FFCP PHASE1:Mm9::chr18:34166575..34166643,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=13824|HGNC=|UniProt=P52963,Q3USC8|association_with_transcript=216bp_to_ENSMUST00000025234,NM_013512,uc008ejz.1_5end|description=CAGE_peak_1_at_Epb4.1l4a_5end|id=chr18:34166575..34166643,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001008!7.87e-09!17;UBERON:0002108!1.02e-08!16;UBERON:0005409!1.11e-08!59;UBERON:0006554!3.75e-08!16;UBERON:0000160!7.26e-08!43;UBERON:0001045!7.93e-08!13;UBERON:0001264!2.23e-07!12;UBERON:0003922!2.23e-07!12;UBERON:0002114!2.23e-07!12;UBERON:0003923!2.23e-07!12;UBERON:0003924!2.23e-07!12;UBERON:0003921!2.23e-07!12;UBERON:0002113!2.94e-07!14;UBERON:0003918!2.94e-07!14;UBERON:0005095!2.94e-07!14;UBERON:0007687!2.94e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0001008,8.75e-10,19;UBERON:0006554,4.68e-09,18;UBERON:0001264,7.10e-08,12;UBERON:0002113,9.58e-08,14;UBERON:0003918,9.58e-08,14;UBERON:0011143,9.58e-08,14;UBERON:0005095,9.58e-08,14;UBERON:0007687,9.58e-08,14|phase1_expression=3.04282809499109,1.04692622291808,1.81999695755814,1.81478526784098,3.00537437967808,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33720779770456,0,0,0.799962113967033,1.37645568640302,1.72269589234506,2.15380998079537,0.646413698057667,9.31114755336232,3.52842181663903,2.43903561720835,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.912392380975631,0.183546752161682,0,1.74420125104357,2.63623419281366,1.1665793944457,0.419959264876088,0,0,0,0,0.257259436035947,0.85960031981627,0.515672092277442,0.202316460859598,1.5869729378161,2.53532561402472,0.338844532069132,0,0,0,0,0.599200221036809,0.384218305321555,0.311068836925433,0.405017814995072,0.420649922702764,0,0,0.489963196859816,0.479227355091182,0.919218786610021,0,0,1.0752457327937,1.45074916503213,0.640413505216868,0,0.279182999001381,0.56276261003168,0.15279824777681,0.294628585473668,0.142371680799103,0,2.04460721999597,1.13357340160178,12.7540375028738,0,0,0,0,0.448026887097336,0.983110940922263,0.340860645156116,1.03914401841148,0.35333957451034,7.04217098883402,0,0,0,6.71122227134764,6.08063677140237,9.0994400102661,2.2836775943812,0,0.593768556259299,0.346970653532272,1.52232739156071,0.691846491768175,0.904335843315735,0.352766121407114,0.125666591329675,3.21353458054686,1.73519228303894,0,0.970601099684455,0.883366073841574,0,5.59175283654366,0,0,2.29911349687732,0,0,0,0.898743836428936,0.457500602818626,0.376963056338593,0.173824320192276,0,1.0389402227978,0.324482526135515,3.97173519016234,2.98576729464223,8.33985102831127,8.41767423545896,3.513251959993,2.06911893990126,5.22180176435513,2.41127708537144,4.08218994907967,3.71529788826064,3.09215691047105,7.76110112217047,1.94011193639558,1.32374256117473,2.11141348996739,2.41115305670332,3.61461423993277,2.78601733217733,2.67516777330327,1.59227413454795,0,0.257347907114715,0,0.621377317606506,0,0.720248245844059,0.23674473558521,0.787056926989615,0.617068451549513,1.86027155800326,0.804820204198858,1.28441876603886,1.6455984991348,1.64167464079095,2.67527071501324,1.31579988682799,1.09775057645525,1.61047702512446,0.210289948564127,1.13195073617213,0.330418782983798,1.32225283331772,1.49301775374664,4.41249676534833,4.51036114627327,5.64713868945359,3.7804267453628,4.37518940058886,4.74529061544512,5.43506550589236,6.28338022000674,2.98434708061726,4.28920991662064,3.59527763461689,1.72910439899755,3.18626037206