FFCP PHASE1:Mm9::chr11:115669382..115669420,-: Difference between revisions
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{{FFCP|EntrezGene=140721|HGNC=|UniProt=F6R2B3|association_with_transcript=0bp_to_ENSMUST00000132780_5end|description=CAGE_peak_5_at_Caskin2_5end|id=chr11:115669382..115669420,-|ontology_enrichment_celltype=CL:0000540!2.61e-17!33;CL:0000047!2.61e-17!33;CL:0000031!2.61e-17!33;CL:0000404!2.61e-17!33;CL:0000221!5.20e-17!44;CL:0000133!5.20e-17!44;CL:0002319!3.47e-16!43;CL:0000393!1.65e-12!39;CL:0000211!1.65e-12!39;CL:0000055!9.55e-12!50;CL:0000117!1.85e-11!23;CL:0000337!1.85e-11!23|ontology_enrichment_celltype_v019_2=CL:0000221,6.61e-20,44;CL:0000133,6.61e-20,44;CL:0002319,3.01e-18,43;CL:0000540,1.29e-17,33;CL:0000047,1.29e-17,33;CL:0000031,1.29e-17,33;CL:0000404,1.29e-17,33;CL:0000393,3.16e-14,39;CL:0000211,3.16e-14,39;CL:0000117,1.66e-11,23;CL:0000337,1.66e-11,23;CL:0002321,1.70e-10,70;CL:0002608,9.93e-08,3;CL:0002612,3.50e-07,3;CL:0000120,7.98e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!4.76e-28!102;UBERON:0000924!4.76e-28!102;UBERON:0006601!4.76e-28!102;UBERON:0001017!5.56e-25!73;UBERON:0005743!5.56e-25!73;UBERON:0000073!9.19e-25!75;UBERON:0001016!9.19e-25!75;UBERON:0002346!5.35e-22!71;UBERON:0003075!5.35e-22!71;UBERON:0007284!5.35e-22!71;UBERON:0000033!1.45e-18!63;UBERON:0001049!1.33e-17!52;UBERON:0005068!1.33e-17!52;UBERON:0006241!1.33e-17!52;UBERON:0007135!1.33e-17!52;UBERON:0003056!1.93e-16!49;UBERON:0002020!3.95e-16!34;UBERON:0000955!3.93e-14!50;UBERON:0006238!3.93e-14!50;UBERON:0003080!1.37e-13!40;UBERON:0002616!1.99e-13!49;UBERON:0002780!2.16e-13!39;UBERON:0001890!2.16e-13!39;UBERON:0006240!2.16e-13!39;UBERON:0002791!2.06e-12!29;UBERON:0003528!2.06e-12!29;UBERON:0001893!2.06e-12!29;UBERON:0007811!6.31e-11!86;UBERON:0000956!1.63e-09!21;UBERON:0001869!1.63e-09!21;UBERON:0000203!1.63e-09!21;UBERON:0000153!2.18e-08!94;UBERON:0002619!7.56e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.33e-24,95;UBERON:0000924,1.33e-24,95;UBERON:0006601,1.33e-24,95;UBERON:0001017,9.37e-21,73;UBERON:0001016,5.20e-20,75;UBERON:0010371,2.95e-19,73;UBERON:0002346,4.23e-19,64;UBERON:0003075,4.23e-19,64;UBERON:0007284,4.23e-19,64;UBERON:0010314,3.00e-16,92;UBERON:0002240,1.07e-13,6;UBERON:0005174,1.07e-13,6;UBERON:0001137,1.07e-13,6;UBERON:0002020,2.26e-13,34;UBERON:0001049,1.56e-12,52;UBERON:0005068,1.56e-12,52;UBERON:0006241,1.56e-12,52;UBERON:0007135,1.56e-12,52;UBERON:0001954,6.91e-12,7;UBERON:0003022,6.91e-12,7;UBERON:0002421,6.91e-12,7;UBERON:0000349,6.91e-12,7;UBERON:0002600,6.91e-12,7;UBERON:0001948,1.16e-11,5;UBERON:0002315,1.16e-11,5;UBERON:0003076,5.22e-11,12;UBERON:0003057,5.22e-11,12;UBERON:0000020,1.23e-10,12;UBERON:0001032,1.23e-10,12;UBERON:0004456,1.23e-10,12;UBERON:0000073,1.79e-10,54;UBERON:0000033,1.04e-09,13;UBERON:0003056,4.65e-09,49;UBERON:0005085,1.22e-07,13;UBERON:0002619,2.25e-07,17;UBERON:0000955,3.20e-07,47;UBERON:0006238,3.20e-07,47;UBERON:0002257,3.50e-07,3;UBERON:0000956,3.63e-07,21;UBERON:0001869,3.63e-07,21;UBERON:0000203,3.63e-07,21;UBERON:0003528,4.42e-07,29;UBERON:0002791,4.42e-07,29;UBERON:0001893,4.42e-07,29|phase1_expression=2.5623815536767,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8343270329458,3.95435128922049,4.86074747685709,0.419959264876088,0,0,0,0,0,0,0,1.41621522601718,2.11596391708813,1.26766280701236,0.338844532069132,0,0,0,0,0,0,0.622137673850866,0.405017814995072,0.630974884054146,3.71346279724945,5.74258206474195,2.32732518508413,2.20444583341944,4.5960939330501,0,0.766124028511126,0.307213066512487,0.923204014111357,0.914876436024097,1.04182674111352,0.837548997004143,0,0.61119299110724,2.06240009831567,2.84743361598206,1.3047961