FFCP PHASE1:Mm9::chr11:16951979..16951999,+: Difference between revisions
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{{FFCP|EntrezGene=380686|HGNC=|MCL_coexpression_id=2|UniProt=Q5M8N0|association_with_transcript=42bp_to_NM_029861,uc007iby.1_5end|description=CAGE_peak_3_at_Cnrip1_5end|id=chr11:16951979..16951999,+|ontology_enrichment_celltype=CL:0000540!1.46e-16!33;CL:0000047!1.46e-16!33;CL:0000031!1.46e-16!33;CL:0000404!1.46e-16!33;CL:0000393!3.83e-16!39;CL:0000211!3.83e-16!39;CL:0000221!1.87e-15!44;CL:0000133!1.87e-15!44;CL:0002319!2.49e-15!43;CL:0000055!1.55e-14!50;CL:0000117!7.11e-14!23;CL:0000337!7.11e-14!23|ontology_enrichment_celltype_v019_2=CL:0000117,4.54e-22,23;CL:0000337,4.54e-22,23;CL:0000540,1.80e-21,33;CL:0000047,1.80e-21,33;CL:0000031,1.80e-21,33;CL:0000404,1.80e-21,33;CL:0000393,1.19e-16,39;CL:0000211,1.19e-16,39;CL:0002319,1.23e-16,43;CL:0000221,4.99e-16,44;CL:0000133,4.99e-16,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.23e-31!73;UBERON:0005743!1.23e-31!73;UBERON:0000073!3.36e-31!75;UBERON:0001016!3.36e-31!75;UBERON:0004121!5.91e-27!102;UBERON:0000924!5.91e-27!102;UBERON:0006601!5.91e-27!102;UBERON:0002346!3.83e-24!71;UBERON:0003075!3.83e-24!71;UBERON:0007284!3.83e-24!71;UBERON:0001049!8.82e-23!52;UBERON:0005068!8.82e-23!52;UBERON:0006241!8.82e-23!52;UBERON:0007135!8.82e-23!52;UBERON:0000033!3.03e-21!63;UBERON:0000955!3.46e-21!50;UBERON:0006238!3.46e-21!50;UBERON:0002616!1.51e-20!49;UBERON:0002020!2.40e-20!34;UBERON:0003056!2.94e-18!49;UBERON:0003080!1.50e-17!40;UBERON:0002780!5.47e-17!39;UBERON:0001890!5.47e-17!39;UBERON:0006240!5.47e-17!39;UBERON:0002791!7.20e-17!29;UBERON:0003528!7.20e-17!29;UBERON:0001893!7.20e-17!29;UBERON:0000956!2.71e-12!21;UBERON:0001869!2.71e-12!21;UBERON:0000203!2.71e-12!21;UBERON:0002619!1.88e-10!17;UBERON:0007811!6.24e-09!86;UBERON:0002021!1.62e-08!10;UBERON:0000411!1.62e-08!10;UBERON:0001950!1.62e-08!10;UBERON:0000153!2.44e-08!94|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.10e-40,73;UBERON:0001016,3.06e-38,75;UBERON:0000073,1.36e-33,54;UBERON:0002346,1.77e-33,64;UBERON:0003075,1.77e-33,64;UBERON:0007284,1.77e-33,64;UBERON:0004121,4.19e-33,95;UBERON:0000924,4.19e-33,95;UBERON:0006601,4.19e-33,95;UBERON:0001049,1.83e-31,52;UBERON:0005068,1.83e-31,52;UBERON:0006241,1.83e-31,52;UBERON:0007135,1.83e-31,52;UBERON:0002020,1.05e-30,34;UBERON:0010371,3.01e-27,73;UBERON:0000955,5.13e-26,47;UBERON:0006238,5.13e-26,47;UBERON:0002616,5.10e-25,46;UBERON:0003528,5.80e-25,29;UBERON:0002791,5.80e-25,29;UBERON:0001893,5.80e-25,29;UBERON:0003056,4.05e-24,49;UBERON:0003080,4.25e-23,40;UBERON:0002780,3.35e-22,39;UBERON:0001890,3.35e-22,39;UBERON:0006240,3.35e-22,39;UBERON:0010314,3.27e-18,92;UBERON:0000956,2.14e-17,21;UBERON:0001869,2.14e-17,21;UBERON:0000203,2.14e-17,21;UBERON:0002619,2.53e-14,17;UBERON:0002021,3.82e-13,10;UBERON:0000411,3.82e-13,10;UBERON:0001950,3.82e-13,10;UBERON:0002420,1.15e-08,8;UBERON:0007245,1.15e-08,8;UBERON:0010009,1.15e-08,8;UBERON:0010011,1.15e-08,8;UBERON:0000454,1.15e-08,8;UBERON:0003076,1.17e-08,12;UBERON:0003057,1.17e-08,12;UBERON:0002240,1.21e-07,6;UBERON:0005174,1.21e-07,6;UBERON:0001137,1.21e-07,6;UBERON:0000025,2.06e-07,114;UBERON:0001948,7.00e-07,5;UBERON:0002315,7.00e-07,5|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0,0,1.87095238332354,