FFCP PHASE1:Mm9::chr15:74762540..74762587,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=18|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:74762540..74762587,+|id=chr15:74762540..74762587,+|ontology_enrichment_celltype=CL:0000553!4.11e-09!6;CL:0000556!4.11e-09!6|ontology_enrichment_celltype_v019_2=CL:0000553,8.00e-27,6;CL:0000556,8.00e-27,6;CL:0000050,4.70e-18,9;CL:0000763,1.40e-15,16;CL:0000049,3.75e-13,19;CL:0000839,1.24e-12,13;CL:0000945,3.65e-11,1;CL:0000236,3.65e-11,1;CL:0000826,3.65e-11,1;CL:0000988,4.35e-11,32;CL:0002032,4.35e-11,32;CL:0000037,4.35e-11,32;CL:0000837,4.35e-11,32;CL:0002031,4.32e-10,25;CL:0002320,1.09e-07,46;CL:0000134,1.09e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!6.49e-24!48;UBERON:0002390!1.21e-23!45;UBERON:0003061!1.21e-23!45;UBERON:0004177!9.33e-22!29;UBERON:0002405!7.97e-17!70;UBERON:0002370!3.38e-15!23;UBERON:0000974!3.38e-15!23;UBERON:0004807!3.38e-15!23;UBERON:0005058!3.38e-15!23;UBERON:0003351!3.38e-15!23;UBERON:0009113!3.38e-15!23;UBERON:0003295!3.38e-15!23;UBERON:0009722!3.38e-15!23;UBERON:0005562!3.38e-15!23;UBERON:0007690!3.38e-15!23;UBERON:0003081!6.03e-15!88;UBERON:0000072!2.07e-14!27;UBERON:0006562!2.08e-14!24;UBERON:0003408!2.08e-14!24;UBERON:0001557!2.08e-14!24;UBERON:0001042!2.08e-14!24;UBERON:0008814!2.08e-14!24;UBERON:0009145!2.08e-14!24;UBERON:0000065!1.66e-13!41;UBERON:0001004!4.59e-13!42;UBERON:0005057!1.02e-12!51;UBERON:0000063!3.30e-10!35;UBERON:0003887!1.59e-08!10;UBERON:0001041!2.06e-08!92;UBERON:0002106!4.07e-08!6;UBERON:0004457!4.07e-08!6;UBERON:0000042!4.07e-08!6;UBERON:0004854!4.07e-08!6;UBERON:0009034!4.07e-08!6;UBERON:0002095!4.07e-08!6;UBERON:0004782!4.07e-08!6;UBERON:0003281!4.07e-08!6;UBERON:0009664!4.07e-08!6;UBERON:0002296!4.07e-08!6;UBERON:0005602!4.07e-08!6;UBERON:0001179!4.07e-08!6;UBERON:0006293!4.07e-08!6;UBERON:0000077!1.19e-07!97;UBERON:0000926!1.93e-07!193;UBERON:0004120!1.93e-07!193;UBERON:0006603!1.93e-07!193;UBERON:0001048!2.01e-07!147;UBERON:0005911!7.73e-07!69;UBERON:0002530!8.82e-07!65|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.40e-15,16;UBERON:0002193,9.13e-13,48;UBERON:0002405,9.13e-13,48;UBERON:0001474,2.21e-11,22;UBERON:0004765,2.21e-11,22;UBERON:0001434,2.21e-11,22;UBERON:0000029,4.58e-11,1;UBERON:0001097,4.58e-11,1;UBERON:0003968,4.58e-11,1;UBERON:0001467,4.58e-11,1;UBERON:0002390,1.85e-10,45;UBERON:0003061,1.85e-10,45;UBERON:0002204,7.36e-08,32;UBERON:0002384,1.09e-07,46|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,1.66554880907831,0.202475267389826,0,5.20512572841092,6.30726394586398,5.94145512517242,0,0.0992909512008853,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,2.68452169692378,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505524445014783,0,2.07150306917737,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0.206386867963223,0,0.376736914009382,0.820165366326151,0.686334519619568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0.202725215290164,0.102710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0.240390899039938,0.147689527174577,0.504832249740738,0.304827226619999,1.20991422164209,0.974578807397524,0.481059208201647,1.28564592399726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr15:74762540..74762587,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:74762540..74762587,+ | |||
|description=CAGE_peak_at_chr15:74762540..74762587,+ | |||
|id=chr15:74762540..74762587,+ | |||
