-15 | 23 |
neuron | 1.07e-09 | 33 |
neuronal stem cell | 1.07e-09 | 33 |
neuroblast | 1.07e-09 | 33 |
electrically signaling cell | 1.07e-09 | 33 |
raphe nuclei neuron | 7.63e-09 | 3 |
neuron of the substantia nigra | 3.97e-08 | 3 |
electrically responsive cell | 8.88e-08 | 39 |
electrically active cell | 8.88e-08 | 39 |
neuron of the ventral spinal cord | 2.23e-07 | 3 |
neural cell | 8.38e-07 | 43 |