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.405507724878058,0.734187008646726,0,0.436050312760893,0.659058548203415,0.388859798148567,0.279972843250725,2.87505128729943,0,0,0,0.514518872071894,0.286533439938757,0.515672092277442,5.05791152148994,7.93486468908049,3.80298842103708,0.677689064138264,0,0.449949858640699,0,1.4209602298922,1.19840044207362,0.384218305321555,1.55534418462716,1.89008313664367,1.68259969081106,9.14083150092171,11.0434270475807,1.71487118900936,1.43768206527355,1.83843757322004,3.30347642998166,5.61824287574826,3.99376986466233,5.67111037239834,5.30628332893976,8.85552729946492,3.62937898701795,4.50210088025344,6.26472815884921,14.142172102736,10.2507610175354,5.96478226640962,0.37863096666592,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0,0,0.704217098883403,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0.148442139064825,0.173485326766136,0.913396434936424,0.461230994512117,0.60289056221049,0.823120949949934,0.125666591329675,0,0,0,0.323533699894818,0.220841518460394,0,1.86391761218122,3.80615036115011,3.56059401582874,0,0.11981512450592,0,0,3.44518470631092,2.74500361691176,1.7591609295801,9.73416193076748,13.2972037811772,3.1168206683934,4.86723789203273,1.12023300235348,0.497627882440372,0,0,0.390361328888111,0.229902104433473,1.26043490863744,1.20563854268572,1.49680298132921,1.0249097622788,1.40552586839593,1.55222022443409,0.215567992932842,0.189106080167819,0.351902248327898,0.43839146485515,0.278047249225598,0,0.205782136407943,0.995171334092466,0,0,0,0,0.234526059981096,0,0.23674473558521,0.196764231747404,0.308534225774757,0.232533944750408,0,0.233530684734339,0.329119699826961,0.164167464079095,0.243206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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:380686 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q5M8N0 | |||
|association_with_transcript=42bp_to_NM_029861,uc007iby.1_5end | |||
|cluster_id=chr11:16951979..16951999,+ | |||
|description=CAGE_peak_3_at_Cnrip1_5end | |||
|id=chr11:16951979..16951999,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.46e-16!33;CL:0000047!1.46e-16!33;CL:0000031!1.46e-16!33;CL:0000404!1.46e-16!33;CL:0000393!3.83e-16!39;CL:0000211!3.83e-16!39;CL:0000221!1.87e-15!44;CL:0000133!1.87e-15!44;CL:0002319!2.49e-15!43;CL:0000055!1.55e-14!50;CL:0000117!7.11e-14!23;CL:0000337!7.11e-14!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.54e-22,23;CL:0000337,4.54e-22,23;CL:0000540,1.80e-21,33;CL:0000047,1.80e-21,33;CL:0000031,1.80e-21,33;CL:0000404,1.80e-21,33;CL:0000393,1.19e-16,39;CL:0000211,1.19e-16,39;CL:0002319,1.23e-16,43;CL:0000221,4.99e-16,44;CL:0000133,4.99e-16,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.23e-31!73;UBERON:0005743!1.23e-31!73;UBERON:0000073!3.36e-31!75;UBERON:0001016!3.36e-31!75;UBERON:0004121!5.91e-27!102;UBERON:0000924!5.91e-27!102;UBERON:0006601!5.91e-27!102;UBERON:0002346!3.83e-24!71;UBERON:0003075!3.83e-24!71;UBERON:0007284!3.83e-24!71;UBERON:0001049!8.82e-23!52;UBERON:0005068!8.82e-23!52;UBERON:0006241!8.82e-23!52;UBERON:0007135!8.82e-23!52;UBERON:0000033!3.03e-21!63;UBERON:0000955!3.46e-21!50;UBERON:0006238!3.46e-21!50;UBERON:0002616!1.51e-20!49;UBERON:0002020!2.40e-20!34;UBERON:0003056!2.94e-18!49;UBERON:0003080!1.50e-17!40;UBERON:0002780!5.47e-17!39;UBERON:0001890!5.47e-17!39;UBERON:0006240!5.47e-17!39;UBERON:0002791!7.20e-17!29;UBERON:0003528!7.20e-17!29;UBERON:0001893!7.20e-17!29;UBERON:0000956!2.71e-12!21;UBERON:0001869!2.71e-12!21;UBERON:0000203!2.71e-12!21;UBERON:0002619!1.88e-10!17;UBERON:0007811!6.24e-09!86;UBERON:0002021!1.62e-08!10;UBERON:0000411!1.62e-08!10;UBERON:0001950!1.62e-08!10;UBERON:0000153!2.44e-08!