207771,0.605809546665472,0,0,0,0,0,0,0,0.421333260395256,0,0,0,10.2815696436977,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0.304465478312141,0,0.150722640552623,0.23517741427141,0.251333182659351,0,0.289198713839823,0,0.485300549842228,0.883366073841574,0,0,0,0,0,0,0,0,0.299581278809645,2.28750301409313,0.753926112677186,1.56441888173049,1.02286182932132,1.45451631191692,0.811206315338788,0,0,0,1.26265113531884,0,0,0.900310649026746,0.452114453507145,2.10913147369116,1.40925092313335,1.78033276663485,5.43277078551933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0.16455984991348,0.164167464079095,0.486412857275134,1.16959989940266,0,0.671032093801859,1.89260953707715,0.411618449517138,0,0,0,0.232236671860439,0.128867461322093,0,0.22237804384487,0.190225626112559,0.474529061544512,0,0.502670417600539,0.397912944082302,0.38992817423824,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0,0.345369963731791,0.144649058581512,0,0,0,0,0.642202359951168,1.05490517932983,0,1.76729649043061,0.94652465824877,1.17131623288992,1.93881057959519,0.238968797952552,0.668396022247182,1.13230612315533,0.809621403349789,2.33804686329049,3.55759000151871,2.89189184779626,0,0,0,0,0,0.242780636154981,0.604647113929502,0,0.295301892880773,0,0.258428293168221,0,0.712994756769443,0,0,0,0,0,0.517434735131018,0.428674070063185,0,0.535106452806212,0.822745103010605,0.913394847343798,0,0,0,0.32977250588296,0.161464426695906,0.120625849856312,0.358117032009409,0.328281799490123,0,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.432021363287205,0,0.218362563746178,0.809186078308924,0.495920734352016,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0.358053391334963,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0,0,0,1.13365191807606,0,0,0,0.19318959403219,0,0,0,0,0.564751842617067,1.38097570952153,0,0.859265911718438,1.37016503954128,0.755393897389701,0.675022500231806,0,0.453142408984205,0.51776031175182,0,0,0.512200817262403,0.486213434136588,0.209613162627982,0,0.222246727801615,0,0.64183841918363,0,0.25347929989024,0.565879024158229,0.37456602987953,0.384150914429216,0.17230640686684,0,0.231768651889711,0,0.824171801606613,0.441596760403192,0,0,0.238436189947321,0.145346416632329,0,0.423073039458382,0.182927972872773,0.526139422875686,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0.385813221962283,0.749431733813838,0.467863216890817,0,0.765153328275374,2.64709702943419,3.47801753430632|short_description=p5@Caskin2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:140721 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F6R2B3 | |||
|association_with_transcript=0bp_to_ENSMUST00000132780_5end | |||
|cluster_id=chr11:115669382..115669420,- | |||
|description=CAGE_peak_5_at_Caskin2_5end | |||
|id=chr11:115669382..115669420,- | |||
|ontology_enrichment_celltype=CL:0000540!2.61e-17!33;CL:0000047!2.61e-17!33;CL:0000031!2.61e-17!33;CL:0000404!2.61e-17!33;CL:0000221!5.20e-17!44;CL:0000133!5.20e-17!44;CL:0002319!3.47e-16!43;CL:0000393!1.65e-12!39;CL:0000211!1.65e-12!39;CL:0000055!9.55e-12!50;CL:0000117!1.85e-11!23;CL:0000337!1.85e-11!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,6.61e-20,44;CL:0000133,6.61e-20,44;CL:0002319,3.01e-18,43;CL:0000540,1.29e-17,33;CL:0000047,1.29e-17,33;CL:0000031,1.29e-17,33;CL:0000404,1.29e-17,33;CL:0000393,3.16e-14,39;CL:0000211,3.16e-14,39;CL:0000117,1.66e-11,23;CL:0000337,1.66e-11,23;CL:0002321,1.70e-10,70;CL:0002608,9.93e-08,3;CL:0002612,3.50e-07,3;CL:0000120,7.98e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.76e-28!102;UBERON:0000924!4.76e-28!102;UBERON:0006601!4.76e-28!102;UBERON:0001017!5.56e-25!73;UBERON:0005743!5.56e-25!73;UBERON:0000073!9.19e-