FFCP PHASE1:Mm9::chr4:53156963..53156983,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=715|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:53156963..53156983,-|id=chr4:53156963..53156983,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009854!2.44e-18!23;UBERON:0009856!2.44e-18!23;UBERON:0002107!6.52e-18!22;UBERON:0007499!6.52e-18!22;UBERON:0006925!6.52e-18!22;UBERON:0009497!6.52e-18!22;UBERON:0000015!6.52e-18!22;UBERON:0002423!6.52e-18!22;UBERON:0006235!6.52e-18!22;UBERON:0008835!6.52e-18!22;UBERON:0003894!6.52e-18!22;UBERON:0004161!6.52e-18!22;UBERON:0008836!6.52e-18!22;UBERON:0002365!1.40e-17!25;UBERON:0002330!1.40e-17!25;UBERON:0005172!2.88e-11!49;UBERON:0005173!2.88e-11!49;UBERON:0002417!2.88e-11!49;UBERON:0000916!2.88e-11!49;UBERON:0005256!8.10e-11!47;UBERON:0003914!2.97e-08!47;UBERON:0005177!3.84e-07!85;UBERON:0009569!4.53e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0009854,1.38e-29,23;UBERON:0009856,1.38e-29,23;UBERON:0002107,6.90e-29,22;UBERON:0007499,6.90e-29,22;UBERON:0006925,6.90e-29,22;UBERON:0009497,6.90e-29,22;UBERON:0000015,6.90e-29,22;UBERON:0002423,6.90e-29,22;UBERON:0006235,6.90e-29,22;UBERON:0008835,6.90e-29,22;UBERON:0003894,6.90e-29,22;UBERON:0004161,6.90e-29,22;UBERON:0008836,6.90e-29,22;UBERON:0002365,8.65e-29,25;UBERON:0002330,8.65e-29,25;UBERON:0005256,6.44e-14,45;UBERON:0005172,3.60e-12,49;UBERON:0005173,3.60e-12,49;UBERON:0002417,3.60e-12,49;UBERON:0000916,3.60e-12,49;UBERON:0003914,8.29e-11,47;UBERON:0002530,6.82e-09,65;UBERON:0002368,1.25e-08,60;UBERON:0003104,2.25e-08,61;UBERON:0009142,2.25e-08,61;UBERON:0003929,1.68e-07,55;UBERON:0009569,3.14e-07,66|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0.274228867211478,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0.449949858640699,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0.0914876436024097,0,0,0,0,0,0.142371680799103,0,0.227178579999552,0,0,12.9063581547208,15.6393406752783,49.1129904390414,78.622946511168,40.7704467258575,5.61777680527007,0,0,0,0,0,0,0,0,0,0,4.45317130904334,0,0.593768556259299,2.4287945747259,3.34912026143355,4.38169444786511,0.904335843315735,0.470354828542819,0.879666139307728,6.67426412882809,2.89198713839823,0,0,0,0.484875253135222,1.86391761218122,0.292780797011547,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0.210441855886474,0,0,0,0.90422890701429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.938104239924385,0.36012412292203,0,0,0,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,0,0.102904612379284,0,0,0,0.696710015581316,0.257734922644187,0,0,0.380451252225118,0,0,0.502670417600539,0,0,0,0,0,0,0.913988100877831,0,0,0.193952487167626,0,0,0,0,0,18.0836102523161,10.1775514486817,15.9212786041694,23.8353839127945,29.0089973585559,44.8589517139495,47.6150342831255,50.6345201913427,6.80967952455149,29.6526326243128,31.629005436018,32.3762624471598,35.8843324081745,25.7630455506054,50.4106731996573,7.71909634181387,0,0.189491411770485,0,0,0.469380496577004,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,2.45882136509518,1.65562047782839,0.160550589987792,0.117211686592203,0,0,0.315508219416257,0,0,0,0,0.283076530788832,0,0,0,0,0.425820255624806,0.35613120733451,0,0.164970122972535,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0.316036757935816,1.05418608574999,0,0,0,0.129358683782755,0,0,0,0,0,0,1.27099242518292,0.220528398054962,0.32977