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.10e-40,73;UBERON:0001016,3.06e-38,75;UBERON:0000073,1.36e-33,54;UBERON:0002346,1.77e-33,64;UBERON:0003075,1.77e-33,64;UBERON:0007284,1.77e-33,64;UBERON:0004121,4.19e-33,95;UBERON:0000924,4.19e-33,95;UBERON:0006601,4.19e-33,95;UBERON:0001049,1.83e-31,52;UBERON:0005068,1.83e-31,52;UBERON:0006241,1.83e-31,52;UBERON:0007135,1.83e-31,52;UBERON:0002020,1.05e-30,34;UBERON:0010371,3.01e-27,73;UBERON:0000955,5.13e-26,47;UBERON:0006238,5.13e-26,47;UBERON:0002616,5.10e-25,46;UBERON:0003528,5.80e-25,29;UBERON:0002791,5.80e-25,29;UBERON:0001893,5.80e-25,29;UBERON:0003056,4.05e-24,49;UBERON:0003080,4.25e-23,40;UBERON:0002780,3.35e-22,39;UBERON:0001890,3.35e-22,39;UBERON:0006240,3.35e-22,39;UBERON:0010314,3.27e-18,92;UBERON:0000956,2.14e-17,21;UBERON:0001869,2.14e-17,21;UBERON:0000203,2.14e-17,21;UBERON:0002619,2.53e-14,17;UBERON:0002021,3.82e-13,10;UBERON:0000411,3.82e-13,10;UBERON:0001950,3.82e-13,10;UBERON:0002420,1.15e-08,8;UBERON:0007245,1.15e-08,8;UBERON:0010009,1.15e-08,8;UBERON:0010011,1.15e-08,8;UBERON:0000454,1.15e-08,8;UBERON:0003076,1.17e-08,12;UBERON:0003057,1.17e-08,12;UBERON:0002240,1.21e-07,6;UBERON:0005174,1.21e-07,6;UBERON:0001137,1.21e-07,6;UBERON:0000025,2.06e-07,114;UBERON:0001948,7.00e-07,5;UBERON:0002315,7.00e-07,5 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0,0,1.87095238332354,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.405507724878058,0.734187008646726,0,0.436050312760893,0.659058548203415,0.388859798148567,0.279972843250725,2.87505128729943,0,0,0,0.514518872071894,0.286533439938757,0.515672092277442,5.05791152148994,7.93486468908049,3.80298842103708,0.677689064138264,0,0.449949858640699,0,1.4209602298922,1.19840044207362,0.384218305321555,1.55534418462716,1.89008313664367,1.68259969081106,9.14083150092171,11.0434270475807,1.71487118900936,1.43768206527355,1.83843757322004,3.30347642998166,5.61824287574826,3.99376986466233,5.67111037239834,5.30628332893976,8.85552729946492,3.62937898701795,4.50210088025344,6.26472815884921,14.142172102736,10.2507610175354,5.96478226640962,0.37863096666592,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0,0,0.704217098883403,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0.148442139064825,0.173485326766136,0.913396434936424,0.461230994512117,0.60289056221049,0.823120949949934,0.125666591329675,0,0,0,0.323533699894818,0.220841518460394,0,1.86391761218122,3.80615036115011,3.56059401582874,0,0.11981512450592,0,0,3.44518470631092,2.74500361691176,1.7591609295801,9.73416193076748,13.2972037811772,3.1168206683934,4.86723789203273,1.12023300235348,0.497627882440372,0,0,0.390361328888111,0.229902104433473,1.26043490863744,1.20563854268572,1.49680298132921,1.0249097622788,1.40552586839593,1.55222022443409,0.215567992932842,0.189106080167819,0.351902248327898,0.43839146485515,0.278047249225598,0,0.205782136407943,0.995171334092466,0,0,0,0,0.234526059981096,0,0.23674473558521,0.196