FFCP PHASE1:Mm9::chr18:35020075..35020080,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=232|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:35020075..35020080,-|id=chr18:35020075..35020080,-|ontology_enrichment_celltype=CL:0000066!4.99e-21!25;CL:0002563!8.65e-21!9;CL:0002251!8.65e-21!9;CL:0000075!6.03e-16!7;CL:0000063!6.72e-15!66;CL:0000239!5.07e-14!6;CL:0000677!5.07e-14!6;CL:0000212!5.07e-14!6;CL:0000584!5.07e-14!6;CL:0000223!1.03e-12!20;CL:0002076!1.02e-11!15;CL:0000144!1.19e-08!121;CL:0000012!1.19e-08!121;CL:0002250!2.38e-08!3;CL:0002371!3.77e-08!118;CL:0000548!1.10e-07!115;CL:0000004!1.10e-07!115;CL:0000255!1.10e-07!115;CL:0000473!1.37e-07!3;CL:0000627!1.37e-07!3;CL:0000682!1.37e-07!3|ontology_enrichment_celltype_v019_2=CL:0002563,5.36e-24,9;CL:0002251,5.36e-24,9;CL:0002250,1.36e-18,3;CL:0000066,1.81e-18,25;CL:0000223,1.83e-18,20;CL:0002076,2.76e-14,15;CL:0000239,7.51e-10,6;CL:0000677,7.51e-10,6;CL:0000584,7.51e-10,6;CL:0000764,1.02e-08,3;CL:0000765,1.02e-08,3;CL:0000038,1.02e-08,3;CL:0000547,1.02e-08,3;CL:0000075,1.63e-08,7;CL:0000213,4.21e-07,1;CL:0002078,4.21e-07,1;CL:0000115,4.21e-07,1;CL:0002262,4.21e-07,1;CL:1000398,4.21e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:2531,1.02e-08,3;DOID:0060083,1.02e-08,3;DOID:1240,1.02e-08,3|ontology_enrichment_uberon=UBERON:0000485!1.75e-24!11;UBERON:0003350!8.65e-21!9;UBERON:0004808!8.65e-21!9;UBERON:0001277!8.65e-21!9;UBERON:0001242!8.25e-14!13;UBERON:0000060!8.25e-14!13;UBERON:0001262!8.25e-14!13;UBERON:0004786!8.25e-14!13;UBERON:0000490!7.38e-12!66;UBERON:0000344!1.02e-11!15;UBERON:0003929!1.81e-08!55;UBERON:0005911!8.48e-07!69|ontology_enrichment_uberon_v019_2=UBERON:0003350,5.36e-24,9;UBERON:0004808,5.36e-24,9;UBERON:0001277,5.36e-24,9;UBERON:0000485,1.37e-19,11;UBERON:0001242,1.57e-16,13;UBERON:0001262,1.57e-16,13;UBERON:0004786,1.57e-16,13;UBERON:0000344,2.76e-14,15;UBERON:0004923,8.61e-09,24;UBERON:0000490,8.76e-08,66;UBERON:0003929,8.94e-08,55;UBERON:0002394,4.21e-07,1;UBERON:0001281,4.21e-07,1;UBERON:0000353,4.21e-07,1;UBERON:0003497,4.21e-07,1;UBERON:0003909,4.21e-07,1;UBERON:0003928,4.21e-07,1;UBERON:0003835,4.21e-07,1;UBERON:0003513,4.21e-07,1;UBERON:0001280,4.21e-07,1;UBERON:0004647,4.21e-07,1;UBERON:0002294,4.21e-07,1;UBERON:0001173,4.21e-07,1;UBERON:0004912,4.21e-07,1;UBERON:0005171,4.21e-07,1;UBERON:0002367,7.23e-07,1;UBERON:0009846,7.23e-07,1;UBERON:0003353,7.23e-07,1;UBERON:0004902,7.23e-07,1;UBERON:0003820,7.23e-07,1;UBERON:0009847,7.23e-07,1|phase1_expression=0.320297694209588,2.44282785347553,0.454999239389536,0.30246421130683,4.00716583957078,2.35030980676646,0.700837921786577,0.129123323441576,0.703943610758334,0.70219357896598,0.34243593645101,0,0,0,0,0,0,0,0.137114433605739,0,0,0,0,0,0,0.57423196411502,1.7230479846363,0.430942465371778,0,0,0,1.27006134691926,1.84519436275371,0,1.73310971850765,1.32987716286794,5.71674197534634,0.418531630736908,0,0,2.94115744015507,1.36609096991689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,1.03134418455488,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,0,0,1.61910957491345,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556094498451196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,1.10264199027481,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0,0,0,0.559805809294632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr18:35020075..35020080,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=232 