250588296,0,0.482503399425247,0,0,0,0.18542530201051,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0.954670618015114,0.158167996790568,0.406638934253697,0.86404272657441,0.836353184057875,0.655087691238533,1.07891477107857,3.55409859618945,0.26175594198403,0,0,0,0,0,0,0,0,0,0.39061315453185,0,0,0.288030006257865,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,1.19707462020309,1.19513524027894,6.80698807791223,2.93458427679175,5.51530525350042,6.66740183404846,6.59312183164461,6.73930340142812,4.80124702351215,6.59046179714623,3.58390048633545,6.74218853783153,5.37811280200902,6.03072424033939,4.76293691283074,4.51948871184936,4.05109362973781,4.12085900803307,5.15196220470391,7.54312355247914,4.61437096014278,2.86123427936785,4.65108533223451,5.08190654242785,5.33072029717562,3.10977553883713,5.5244639401947,3.93831930152999,3.36685362994643,3.91495559809775,3.44765688314472,4.50154147486658,4.18329471202108,4.05103883060397,0,2.33931608445408,1.28922632428979,0,0.220591419119515,0|short_description=p@chr4:53156963..53156983,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=715 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:53156963..53156983,- | |||
|description=CAGE_peak_at_chr4:53156963..53156983,- | |||
|id=chr4:53156963..53156983,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009854!2.44e-18!23;UBERON:0009856!2.44e-18!23;UBERON:0002107!6.52e-18!22;UBERON:0007499!6.52e-18!22;UBERON:0006925!6.52e-18!22;UBERON:0009497!6.52e-18!22;UBERON:0000015!6.52e-18!22;UBERON:0002423!6.52e-18!22;UBERON:0006235!6.52e-18!22;UBERON:0008835!6.52e-18!22;UBERON:0003894!6.52e-18!22;UBERON:0004161!6.52e-18!22;UBERON:0008836!6.52e-18!22;UBERON:0002365!1.40e-17!25;UBERON:0002330!1.40e-17!25;UBERON:0005172!2.88e-11!49;UBERON:0005173!2.88e-11!49;UBERON:0002417!2.88e-11!49;UBERON:0000916!2.88e-11!49;UBERON:0005256!8.10e-11!47;UBERON:0003914!2.97e-08!47;UBERON:0005177!3.84e-07!85;UBERON:0009569!4.53e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,1.38e-29,23;UBERON:0009856,1.38e-29,23;UBERON:0002107,6.90e-29,22;UBERON:0007499,6.90e-29,22;UBERON:0006925,6.90e-29,22;UBERON:0009497,6.90e-29,22;UBERON:0000015,6.90e-29,22;UBERON:0002423,6.90e-29,22;UBERON:0006235,6.90e-29,22;UBERON:0008835,6.90e-29,22;UBERON:0003894,6.90e-29,22;UBERON:0004161,6.90e-29,22;UBERON:0008836,6.90e-29,22;UBERON:0002365,8.65e-29,25;UBERON:0002330,8.65e-29,25;UBERON:0005256,6.44e-14,45;UBERON:0005172,3.60e-12,49;UBERON:0005173,3.60e-12,49;UBERON:0002417,3.60e-12,49;UBERON:0000916,3.60e-12,49;UBERON:0003914,8.29e-11,47;UBERON:0002530,6.82e-09,65;UBERON:0002368,1.25e-08,60;UBERON:0003104,2.25e-08,61;UBERON:0009142,2.25e-08,61;UBERON:0003929,1.68e-07,55;UBERON:0009569,3.14e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0.274228867211478,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0.449949858640699,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0.0914876436024097,0,0,0,0,0,0.142371680799103,0,0.227178579999552,0,0,12.9063581547208,15.6393406752783,49.1129904390414,78.622946511168,40.7704467258575,5.61777680527007,0,0,0,0,0,0,0,0,0,0,4.45317130904334,0,0.593768556259299,2.4287945747259,3.34912026143355,4.38169444786511,0.904335843315735,0.470354828542819,0.879666139307728,6.67426412882809,2.89198713839823,0,0,0,0.484875253135222,1.86391761218122,0.292780797011547,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0