FFCP PHASE1:Mm9::chr4:44717308..44717321,-: Difference between revisions
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{{FFCP|EntrezGene=18507|HGNC=|UniProt=|association_with_transcript=-430bp_to_ENSMUST00000146335_5end|description=CAGE_peak_6_at_Pax5_5end|id=chr4:44717308..44717321,-|ontology_enrichment_celltype=CL:0000117!1.65e-07!23;CL:0000337!1.65e-07!23|ontology_enrichment_celltype_v019_2=CL:0000553,3.36e-22,6;CL:0000556,3.36e-22,6;CL:0000120,8.31e-17,3;CL:0000050,8.74e-15,9;CL:0000839,3.35e-10,13;CL:0000763,2.93e-08,16;CL:0002027,1.51e-07,3;CL:0002006,1.51e-07,3;CL:0002024,1.51e-07,3;CL:0002031,2.45e-07,25;CL:0000049,6.29e-07,19;CL:0000945,8.36e-07,1;CL:0000236,8.36e-07,1;CL:0000826,8.36e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002298!6.03e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.06e-08,6;UBERON:0004457,2.06e-08,6;UBERON:0000042,2.06e-08,6;UBERON:0004854,2.06e-08,6;UBERON:0009034,2.06e-08,6;UBERON:0002095,2.06e-08,6;UBERON:0004782,2.06e-08,6;UBERON:0003281,2.06e-08,6;UBERON:0009664,2.06e-08,6;UBERON:0002296,2.06e-08,6;UBERON:0005602,2.06e-08,6;UBERON:0001179,2.06e-08,6;UBERON:0006293,2.06e-08,6;UBERON:0001474,2.79e-08,22;UBERON:0004765,2.79e-08,22;UBERON:0001434,2.79e-08,22;UBERON:0002371,2.93e-08,16;UBERON:0002193,8.68e-08,48;UBERON:0002405,8.68e-08,48|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66554880907831,1.82227740650843,0,12.4607555316504,9.46089591879598,7.63901373236454,0,0.496454756004426,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.21465206048266,0,0,0,0,0,5.66486090406874,4.7609188134483,6.33831403506179,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0.122490799214954,0,0,0,0.893811366596314,1.38245879930619,0.263772575460388,0.0914876436024097,0,1.95428099300967,0.56276261003168,0.916789486660861,0,0.142371680799103,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,2.33044095282455,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0.662524555381181,1.93950101254089,0,0,0,0.255457055208591,0,0,0,0.599162557619291,0,0,0,0,0.62336413367868,0.162241263067758,0,0.995255764880744,0,0,0,0.229902104433473,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0.405720242777006,0.964708639009667,0.25462585178142,0,0,0.549122826376163,0,0.372140947668503,0,0.252578877947112,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0.221464689648775,0,0.491589944147214,0.345369963731791,0.144649058581512,0,0,0,0.275936746304732,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05045056957423,0.206386867963223,0,0.565105371014073,3.2806614653046,3.66045077130436,0,0.279902904647316,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.726511433089237,1.19707462020309,0,0.486213434136588,0,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0,0,0,0.17230640686684,0.476293691283074,0,0,0,0,0,0,0,0.145346416632329,0,0.169229215783353,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0,0.409231043169689,0,0,0.249810577937946,0,0,0,0.220591419119515,0.695603506861264|short_description=p6@Pax5}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18507 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-430bp_to_ENSMUST00000146335_5end | |||
|cluster_id=chr4:44717308..44717321,- | |||
|description=CAGE_peak_6_at_Pax5_5end | |||
|id=chr4:44717308..44717321,- | |||