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr18:35020075..35020080,- | |||
|description=CAGE_peak_at_chr18:35020075..35020080,- | |||
|id=chr18:35020075..35020080,- | |||
|ontology_enrichment_celltype=CL:0000066!4.99e-21!25;CL:0002563!8.65e-21!9;CL:0002251!8.65e-21!9;CL:0000075!6.03e-16!7;CL:0000063!6.72e-15!66;CL:0000239!5.07e-14!6;CL:0000677!5.07e-14!6;CL:0000212!5.07e-14!6;CL:0000584!5.07e-14!6;CL:0000223!1.03e-12!20;CL:0002076!1.02e-11!15;CL:0000144!1.19e-08!121;CL:0000012!1.19e-08!121;CL:0002250!2.38e-08!3;CL:0002371!3.77e-08!118;CL:0000548!1.10e-07!115;CL:0000004!1.10e-07!115;CL:0000255!1.10e-07!115;CL:0000473!1.37e-07!3;CL:0000627!1.37e-07!3;CL:0000682!1.37e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.36e-24,9;CL:0002251,5.36e-24,9;CL:0002250,1.36e-18,3;CL:0000066,1.81e-18,25;CL:0000223,1.83e-18,20;CL:0002076,2.76e-14,15;CL:0000239,7.51e-10,6;CL:0000677,7.51e-10,6;CL:0000584,7.51e-10,6;CL:0000764,1.02e-08,3;CL:0000765,1.02e-08,3;CL:0000038,1.02e-08,3;CL:0000547,1.02e-08,3;CL:0000075,1.63e-08,7;CL:0000213,4.21e-07,1;CL:0002078,4.21e-07,1;CL:0000115,4.21e-07,1;CL:0002262,4.21e-07,1;CL:1000398,4.21e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.02e-08,3;DOID:0060083,1.02e-08,3;DOID:1240,1.02e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0000485!1.75e-24!11;UBERON:0003350!8.65e-21!9;UBERON:0004808!8.65e-21!9;UBERON:0001277!8.65e-21!9;UBERON:0001242!8.25e-14!13;UBERON:0000060!8.25e-14!13;UBERON:0001262!8.25e-14!13;UBERON:0004786!8.25e-14!13;UBERON:0000490!7.38e-12!66;UBERON:0000344!1.02e-11!15;UBERON:0003929!1.81e-08!55;UBERON:0005911!8.48e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,5.36e-24,9;UBERON:0004808,5.36e-24,9;UBERON:0001277,5.36e-24,9;UBERON:0000485,1.37e-19,11;UBERON:0001242,1.57e-16,13;UBERON:0001262,1.57e-16,13;UBERON:0004786,1.57e-16,13;UBERON:0000344,2.76e-14,15;UBERON:0004923,8.61e-09,24;UBERON:0000490,8.76e-08,66;UBERON:0003929,8.94e-08,55;UBERON:0002394,4.21e-07,1;UBERON:0001281,4.21e-07,1;UBERON:0000353,4.21e-07,1;UBERON:0003497,4.21e-07,1;UBERON:0003909,4.21e-07,1;UBERON:0003928,4.21e-07,1;UBERON:0003835,4.21e-07,1;UBERON:0003513,4.21e-07,1;UBERON:0001280,4.21e-07,1;UBERON:0004647,4.21e-07,1;UBERON:0002294,4.21e-07,1;UBERON:0001173,4.21e-07,1;UBERON:0004912,4.21e-07,1;UBERON:0005171,4.21e-07,1;UBERON:0002367,7.23e-07,1;UBERON:0009846,7.23e-07,1;UBERON:0003353,7.23e-07,1;UBERON:0004902,7.23e-07,1;UBERON:0003820,7.23e-07,1;UBERON:0009847,7.23e-07,1 | |||