.210441855886474,0,0,0,0.90422890701429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.938104239924385,0.36012412292203,0,0,0,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,0,0.102904612379284,0,0,0,0.696710015581316,0.257734922644187,0,0,0.380451252225118,0,0,0.502670417600539,0,0,0,0,0,0,0.913988100877831,0,0,0.193952487167626,0,0,0,0,0,18.0836102523161,10.1775514486817,15.9212786041694,23.8353839127945,29.0089973585559,44.8589517139495,47.6150342831255,50.6345201913427,6.80967952455149,29.6526326243128,31.629005436018,32.3762624471598,35.8843324081745,25.7630455506054,50.4106731996573,7.71909634181387,0,0.189491411770485,0,0,0.469380496577004,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,2.45882136509518,1.65562047782839,0.160550589987792,0.117211686592203,0,0,0.315508219416257,0,0,0,0,0.283076530788832,0,0,0,0,0.425820255624806,0.35613120733451,0,0.164970122972535,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0.316036757935816,1.05418608574999,0,0,0,0.129358683782755,0,0,0,0,0,0,1.27099242518292,0.220528398054962,0.32977250588296,0,0.482503399425247,0,0,0,0.18542530201051,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0.954670618015114,0.158167996790568,0.406638934253697,0.86404272657441,0.836353184057875,0.655087691238533,1.07891477107857,3.55409859618945,0.26175594198403,0,0,0,0,0,0,0,0,0,0.39061315453185,0,0,0.288030006257865,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,1.19707462020309,1.19513524027894,6.80698807791223,2.93458427679175,5.51530525350042,6.66740183404846,6.59312183164461,6.73930340142812,4.80124702351215,6.59046179714623,3.58390048633545,6.74218853783153,5.37811280200902,6.03072424033939,4.76293691283074,4.51948871184936,4.05109362973781,4.12085900803307,5.15196220470391,7.54312355247914,4.61437096014278,2.86123427936785,4.65108533223451,5.08190654242785,5.33072029717562,3.10977553883713,5.5244639401947,3.93831930152999,3.36685362994643,3.91495559809775,3.44765688314472,4.50154147486658,4.18329471202108,4.05103883060397,0,2.33931608445408,1.28922632428979,0,0.220591419119515,0 | |||
|short_description=p@chr4:53156963..53156983,- | |||
}} |
Latest revision as of 14:26, 5 August 2015
Short description: | p@chr4:53156963..53156983, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:53156963..53156983, - |
Coexpression cluster: | MCL_coexpression_mm9:715 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
digestive tract diverticulum | 1.38e-29 | 23 |
sac | 1.38e-29 | 23 |
liver | 6.90e-29 | 22 |
epithelial sac | 6.90e-29 | 22 |
digestive gland | 6.90e-29 | 22 |
epithelium of foregut-midgut junction | 6.90e-29 | 22 |
anatomical boundary | 6.90e-29 | 22 |
hepatobiliary system | 6.90e-29 | 22 |
foregut-midgut junction | 6.90e-29 | 22 |
hepatic diverticulum | 6.90e-29 | 22 |
liver primordium | 6.90e-29 | 22 |
septum transversum | 6.90e-29 | 22 |
liver bud | 6.90e-29 | 22 |
exocrine gland | 8.65e-29 | 25 |
exocrine system | 8.65e-29 | 25 |
trunk mesenchyme | 6.44e-14 | 45 |
abdomen element | 3.60e-12 | 49 |
abdominal segment element | 3.60e-12 | 49 |
abdominal segment of trunk | 3.60e-12 | 49 |
abdomen | 3.60e-12 | 49 |
epithelial tube | 8.29e-11 | 47 |
gland | 6.82e-09 | 65 |
endocrine gland | 1.25e-08 | 60 |
mesenchyme | 2.25e-08 | 61 |
entire embryonic mesenchyme | 2.25e-08 | 61 |
gut epithelium | 1.68e-07 | 55 |
subdivision of trunk | 3.14e-07 | 66 |