764231747404,0.308534225774757,0.232533944750408,0,0.233530684734339,0.329119699826961,0.164167464079095,0.243206428637567,0,0,0,12.6173969138476,6.17427674275707,0,0,0.213288250535234,0,0.515469845288373,0.201683524623343,0.22237804384487,0.380451252225118,0,0.164698954724011,0,0.795825888164603,0,0,0,0,0.758671603812327,0.685491075658373,0,0.407302655690628,0.387904974335251,0.210407459670956,0.126473074248515,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0.568474235311454,0.162964976442026,0.509235257325564,0,0.167506257441816,0,0,0.472905432318573,0,0,0.163863314715738,0,0,1.50791283939272,0,0,0,3.21101179975584,3.04750385139728,0,0.757412781613119,1.57754109708128,0.780877488593277,2.15423397732799,0.716906393857656,2.00518806674155,1.13230612315533,2.02405350837447,0.876767573733936,1.18586333383957,5.46246237917072,0,0.712262414669021,1.14020871547503,0.989820737835213,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0.680879211507576,0.18006109403131,0.388076051348264,0,0.532020700926821,0.535106452806212,1.48094118541909,2.74018454203139,0.23467170806371,0,0.661585194164886,0.32977250588296,0.322928853391811,0.120625849856312,0.119372344003136,0,0.291480836629851,2.78137953015765,0,0,0.185194527369712,0,0.136694227721025,0,0.339956859987711,1.25956307091292,0.552799895217695,0,0.316335993581135,0.406638934253697,0.432021363287205,0.418176592028937,0,0.134864346384821,0.165306911450672,0,0,0,0.56369293868419,0,0,1.16670713006429,0.258319646955462,0.675824501963113,0.352071715937262,0.13020438484395,0.524296722128554,0,0,0,0.608175645870493,0.205421914329655,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0.579568782096571,0.563047426353546,2.01466786693992,0.643105137237198,1.00314420807073,29.3670958160875,34.0640675015311,34.9466263198032,27.1528028103026,7.53590771747707,15.8632718451837,14.8504950050997,10.8077088773813,15.8599843144472,14.497288729051,0.518936737920883,0.399024873401031,0.682934423016537,1.21553358534147,1.67690530102386,1.47074806760011,1.11123363900808,0.618105171716683,0.64183841918363,1.51618327058278,0.760437899670719,1.32038438970253,0.749132059759059,1.53660365771686,1.09127391015665,0,0.927074607558844,0.964546102318525,1.64834360321323,0.294397840268795,2.05721551431249,0.887379030796687,1.1921809497366,1.30811774969096,2.07040636913727,1.18460451048347,0.914639864363863,0,0.814824683075171,0,1.18635018124174,0.985044823755635,0.818462086339379,0.309873682371932,0.771626443924566,1.74867404556562,1.16965804222704,0.214871054048298,1.3390183244819,0.661774257358546,1.15933917810211 | |||
|short_description=p3@Cnrip1 | |||
}} |
Revision as of 16:35, 5 August 2015
Short description: | p3@Cnrip1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cnrip1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 42bp_to_NM_029861, uc007iby.1_5end |
EntrezGene: | 380686 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.54e-22 | 23 |
neuroblast (sensu Vertebrata) | 4.54e-22 | 23 |
neuron | 1.80e-21 | 33 |
neuronal stem cell | 1.80e-21 | 33 |
neuroblast | 1.80e-21 | 33 |
electrically signaling cell | 1.80e-21 | 33 |
electrically responsive cell | 1.19e-16 | 39 |
electrically active cell | 1.19e-16 | 39 |
neural cell | 1.23e-16 | 43 |
ectodermal cell | 4.99e-16 | 44 |
neurectodermal cell | 4.99e-16 | 44 |