|phase1_expression=0.320297694209588,2.44282785347553,0.454999239389536,0.30246421130683,4.00716583957078,2.35030980676646,0.700837921786577,0.129123323441576,0.703943610758334,0.70219357896598,0.34243593645101,0,0,0,0,0,0,0,0.137114433605739,0,0,0,0,0,0,0.57423196411502,1.7230479846363,0.430942465371778,0,0,0,1.27006134691926,1.84519436275371,0,1.73310971850765,1.32987716286794,5.71674197534634,0.418531630736908,0,0,2.94115744015507,1.36609096991689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,1.03134418455488,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,0,0,1.61910957491345,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556094498451196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,1.10264199027481,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0,0,0,0.559805809294632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:35020075..35020080,- | |||
}} |
Latest revision as of 16:14, 5 August 2015
Short description: | p@chr18:35020075..35020080, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:35020075..35020080, - |
Coexpression cluster: | MCL_coexpression_mm9:232 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.36e-24 | 9 |
epithelial cell of alimentary canal | 5.36e-24 | 9 |
intestinal crypt stem cell | 1.36e-18 | 3 |
epithelial cell | 1.81e-18 | 25 |
endodermal cell | 1.83e-18 | 20 |
endo-epithelial cell | 2.76e-14 | 15 |
brush border epithelial cell | 7.51e-10 | 6 |
gut absorptive cell | 7.51e-10 | 6 |
enterocyte | 7.51e-10 | 6 |
erythroid lineage cell | 1.02e-08 | 3 |
erythroblast | 1.02e-08 | 3 |
erythroid progenitor cell | 1.02e-08 | 3 |
proerythroblast | 1.02e-08 | 3 |
columnar/cuboidal epithelial cell | 1.63e-08 | 7 |
lining cell | 4.21e-07 | 1 |
meso-epithelial cell | 4.21e-07 | 1 |
endothelial cell | 4.21e-07 | 1 |
endothelial cell of sinusoid | 4.21e-07 | 1 |
endothelial cell of hepatic sinusoid | 4.21e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 5.36e-24 | 9 |
gastrointestinal system epithelium | 5.36e-24 | 9 |
intestinal epithelium | 5.36e-24 | 9 |
simple columnar epithelium | 1.37e-19 | 11 |
intestinal mucosa | 1.57e-16 | 13 |
wall of intestine | 1.57e-16 | 13 |
gastrointestinal system mucosa | 1.57e-16 | 13 |
mucosa | 2.76e-14 | 15 |
organ component layer | 8.61e-09 | 24 |
unilaminar epithelium | 8.76e-08 | 66 |
gut epithelium | 8.94e-08 | 55 |
bile duct | 4.21e-07 | 1 |
hepatic sinusoid | 4.21e-07 | 1 |
parenchyma | 4.21e-07 | 1 |
abdomen blood vessel | 4.21e-07 | 1 |
sinusoid | 4.21e-07 | 1 |
digestive system duct | 4.21e-07 | 1 |
abdominal segment blood vessel | 4.21e-07 | 1 |
trunk blood vessel | 4.21e-07 | 1 |
liver parenchyma | 4.21e-07 | 1 |
liver lobule | 4.21e-07 | 1 |
biliary system | 4.21e-07 | 1 |
biliary tree | 4.21e-07 | 1 |
biliary bud | 4.21e-07 | 1 |
hepatic duct | 4.21e-07 | 1 |
prostate gland | 7.23e-07 | 1 |
embryonic cloacal epithelium | 7.23e-07 | 1 |
epithelium of hindgut | 7.23e-07 | 1 |
urogenital sinus epithelium | 7.23e-07 | 1 |
prostate bud | 7.23e-07 | 1 |
prostate field | 7.23e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.02e-08 | 3 |
immune system cancer | 1.02e-08 | 3 |
leukemia | 1.02e-08 | 3 |