Personal tools

FFCP PHASE1:Mm9::chr18:15562167..15562176,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=11829|HGNC=|MCL_coexpression_id=972|UniProt=P55088,E9Q1W2|association_with_transcript=16bp_to_ENSMUST00000079081,ENSMUST00000168758,NM_009700,uc008eds.2_5end|description=CAGE_peak_5_at_Aqp4_5end|id=chr18:15562167..15562176,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000117,1.30e-07,23;CL:0000337,1.30e-07,23;CL:0002610,3.68e-07,3;CL:0002614,6.79e-07,3;CL:0002250,9.40e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.82e-11!52;UBERON:0005068!1.82e-11!52;UBERON:0006241!1.82e-11!52;UBERON:0007135!1.82e-11!52;UBERON:0000955!1.07e-10!50;UBERON:0006238!1.07e-10!50;UBERON:0002616!4.39e-10!49;UBERON:0001017!6.21e-10!73;UBERON:0005743!6.21e-10!73;UBERON:0000073!3.40e-09!75;UBERON:0001016!3.40e-09!75;UBERON:0000033!2.22e-08!63;UBERON:0000025!3.03e-08!114;UBERON:0004111!2.50e-07!122;UBERON:0003076!4.05e-07!12;UBERON:0003057!4.05e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.22e-19,73;UBERON:0001016,6.44e-19,75;UBERON:0000073,9.44e-19,54;UBERON:0001049,2.91e-16,52;UBERON:0005068,2.91e-16,52;UBERON:0006241,2.91e-16,52;UBERON:0007135,2.91e-16,52;UBERON:0004121,1.95e-14,95;UBERON:0000924,1.95e-14,95;UBERON:0006601,1.95e-14,95;UBERON:0003076,2.99e-14,12;UBERON:0003057,2.99e-14,12;UBERON:0002346,2.66e-13,64;UBERON:0003075,2.66e-13,64;UBERON:0007284,2.66e-13,64;UBERON:0000955,1.41e-11,47;UBERON:0006238,1.41e-11,47;UBERON:0010371,6.30e-11,73;UBERON:0002616,2.02e-10,46;UBERON:0002020,3.96e-10,34;UBERON:0002240,1.24e-09,6;UBERON:0005174,1.24e-09,6;UBERON:0001137,1.24e-09,6;UBERON:0002950,6.50e-09,4;UBERON:0001891,6.50e-09,4;UBERON:0009616,6.50e-09,4;UBERON:0010286,6.50e-09,4;UBERON:0011216,4.88e-08,194;UBERON:0001948,1.49e-07,5;UBERON:0002315,1.49e-07,5;UBERON:0010314,1.76e-07,92;UBERON:0004684,3.68e-07,3;UBERON:0002275,3.68e-07,3;UBERON:0002038,6.79e-07,3;UBERON:0009663,6.79e-07,3;UBERON:0009661,6.79e-07,3;UBERON:0000125,6.79e-07,3;UBERON:0002308,6.79e-07,3;UBERON:0003080,8.27e-07,40|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0.319984845586813,0.22940928106717,0,0,0.430942465371778,0.380046838912748,0.504060259519861,0.886922042621219,0,0,0,3.17736781726402,3.32469290716985,2.6542016314108,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.659058548203415,0.388859798148567,0.55994568650145,5.75010257459886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49800055259202,3.45796474789399,0,0,0,3.42781181284564,3.53389665522582,0,0,0,3.30347642998166,4.46905683298157,3.5329502648936,0.131886287730194,0,0.52091337055676,3.62937898701795,1.12552522006336,5.65353516774197,6.18720029494702,6.26435395516053,0.186399445825301,0,0,0,0.860423876981386,0,0,0,0.448026887097336,1.26399978118577,0,0,0,0.985903938436763,0,0,0,0.865964164044856,0.760079596425296,0.505524445014783,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0.323533699894818,0.883366073841574,2.42437626567611,1.86391761218122,2.63502717310392,5.44561437714983,0.766371165625774,0,0,0,5.24267237916879,2.74500361691176,0.251308704225729,3.12883776346098,3.06858548796397,4.1557608911912,3.56930778749067,0,0.124406970610093,0,0,0,0,0.180062129805349,0,0,0,0.0937017245597288,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0.540186184383045,0.473489471170421,0.196764231747404,0.617068451549513,0.930135779001631,0,0.700592054203017,0.658239399653922,0.656669