FFCP PHASE1:Mm9::chr1:197002966..197002977,-: Difference between revisions
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{{FFCP|EntrezGene=12902|HGNC=|MCL_coexpression_id=18|UniProt=Q9DC83|association_with_transcript=-57bp_to_ENSMUST00000082321,NM_007758,uc007eez.1,uc007efa.1,uc011wzi.1_5end|description=CAGE_peak_3_at_Cr2_5end|id=chr1:197002966..197002977,-|ontology_enrichment_celltype=CL:0000553!9.48e-17!6;CL:0000556!9.48e-17!6;CL:0000050!6.69e-11!9;CL:0002027!6.52e-09!3;CL:0002006!6.52e-09!3;CL:0002024!6.52e-09!3;CL:0000414!9.00e-09!11;CL:0000839!2.68e-07!13|ontology_enrichment_celltype_v019_2=CL:0000553,9.69e-37,6;CL:0000556,9.69e-37,6;CL:0000050,1.35e-24,9;CL:0000839,4.26e-17,13;CL:0000763,6.38e-14,16;CL:0002031,1.23e-12,25;CL:0002027,2.12e-12,3;CL:0002006,2.12e-12,3;CL:0002024,2.12e-12,3;CL:0000049,9.62e-12,19;CL:0000945,3.74e-10,1;CL:0000236,3.74e-10,1;CL:0000826,3.74e-10,1;CL:0000988,7.55e-10,32;CL:0002032,7.55e-10,32;CL:0000037,7.55e-10,32;CL:0000837,7.55e-10,32;CL:0002320,8.52e-07,46;CL:0000134,8.52e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!8.90e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.19e-14,48;UBERON:0002405,2.19e-14,48;UBERON:0002371,6.38e-14,16;UBERON:0002106,1.66e-13,6;UBERON:0004457,1.66e-13,6;UBERON:0000042,1.66e-13,6;UBERON:0004854,1.66e-13,6;UBERON:0009034,1.66e-13,6;UBERON:0002095,1.66e-13,6;UBERON:0004782,1.66e-13,6;UBERON:0003281,1.66e-13,6;UBERON:0009664,1.66e-13,6;UBERON:0002296,1.66e-13,6;UBERON:0005602,1.66e-13,6;UBERON:0001179,1.66e-13,6;UBERON:0006293,1.66e-13,6;UBERON:0002390,4.66e-12,45;UBERON:0003061,4.66e-12,45;UBERON:0000029,1.63e-10,1;UBERON:0001097,1.63e-10,1;UBERON:0003968,1.63e-10,1;UBERON:0001467,1.63e-10,1;UBERON:0001474,3.73e-10,22;UBERON:0004765,3.73e-10,22;UBERON:0001434,3.73e-10,22;UBERON:0003887,2.36e-08,10;UBERON:0002204,5.41e-07,32;UBERON:0002384,8.52e-07,46|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99798785634096,2.42970320867791,0.699561878128147,16.5617636813075,17.2764186343231,15.2780274647291,0,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4092172119261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,19.6792791571851,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0.898819408654221,0,0,0,0,0,0,0,0.0701358198903186,0.189709611372772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0,0,0,0,0,0.345369963731791,0.144649058581512,0,0,0.491764273019036,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95525554313773,0,0,0,1.6403307326523,2.74533807847827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@Cr2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12902 | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9DC83 | |||
|association_with_transcript=-57bp_to_ENSMUST00000082321,NM_007758,uc007eez.1,uc007efa.1,uc011wzi.1_5end | |||
|cluster_id=chr1:197002966..197002977,- | |||
|description=CAGE_peak_3_at_Cr2_5end | |||
|id=chr1:197002966..197002977,- | |||
|ontology_enrichment_celltype=CL:0000553!9.48e-17!6;CL:0000556!9.48e-17!6;CL:0000050!6.69e-11!9;CL:0002027!6.52e-09!3;CL:0002006!6.52e-09!3;CL:0002024!6.52e-09!3;CL:0000414!9.00e-09!11;CL:0000839!2.68e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,9.69e-37,6;CL:0000556,9.69e-37,6;CL:0000050,1.35e-24,9;CL:0000839,4.26e-17,13;CL:0000763,6.38e-14,16;CL:0002031,1.23e-12,25;CL:0002027,2.12e-12,3;CL:0002006,2.12e-12,3;CL:0002024,2.12e-12,3;CL:0000049,9.62e-12,19;CL:0000945,3.74e-10,1;CL:0000236,3.74e-10,1;CL:0000826,3.74e-10,1;CL:0000988,7.55e-10,32;CL:0002032,7.55e-10,32;CL:0000037,7.55e-10,32;CL:0000837,7.55e-10,32;CL:0002320,8.52e-07,46;CL:0000134,8.52e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.90e