988,3.79335801906163,3.42745537829186,4.50830942692322,5.29493452397817,5.81857461502877,5.82127305089644,8.53693251177473,4.87113488332687,8.00693511991011,6.29325536001183,0.296452627087149,0,0.393117990226406,0.224862112384854,0.202860121388503,0,0.50925170356284,0,0.162135226775035,0,0,1.11642284300551,1.87222603868736,0,0.538192240565737,0,4.24932337383191,0.568474235311454,1.79261474086228,3.39490171550376,2.58159273117352,4.52266895092903,4.04674189506223,4.29294025287157,2.52216230569906,1.55025282754142,2.55127629851979,2.78567635016755,4.14443956478149,2.74833211304872,0,0,2.95058563811422,8.55403913544671,0,0.703270119553219,0.819674726883377,1.00988370881749,2.2085575359138,2.73307121007647,3.44677436372478,6.21318874676635,2.89638276307112,5.09537755419898,4.04810701674894,2.63030272120181,1.58115111178609,1.92792789853084,6.10342366395555,3.02711526234334,2.60619134965722,16.0021019283359,9.2921596837974,7.28341908464944,4.83717691143602,5.09233715340925,6.79194353625777,5.22639751504677,7.49442050187841,10.9060118843252,8.55593708123331,7.26884543252377,3.16255825724996,6.18813259489121,18.3837387107046,2.52085531643834,3.10460841078611,4.50107773566344,5.32020700926821,4.10248280484762,3.29098041204242,4.87143918583359,2.11204537257339,5.08396970073168,4.6310963591542,10.8824926941377,3.22928853391811,3.61877549568935,3.10368094408155,6.40149509005739,7.28702091574627,0.741701208042039,0,0.82554747185289,0.925972636848558,0.188368457004691,0,0,0.509935289981566,0,1.24379976423981,10.5013767981662,4.27053591334533,4.67634774391752,4.42821897369385,3.97267762427491,3.71216358368502,4.5853877770839,6.4469695465762,10.4702376793612,3.24037433229482,6.83473244395618,0,1.04661582230785,0.165458490457098,0.777804753376191,0.516639293910924,1.01373675294467,0.469428954583016,0.911430693907651,0.943734099831398,0.241584120826006,0.288030006257865,0.948033361884535,3.64905387522296,1.95150818613172,2.33857481360031,2.32734704367726,0.79472541912506,1.20195449519969,0.443068581523732,1.21159739937777,0.685861259894999,0.907435666231565,0.584747284438515,1.05833025804362,0.935015217452552,8.61575457737803,0.887943813496259,0.358855426437903,1.51096154727671,6.56844619709447,3.75364950902364,12.8206136987086,16.0776284309299,11.5361583928134,0.564751842617067,0,0,0.343706364687375,0,0,0,0,0,0,1.45302286617847,3.19219898720825,1.19513524027894,2.18796045361465,0.838452650511929,1.65459157605013,2.66696073361938,1.64828045791115,1.28367683836726,2.02157769411038,1.77435509923168,1.88626341386076,2.1537546718073,1.6646539625266,1.89537047553524,1.90517476513229,2.54945517078682,1.73618298417335,1.64834360321323,1.76638704161277,1.71434626192708,2.12970967391205,1.66905332963125,2.61623549938191,1.31753132581463,2.62305284464197,2.74391959309159,1.57841826862706,1.90125759384206,2.24456908663095,1.66089025373844,2.36410757701352,2.04615521584845,2.78886314134739,2.12197272079256,1.99848462350357,1.87145286756327,2.14871054048298,0.382576664137687,1.10295709559758,0.695603506861264|short_description=p1@Epb4.1l4a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13824 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P52963,uniprot:Q3USC8 | |||
|association_with_transcript=216bp_to_ENSMUST00000025234,NM_013512,uc008ejz.1_5end | |||
|cluster_id=chr18:34166575..34166643,- | |||
|description=CAGE_peak_1_at_Epb4.1l4a_5end | |||