856316381,0.56748166682099,0.730999937126662,0.658650345873152,0.134206418760372,4.41608891984667,0.514523061896422,0,0.264450566663544,0,0,0,0.201683524623343,0.444756087689741,0,0.949058123089023,0.329397909448022,1.25667604400135,0.397912944082302,0.58489226135736,0,1.29682829924817,1.39398891278057,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0.350679099451593,0.758838445491087,0.885660887877613,0.941992367048249,0.740382983530803,0,0,0,0,0,0.241177159752417,0,0,0,0.549122826376163,1.43768206527355,0.744281895337007,0,0.757736633841335,0.179397413521912,0,0.739012760666419,0.189491411770485,0.325929952884052,0,0,0,0.714130922658041,0.195133647857799,0.315270288212382,0,0.159454768657487,0,0.518054945597687,0.144649058581512,0,0,0,0,9.47248480927973,10.0802050469295,0,4.29200576247434,0,0,0,0,0,0,0,0,0,4.4984984299053,0,0,0,0.329940245945071,0,0,0.604647113929502,0.943025398779491,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0.388076051348264,0.214337035031592,0.177340233642274,0.178368817602071,0.493647061806363,0,0,0,0,0,0,0.120625849856312,0,0.164140899745061,0.874442509889552,16.8737024829564,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0.108005340821801,0.418176592028937,0,0,0.0826534557253359,0.523511883968059,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0.453460767230423,0,0,0,0,0,0.183151624267265,0,0,1.12950368523413,1.38097570952153,0.572895513439397,1.3748254587495,0.685082519770642,0,0,0.45032120322422,2.26571204492102,1.03552062350364,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0.252697211763798,0,0,0.468207537349412,0.320125762024346,0.34461281373368,0.476293691283074,0.347652977834566,0.38581844092741,0,0.441596760403192,0.685738504770831,0,0.238436189947321,0.145346416632329,0.188218760830661,0.423073039458382,0.365855945745545,0.263069711437843,0,0.561142271657738,0.237270036248348,0.197008964751127,0.409231043169689,0.77468420592983,0,0.499621155875892,0,0.214871054048298,0.191288332068843,0.661774257358546,1.39120701372253|short_description=p5@Aqp4}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:11829
|HGNC=
|MCL_coexpression_id=972
|TSSclassifier=NA
|UniProt=uniprot:P55088,uniprot:E9Q1W2
|association_with_transcript=16bp_to_ENSMUST00000079081,ENSMUST00000168758,NM_009700,uc008eds.2_5end
|cluster_id=chr18:15562167..15562176,-
|description=CAGE_peak_5_at_Aqp4_5end
|id=chr18:15562167..15562176,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000117,1.30e-07,23;CL:0000337,1.30e-07,23;CL:0002610,3.68e-07,3;CL:0002614,6.79e-07,3;CL:0002250,9.40e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.82e-11!52;UBERON:0005068!1.82e-11!52;UBERON:0006241!1.82e-11!52;UBERON:0007135!1.82e-11!52;UBERON:0000955!1.07e-10!50;UBERON:0006238!1.07e-10!50;UBERON:0002616!4.39e-10!49;UBERON:0001017!6.21e-10!73;UBERON:0005743!6.21e-10!73;UBERON:0000073!3.40e-09!75;UBERON:0001016!3.40e-09!75;UBERON:0000033!2.22e-08!63;UBERON:0000025!3.03e-08!114;UBERON:0004111!2.50e-07!122;UBERON:0003076!4.05e-07!12;UBERON:0003057!4.05e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.22e-19,73;UBERON:0001016,6.44e-19,75;UBERON:0000073,9.44e-19,54;UBERON:0001049,2.91e-16,52;UBERON:0005068,2.91e-16,52;UBERON:0006241,2.91e-16,52;UBERON:0007135,2.91e-16,52;UBERON:0004121,1.95e-14,95;UBERON:0000924,1.95e-14,95;UBERON:0006601,1.95e-14,95;UBERON:0003076,2.99e-14,12;UBERON:0003057,2.99e-14,12;UBERON:0002346,2.66