|ontology_enrichment_celltype=CL:0000117!1.65e-07!23;CL:0000337!1.65e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,3.36e-22,6;CL:0000556,3.36e-22,6;CL:0000120,8.31e-17,3;CL:0000050,8.74e-15,9;CL:0000839,3.35e-10,13;CL:0000763,2.93e-08,16;CL:0002027,1.51e-07,3;CL:0002006,1.51e-07,3;CL:0002024,1.51e-07,3;CL:0002031,2.45e-07,25;CL:0000049,6.29e-07,19;CL:0000945,8.36e-07,1;CL:0000236,8.36e-07,1;CL:0000826,8.36e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002298!6.03e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.06e-08,6;UBERON:0004457,2.06e-08,6;UBERON:0000042,2.06e-08,6;UBERON:0004854,2.06e-08,6;UBERON:0009034,2.06e-08,6;UBERON:0002095,2.06e-08,6;UBERON:0004782,2.06e-08,6;UBERON:0003281,2.06e-08,6;UBERON:0009664,2.06e-08,6;UBERON:0002296,2.06e-08,6;UBERON:0005602,2.06e-08,6;UBERON:0001179,2.06e-08,6;UBERON:0006293,2.06e-08,6;UBERON:0001474,2.79e-08,22;UBERON:0004765,2.79e-08,22;UBERON:0001434,2.79e-08,22;UBERON:0002371,2.93e-08,16;UBERON:0002193,8.68e-08,48;UBERON:0002405,8.68e-08,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66554880907831,1.82227740650843,0,12.4607555316504,9.46089591879598,7.63901373236454,0,0.496454756004426,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.21465206048266,0,0,0,0,0,5.66486090406874,4.7609188134483,6.33831403506179,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0.122490799214954,0,0,0,0.893811366596314,1.38245879930619,0.263772575460388,0.0914876436024097,0,1.95428099300967,0.56276261003168,0.916789486660861,0,0.142371680799103,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,2.33044095282455,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0.662524555381181,1.93950101254089,0,0,0,0.255457055208591,0,0,0,0.599162557619291,0,0,0,0,0.62336413367868,0.162241263067758,0,0.995255764880744,0,0,0,0.229902104433473,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0.405720242777006,0.964708639009667,0.25462585178142,0,0,0.549122826376163,0,0.372140947668503,0,0.252578877947112,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0.221464689648775,0,0.491589944147214,0.345369963731791,0.144649058581512,0,0,0,0.275936746304732,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05045056957423,0.206386867963223,0,0.565105371014073,3.2806614653046,3.66045077130436,0,0.279902904647316,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.726511433089237,1.19707462020309,0,0.486213434136588,0,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0,0,0,0.17230640686684,0.476293691283074,0,0,0,0,0,0,0,0.145346416632329,0,0.169229215783353,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0,0.409231043169689,0,0,0.249810577937946,0,0,0,0.220591419119515,0.695603506861264 | |||
|short_description=p6@Pax5 | |||
}} |
Revision as of 12:27, 5 August 2015
Short description: | p6@Pax5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Pax5_5end |
Coexpression cluster: | NA |
Association with transcript: | -430bp_to_ENSMUST00000146335_5end |
EntrezGene: | 18507 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 3.36e-22 | 6 |
megakaryocyte | 3.36e-22 | 6 |
granule cell | 8.31e-17 | 3 |
megakaryocyte-erythroid progenitor cell | 8.74e-15 | 9 |
myeloid lineage restricted progenitor cell | 3.35e-10 | 13 |
myeloid cell | 2.93e-08 | 16 |
CD9-positive, CD41-positive megakaryocyte cell | 1.51e-07 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.51e-07 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.51e-07 | 3 |
hematopoietic lineage restricted progenitor cell | 2.45e-07 | 25 |
common myeloid progenitor | 6.29e-07 | 19 |
lymphocyte of B lineage | 8.36e-07 | 1 |
B cell | 8.36e-07 | 1 |
pro-B cell | 8.36e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.06e-08 | 6 |
cavity lining | 2.06e-08 | 6 |
serous membrane | 2.06e-08 | 6 |
gastrointestinal system mesentery | 2.06e-08 | 6 |
stomach region | 2.06e-08 | 6 |
mesentery | 2.06e-08 | 6 |
gastrointestinal system serosa | 2.06e-08 | 6 |
mesentery of stomach | 2.06e-08 | 6 |
gut mesentery | 2.06e-08 | 6 |
dorsal mesentery | 2.06e-08 | 6 |
dorsal mesogastrium | 2.06e-08 | 6 |
peritoneal cavity | 2.06e-08 | 6 |
spleen primordium | 2.06e-08 | 6 |
bone element | 2.79e-08 | 22 |
skeletal element | 2.79e-08 | 22 |
skeletal system | 2.79e-08 | 22 |
bone marrow | 2.93e-08 | 16 |
hemolymphoid system | 8.68e-08 | 48 |
immune system | 8.68e-08 | 48 |