|id=chr18:34166575..34166643,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001008!7.87e-09!17;UBERON:0002108!1.02e-08!16;UBERON:0005409!1.11e-08!59;UBERON:0006554!3.75e-08!16;UBERON:0000160!7.26e-08!43;UBERON:0001045!7.93e-08!13;UBERON:0001264!2.23e-07!12;UBERON:0003922!2.23e-07!12;UBERON:0002114!2.23e-07!12;UBERON:0003923!2.23e-07!12;UBERON:0003924!2.23e-07!12;UBERON:0003921!2.23e-07!12;UBERON:0002113!2.94e-07!14;UBERON:0003918!2.94e-07!14;UBERON:0005095!2.94e-07!14;UBERON:0007687!2.94e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001008,8.75e-10,19;UBERON:0006554,4.68e-09,18;UBERON:0001264,7.10e-08,12;UBERON:0002113,9.58e-08,14;UBERON:0003918,9.58e-08,14;UBERON:0011143,9.58e-08,14;UBERON:0005095,9.58e-08,14;UBERON:0007687,9.58e-08,14 | |||
|phase1_expression=3.04282809499109,1.04692622291808,1.81999695755814,1.81478526784098,3.00537437967808,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33720779770456,0,0,0.799962113967033,1.37645568640302,1.72269589234506,2.15380998079537,0.646413698057667,9.31114755336232,3.52842181663903,2.43903561720835,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.912392380975631,0.183546752161682,0,1.74420125104357,2.63623419281366,1.1665793944457,0.419959264876088,0,0,0,0,0.257259436035947,0.85960031981627,0.515672092277442,0.202316460859598,1.5869729378161,2.53532561402472,0.338844532069132,0,0,0,0,0.599200221036809,0.384218305321555,0.311068836925433,0.405017814995072,0.420649922702764,0,0,0.489963196859816,0.479227355091182,0.919218786610021,0,0,1.0752457327937,1.45074916503213,0.640413505216868,0,0.279182999001381,0.56276261003168,0.15279824777681,0.294628585473668,0.142371680799103,0,2.04460721999597,1.13357340160178,12.7540375028738,0,0,0,0,0.448026887097336,0.983110940922263,0.340860645156116,1.03914401841148,0.35333957451034,7.04217098883402,0,0,0,6.71122227134764,6.08063677140237,9.0994400102661,2.2836775943812,0,0.593768556259299,0.346970653532272,1.52232739156071,0.691846491768175,0.904335843315735,0.352766121407114,0.125666591329675,3.21353458054686,1.73519228303894,0,0.970601099684455,0.883366073841574,0,5.59175283654366,0,0,2.29911349687732,0,0,0,0.898743836428936,0.457500602818626,0.376963056338593,0.173824320192276,0,1.0389402227978,0.324482526135515,3.97173519016234,2.98576729464223,8.33985102831127,8.41767423545896,3.513251959993,2.06911893990126,5.22180176435513,2.41127708537144,4.08218994907967,3.71529788826064,3.09215691047105,7.76110112217047,1.94011193639558,1.32374256117473,2.11141348996739,2.41115305670332,3.61461423993277,2.78601733217733,2.67516777330327,1.59227413454795,0,0.257347907114715,0,0.621377317606506,0,0.720248245844059,0.23674473558521,0.787056926989615,0.617068451549513,1.86027155800326,0.804820204198858,1.28441876603886,1.6455984991348,1.64167464079095,2.67527071501324,1.31579988682799,1.09775057645525,1.61047702512446,0.210289948564127,1.13195073617213,0.330418782983798,1.32225283331772,1.49301775374664,4.41249676534833,4.51036114627327,5.64713868945359,3.7804267453628,4.37518940058886,4.74529061544512,5.43506550589236,6.28338022000674,2.98434708061726,4.28920991662064,3.59527763461689,1.72910439899755,3.18626037206988,3.79335801906163,3.42745537829186,4.50830942692322,5.29493452397817,5.81857461502877,5.82127305089644,8.53693251177473,4.87113488332687,8.00693511991011,6.29325536001183,0.296452627087149,0,0.393117990226406,0.224862112384854,0.202860121388503,0,0.50925170356284,