e-13,64;UBERON:0003075,2.66e-13,64;UBERON:0007284,2.66e-13,64;UBERON:0000955,1.41e-11,47;UBERON:0006238,1.41e-11,47;UBERON:0010371,6.30e-11,73;UBERON:0002616,2.02e-10,46;UBERON:0002020,3.96e-10,34;UBERON:0002240,1.24e-09,6;UBERON:0005174,1.24e-09,6;UBERON:0001137,1.24e-09,6;UBERON:0002950,6.50e-09,4;UBERON:0001891,6.50e-09,4;UBERON:0009616,6.50e-09,4;UBERON:0010286,6.50e-09,4;UBERON:0011216,4.88e-08,194;UBERON:0001948,1.49e-07,5;UBERON:0002315,1.49e-07,5;UBERON:0010314,1.76e-07,92;UBERON:0004684,3.68e-07,3;UBERON:0002275,3.68e-07,3;UBERON:0002038,6.79e-07,3;UBERON:0009663,6.79e-07,3;UBERON:0009661,6.79e-07,3;UBERON:0000125,6.79e-07,3;UBERON:0002308,6.79e-07,3;UBERON:0003080,8.27e-07,40
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0.319984845586813,0.22940928106717,0,0,0.430942465371778,0.380046838912748,0.504060259519861,0.886922042621219,0,0,0,3.17736781726402,3.32469290716985,2.6542016314108,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.659058548203415,0.388859798148567,0.55994568650145,5.75010257459886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49800055259202,3.45796474789399,0,0,0,3.42781181284564,3.53389665522582,0,0,0,3.30347642998166,4.46905683298157,3.5329502648936,0.131886287730194,0,0.52091337055676,3.62937898701795,1.12552522006336,5.65353516774197,6.18720029494702,6.26435395516053,0.186399445825301,0,0,0,0.860423876981386,0,0,0,0.448026887097336,1.26399978118577,0,0,0,0.985903938436763,0,0,0,0.865964164044856,0.760079596425296,0.505524445014783,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0.323533699894818,0.883366073841574,2.42437626567611,1.86391761218122,2.63502717310392,5.44561437714983,0.766371165625774,0,0,0,5.24267237916879,2.74500361691176,0.251308704225729,3.12883776346098,3.06858548796397,4.1557608911912,3.56930778749067,0,0.124406970610093,0,0,0,0,0.180062129805349,0,0,0,0.0937017245597288,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0.540186184383045,0.473489471170421,0.196764231747404,0.617068451549513,0.930135779001631,0,0.700592054203017,0.658239399653922,0.656669856316381,0.56748166682099,0.730999937126662,0.658650345873152,0.134206418760372,4.41608891984667,0.514523061896422,0,0.264450566663544,0,0,0,0.201683524623343,0.444756087689741,0,0.949058123089023,0.329397909448022,1.25667604400135,0.397912944082302,0.58489226135736,0,1.29682829924817,1.39398891278057,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0.350679099451593,0.758838445491087,0.885660887877613,0.941992367048249,0.740382983530803,0,0,0,0,0,0.241177159752417,0,0,0,0.549122826376163,1.43768206527355,0.744281895337007,0,0.757736633841335,0.179397413521912,0,0.739012760666419,0.189491411770485,0.325929952884052,0,0,0,0.714130922658041,0.195133647857799,0.315270288212382,0,0.159454768657487,0,0.518054945597687,0.144649058581512,0,0,0,0,9.47248480927973,10.0802050469295,0,4.29200576247434,0,0,0,0,0,0,0,0,0,4.4984984299053,0,0,0,0.329940245945071,0,0,0.604647113929502,0.943025398779491,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0.388076051348264,0.214337035031592,0.177340233642274,0.178368817602071,0.493647061806363,0,0,0,0,0,0,0.120625849856312,0,0.164140899745061,0.874442509889552,16.8737024829564,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0.108005340821801,0.418176592028937,0,0,0.0826534557253359,0.523511883968059,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0.453460767230423,0