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.19e-14,48;UBERON:0002405,2.19e-14,48;UBERON:0002371,6.38e-14,16;UBERON:0002106,1.66e-13,6;UBERON:0004457,1.66e-13,6;UBERON:0000042,1.66e-13,6;UBERON:0004854,1.66e-13,6;UBERON:0009034,1.66e-13,6;UBERON:0002095,1.66e-13,6;UBERON:0004782,1.66e-13,6;UBERON:0003281,1.66e-13,6;UBERON:0009664,1.66e-13,6;UBERON:0002296,1.66e-13,6;UBERON:0005602,1.66e-13,6;UBERON:0001179,1.66e-13,6;UBERON:0006293,1.66e-13,6;UBERON:0002390,4.66e-12,45;UBERON:0003061,4.66e-12,45;UBERON:0000029,1.63e-10,1;UBERON:0001097,1.63e-10,1;UBERON:0003968,1.63e-10,1;UBERON:0001467,1.63e-10,1;UBERON:0001474,3.73e-10,22;UBERON:0004765,3.73e-10,22;UBERON:0001434,3.73e-10,22;UBERON:0003887,2.36e-08,10;UBERON:0002204,5.41e-07,32;UBERON:0002384,8.52e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99798785634096,2.42970320867791,0.699561878128147,16.5617636813075,17.2764186343231,15.2780274647291,0,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4092172119261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,19.6792791571851,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0.898819408654221,0,0,0,0,0,0,0,0.0701358198903186,0.189709611372772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0,0,0,0,0,0.345369963731791,0.144649058581512,0,0,0.491764273019036,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95525554313773,0,0,0,1.6403307326523,2.74533807847827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@Cr2 | |||
}} |
Revision as of 13:04, 5 August 2015
Short description: | p3@Cr2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cr2_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | -57bp_to_ENSMUST00000082321, NM_007758, uc007eez.1, uc007efa.1, uc011wzi.1_5end |
EntrezGene: | 12902 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 9.69e-37 | 6 |
megakaryocyte | 9.69e-37 | 6 |
megakaryocyte-erythroid progenitor cell | 1.35e-24 | 9 |
myeloid lineage restricted progenitor cell | 4.26e-17 | 13 |
myeloid cell | 6.38e-14 | 16 |
hematopoietic lineage restricted progenitor cell | 1.23e-12 | 25 |
CD9-positive, CD41-positive megakaryocyte cell | 2.12e-12 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 2.12e-12 | 3 |
Kit-positive megakaryocyte progenitor cell | 2.12e-12 | 3 |
common myeloid progenitor | 9.62e-12 | 19 |
lymphocyte of B lineage | 3.74e-10 | 1 |
B cell | 3.74e-10 | 1 |
pro-B cell | 3.74e-10 | 1 |
hematopoietic cell | 7.55e-10 | 32 |
hematopoietic oligopotent progenitor cell | 7.55e-10 | 32 |
hematopoietic stem cell | 7.55e-10 | 32 |
hematopoietic multipotent progenitor cell | 7.55e-10 | 32 |
connective tissue cell | 8.52e-07 | 46 |
mesenchymal cell | 8.52e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.19e-14 | 48 |
immune system | 2.19e-14 | 48 |
bone marrow | 6.38e-14 | 16 |
spleen | 1.66e-13 | 6 |
cavity lining | 1.66e-13 | 6 |
serous membrane | 1.66e-13 | 6 |
gastrointestinal system mesentery | 1.66e-13 | 6 |
stomach region | 1.66e-13 | 6 |
mesentery | 1.66e-13 | 6 |
gastrointestinal system serosa | 1.66e-13 | 6 |
mesentery of stomach | 1.66e-13 | 6 |
gut mesentery | 1.66e-13 | 6 |
dorsal mesentery | 1.66e-13 | 6 |
dorsal mesogastrium | 1.66e-13 | 6 |
peritoneal cavity | 1.66e-13 | 6 |
spleen primordium | 1.66e-13 | 6 |
hematopoietic system | 4.66e-12 | 45 |
blood island | 4.66e-12 | 45 |
lymph node | 1.63e-10 | 1 |
axillary lymph node | 1.63e-10 | 1 |
peripheral lymph node | 1.63e-10 | 1 |
shoulder | 1.63e-10 | 1 |
bone element | 3.73e-10 | 22 |
skeletal element | 3.73e-10 | 22 |
skeletal system | 3.73e-10 | 22 |
intraembryonic coelom | 2.36e-08 | 10 |
musculoskeletal system | 5.41e-07 | 32 |
connective tissue | 8.52e-07 | 46 |