|ontology_enrichment_celltype=CL:0000553!4.11e-09!6;CL:0000556!4.11e-09!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,8.00e-27,6;CL:0000556,8.00e-27,6;CL:0000050,4.70e-18,9;CL:0000763,1.40e-15,16;CL:0000049,3.75e-13,19;CL:0000839,1.24e-12,13;CL:0000945,3.65e-11,1;CL:0000236,3.65e-11,1;CL:0000826,3.65e-11,1;CL:0000988,4.35e-11,32;CL:0002032,4.35e-11,32;CL:0000037,4.35e-11,32;CL:0000837,4.35e-11,32;CL:0002031,4.32e-10,25;CL:0002320,1.09e-07,46;CL:0000134,1.09e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.49e-24!48;UBERON:0002390!1.21e-23!45;UBERON:0003061!1.21e-23!45;UBERON:0004177!9.33e-22!29;UBERON:0002405!7.97e-17!70;UBERON:0002370!3.38e-15!23;UBERON:0000974!3.38e-15!23;UBERON:0004807!3.38e-15!23;UBERON:0005058!3.38e-15!23;UBERON:0003351!3.38e-15!23;UBERON:0009113!3.38e-15!23;UBERON:0003295!3.38e-15!23;UBERON:0009722!3.38e-15!23;UBERON:0005562!3.38e-15!23;UBERON:0007690!3.38e-15!23;UBERON:0003081!6.03e-15!88;UBERON:0000072!2.07e-14!27;UBERON:0006562!2.08e-14!24;UBERON:0003408!2.08e-14!24;UBERON:0001557!2.08e-14!24;UBERON:0001042!2.08e-14!24;UBERON:0008814!2.08e-14!24;UBERON:0009145!2.08e-14!24;UBERON:0000065!1.66e-13!41;UBERON:0001004!4.59e-13!42;UBERON:0005057!1.02e-12!51;UBERON:0000063!3.30e-10!35;UBERON:0003887!1.59e-08!10;UBERON:0001041!2.06e-08!92;UBERON:0002106!4.07e-08!6;UBERON:0004457!4.07e-08!6;UBERON:0000042!4.07e-08!6;UBERON:0004854!4.07e-08!6;UBERON:0009034!4.07e-08!6;UBERON:0002095!4.07e-08!6;UBERON:0004782!4.07e-08!6;UBERON:0003281!4.07e-08!6;UBERON:0009664!4.07e-08!6;UBERON:0002296!4.07e-08!6;UBERON:0005602!4.07e-08!6;UBERON:0001179!4.07e-08!6;UBERON:0006293!4.07e-08!6;UBERON:0000077!1.19e-07!97;UBERON:0000926!1.93e-07!193;UBERON:0004120!1.93e-07!193;UBERON:0006603!1.93e-07!193;UBERON:0001048!2.01e-07!147;UBERON:0005911!7.73e-07!69;UBERON:0002530!8.82e-07!65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.40e-15,16;UBERON:0002193,9.13e-13,48;UBERON:0002405,9.13e-13,48;UBERON:0001474,2.21e-11,22;UBERON:0004765,2.21e-11,22;UBERON:0001434,2.21e-11,22;UBERON:0000029,4.58e-11,1;UBERON:0001097,4.58e-11,1;UBERON:0003968,4.58e-11,1;UBERON:0001467,4.58e-11,1;UBERON:0002390,1.85e-10,45;UBERON:0003061,1.85e-10,45;UBERON:0002204,7.36e-08,32;UBERON:0002384,1.09e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,1.66554880907831,0.202475267389826,0,5.20512572841092,6.30726394586398,5.94145512517242,0,0.0992909512008853,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,2.68452169692378,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505524445014783,0,2.07150306917737,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0.206386867963223,0,0.376736914009382,0.820165366326151,0.686334519619568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0.202725215290164,0.102710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0.240390899039938,0.147689527174577,0.504832249740738,0.304827226619999,1.20991422164209,0.974578807397524,0.481059208201647,1.28564592399726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:74762540..74762587,+ | |||
}} |
Latest revision as of 11:19, 5 August 2015
Short description: | p@chr15:74762540..74762587, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:74762540..74762587, + |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 8.00e-27 | 6 |
megakaryocyte | 8.00e-27 | 6 |
megakaryocyte-erythroid progenitor cell | 4.70e-18 | 9 |
myeloid cell | 1.40e-15 | 16 |
common myeloid progenitor | 3.75e-13 | 19 |
myeloid lineage restricted progenitor cell | 1.24e-12 | 13 |
lymphocyte of B lineage | 3.65e-11 | 1 |
B cell | 3.65e-11 | 1 |
pro-B cell | 3.65e-11 | 1 |
hematopoietic cell | 4.35e-11 | 32 |
hematopoietic oligopotent progenitor cell | 4.35e-11 | 32 |
hematopoietic stem cell | 4.35e-11 | 32 |
hematopoietic multipotent progenitor cell | 4.35e-11 | 32 |
hematopoietic lineage restricted progenitor cell | 4.32e-10 | 25 |
connective tissue cell | 1.09e-07 | 46 |
mesenchymal cell | 1.09e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.40e-15 | 16 |
hemolymphoid system | 9.13e-13 | 48 |
immune system | 9.13e-13 | 48 |
bone element | 2.21e-11 | 22 |
skeletal element | 2.21e-11 | 22 |
skeletal system | 2.21e-11 | 22 |
lymph node | 4.58e-11 | 1 |
axillary lymph node | 4.58e-11 | 1 |
peripheral lymph node | 4.58e-11 | 1 |
shoulder | 4.58e-11 | 1 |
hematopoietic system | 1.85e-10 | 45 |
blood island | 1.85e-10 | 45 |
musculoskeletal system | 7.36e-08 | 32 |
connective tissue | 1.09e-07 | 46 |