,0,0,0,0,0.183151624267265,0,0,1.12950368523413,1.38097570952153,0.572895513439397,1.3748254587495,0.685082519770642,0,0,0.45032120322422,2.26571204492102,1.03552062350364,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0.252697211763798,0,0,0.468207537349412,0.320125762024346,0.34461281373368,0.476293691283074,0.347652977834566,0.38581844092741,0,0.441596760403192,0.685738504770831,0,0.238436189947321,0.145346416632329,0.188218760830661,0.423073039458382,0.365855945745545,0.263069711437843,0,0.561142271657738,0.237270036248348,0.197008964751127,0.409231043169689,0.77468420592983,0,0.499621155875892,0,0.214871054048298,0.191288332068843,0.661774257358546,1.39120701372253
|short_description=p5@Aqp4
}}

Revision as of 13:27, 5 August 2015

Short description:p5@Aqp4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Aqp4_5end
Coexpression cluster:MCL_coexpression_mm9:972
Association with transcript: 16bp_to_ENSMUST00000079081, ENSMUST00000168758, NM_009700, uc008eds.2_5end
EntrezGene:11829
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Aqp4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.18
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.53
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.47
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.65
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.19
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.26
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B22.64
cerebellum, neonate N30.CNhs11135.1395-42I25.45
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.24
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D53.13
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F24.16
diencephalon, neonate N30.CNhs11201.1388-42B23.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E84.42
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.76
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C29.47
medulla oblongata, neonate N30.CNhs11200.1396-42A310.08
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.29
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I94.50
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C916.87
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system1.22e-1973
nervous system6.44e-1975
regional part of nervous system9.44e-1954
neural tube2.91e-1652
neural rod2.91e-1652
future spinal cord2.91e-1652
neural keel2.91e-1652
ectoderm-derived structure1.95e-1495
ectoderm1.95e-1495
presumptive ectoderm1.95e-1495
posterior neural tube2.99e-1412
chordal neural plate2.99e-1412
neurectoderm2.66e-1364
neural plate2.66e-1364
presumptive neural plate2.66e-1364
brain1.41e-1147
future brain1.41e-1147
ecto-epithelium6.30e-1173
regional part of brain2.02e-1046
gray matter3.96e-1034
spinal cord1.24e-096
dorsal region element1.24e-096
dorsum1.24e-096
regional part of midbrain6.50e-094
midbrain6.50e-094
presumptive midbrain6.50e-094
midbrain neural tube6.50e-094
organ system subdivision4.88e-08194
regional part of spinal cord1.49e-075
gray matter of spinal cord1.49e-075
structure with developmental contribution from neural crest1.76e-0792
raphe nuclei3.68e-073
reticular formation3.68e-073
substantia nigra6.79e-073
telencephalic nucleus6.79e-073
midbrain nucleus6.79e-073
neural nucleus6.79e-073
nucleus of brain6.79e-073
anterior neural tube8.27e-0740
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr18:15562167..15562176,-&oldid=3904308"