0,0.162135226775035,0,0,1.11642284300551,1.87222603868736,0,0.538192240565737,0,4.24932337383191,0.568474235311454,1.79261474086228,3.39490171550376,2.58159273117352,4.52266895092903,4.04674189506223,4.29294025287157,2.52216230569906,1.55025282754142,2.55127629851979,2.78567635016755,4.14443956478149,2.74833211304872,0,0,2.95058563811422,8.55403913544671,0,0.703270119553219,0.819674726883377,1.00988370881749,2.2085575359138,2.73307121007647,3.44677436372478,6.21318874676635,2.89638276307112,5.09537755419898,4.04810701674894,2.63030272120181,1.58115111178609,1.92792789853084,6.10342366395555,3.02711526234334,2.60619134965722,16.0021019283359,9.2921596837974,7.28341908464944,4.83717691143602,5.09233715340925,6.79194353625777,5.22639751504677,7.49442050187841,10.9060118843252,8.55593708123331,7.26884543252377,3.16255825724996,6.18813259489121,18.3837387107046,2.52085531643834,3.10460841078611,4.50107773566344,5.32020700926821,4.10248280484762,3.29098041204242,4.87143918583359,2.11204537257339,5.08396970073168,4.6310963591542,10.8824926941377,3.22928853391811,3.61877549568935,3.10368094408155,6.40149509005739,7.28702091574627,0.741701208042039,0,0.82554747185289,0.925972636848558,0.188368457004691,0,0,0.509935289981566,0,1.24379976423981,10.5013767981662,4.27053591334533,4.67634774391752,4.42821897369385,3.97267762427491,3.71216358368502,4.5853877770839,6.4469695465762,10.4702376793612,3.24037433229482,6.83473244395618,0,1.04661582230785,0.165458490457098,0.777804753376191,0.516639293910924,1.01373675294467,0.469428954583016,0.911430693907651,0.943734099831398,0.241584120826006,0.288030006257865,0.948033361884535,3.64905387522296,1.95150818613172,2.33857481360031,2.32734704367726,0.79472541912506,1.20195449519969,0.443068581523732,1.21159739937777,0.685861259894999,0.907435666231565,0.584747284438515,1.05833025804362,0.935015217452552,8.61575457737803,0.887943813496259,0.358855426437903,1.51096154727671,6.56844619709447,3.75364950902364,12.8206136987086,16.0776284309299,11.5361583928134,0.564751842617067,0,0,0.343706364687375,0,0,0,0,0,0,1.45302286617847,3.19219898720825,1.19513524027894,2.18796045361465,0.838452650511929,1.65459157605013,2.66696073361938,1.64828045791115,1.28367683836726,2.02157769411038,1.77435509923168,1.88626341386076,2.1537546718073,1.6646539625266,1.89537047553524,1.90517476513229,2.54945517078682,1.73618298417335,1.64834360321323,1.76638704161277,1.71434626192708,2.12970967391205,1.66905332963125,2.61623549938191,1.31753132581463,2.62305284464197,2.74391959309159,1.57841826862706,1.90125759384206,2.24456908663095,1.66089025373844,2.36410757701352,2.04615521584845,2.78886314134739,2.12197272079256,1.99848462350357,1.87145286756327,2.14871054048298,0.382576664137687,1.10295709559758,0.695603506861264 | |||
|short_description=p1@Epb4.1l4a | |||
}} |
Revision as of 15:55, 5 August 2015
Short description: | p1@Epb4.1l4a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Epb4.1l4a_5end |
Coexpression cluster: | NA |
Association with transcript: | 216bp_to_ENSMUST00000025234, NM_013512, uc008ejz.1_5end |
EntrezGene: | 13824 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
renal system | 8.75e-10 | 19 |
urinary system structure | 4.68e-09 | 18 |
pancreas | 7.10e-08 | 12 |
kidney | 9.58e-08 | 14 |
kidney mesenchyme | 9.58e-08 | 14 |
upper urinary tract | 9.58e-08 | 14 |
kidney rudiment | 9.58e-08 | 14 |
kidney field | 9.58e-08 | 14 |