25!75;UBERON:0001016!9.19e-25!75;UBERON:0002346!5.35e-22!71;UBERON:0003075!5.35e-22!71;UBERON:0007284!5.35e-22!71;UBERON:0000033!1.45e-18!63;UBERON:0001049!1.33e-17!52;UBERON:0005068!1.33e-17!52;UBERON:0006241!1.33e-17!52;UBERON:0007135!1.33e-17!52;UBERON:0003056!1.93e-16!49;UBERON:0002020!3.95e-16!34;UBERON:0000955!3.93e-14!50;UBERON:0006238!3.93e-14!50;UBERON:0003080!1.37e-13!40;UBERON:0002616!1.99e-13!49;UBERON:0002780!2.16e-13!39;UBERON:0001890!2.16e-13!39;UBERON:0006240!2.16e-13!39;UBERON:0002791!2.06e-12!29;UBERON:0003528!2.06e-12!29;UBERON:0001893!2.06e-12!29;UBERON:0007811!6.31e-11!86;UBERON:0000956!1.63e-09!21;UBERON:0001869!1.63e-09!21;UBERON:0000203!1.63e-09!21;UBERON:0000153!2.18e-08!94;UBERON:0002619!7.56e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.33e-24,95;UBERON:0000924,1.33e-24,95;UBERON:0006601,1.33e-24,95;UBERON:0001017,9.37e-21,73;UBERON:0001016,5.20e-20,75;UBERON:0010371,2.95e-19,73;UBERON:0002346,4.23e-19,64;UBERON:0003075,4.23e-19,64;UBERON:0007284,4.23e-19,64;UBERON:0010314,3.00e-16,92;UBERON:0002240,1.07e-13,6;UBERON:0005174,1.07e-13,6;UBERON:0001137,1.07e-13,6;UBERON:0002020,2.26e-13,34;UBERON:0001049,1.56e-12,52;UBERON:0005068,1.56e-12,52;UBERON:0006241,1.56e-12,52;UBERON:0007135,1.56e-12,52;UBERON:0001954,6.91e-12,7;UBERON:0003022,6.91e-12,7;UBERON:0002421,6.91e-12,7;UBERON:0000349,6.91e-12,7;UBERON:0002600,6.91e-12,7;UBERON:0001948,1.16e-11,5;UBERON:0002315,1.16e-11,5;UBERON:0003076,5.22e-11,12;UBERON:0003057,5.22e-11,12;UBERON:0000020,1.23e-10,12;UBERON:0001032,1.23e-10,12;UBERON:0004456,1.23e-10,12;UBERON:0000073,1.79e-10,54;UBERON:0000033,1.04e-09,13;UBERON:0003056,4.65e-09,49;UBERON:0005085,1.22e-07,13;UBERON:0002619,2.25e-07,17;UBERON:0000955,3.20e-07,47;UBERON:0006238,3.20e-07,47;UBERON:0002257,3.50e-07,3;UBERON:0000956,3.63e-07,21;UBERON:0001869,3.63e-07,21;UBERON:0000203,3.63e-07,21;UBERON:0003528,4.42e-07,29;UBERON:0002791,4.42e-07,29;UBERON:0001893,4.42e-07,29 | |||
|phase1_expression=2.5623815536767,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8343270329458,3.95435128922049,4.86074747685709,0.419959264876088,0,0,0,0,0,0,0,1.41621522601718,2.11596391708813,1.26766280701236,0.338844532069132,0,0,0,0,0,0,0.622137673850866,0.405017814995072,0.630974884054146,3.71346279724945,5.74258206474195,2.32732518508413,2.20444583341944,4.5960939330501,0,0.766124028511126,0.307213066512487,0.923204014111357,0.914876436024097,1.04182674111352,0.837548997004143,0,0.61119299110724,2.06240009831567,2.84743361598206,1.3047961207771,0.605809546665472,0,0,0,0,0,0,0,0.421333260395256,0,0,0,10.2815696436977,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0.304465478312141,0,0.150722640552623,0.23517741427141,0.251333182659351,0,0.289198713839823,0,0.485300549842228,0.883366073841574,0,0,0,0,0,0,0,0,0.299581278809645,2.28750301409313,0.753926112677186,1.56441888173049,1.02286182932132,1.45451631191692,0.811206315338788,0,0,0,1.26265113531884,0,0,0.900310649026746,0.452114453507145,2.10913147369116,1.40925092313335,1.78033276663485,5.43277078551933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0.16455984991348,0.164167464079095,0.486412857275134,1.16959989940266,0,0.671032093801859,1.89260953707715,0.411618449517138,0,0,0,0.232236671860439,0.128867461322093,0,0.22237804384487,0.190225626112559,0.474529061544512,0,0.502670417600539,0.397912944082302,0.38992817423824,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0,0.345369963731791,0.144649058581512,0,0,0,0,0.642202359951168,1.05490517932983,0,1.76729649043061,0.94652465824877,1.17131623288992,1.93881057959519,0.238968797952552,0.668396022247182,1.13230612315533,0.809621403349789,2.33804686329049,3.55759000151871,2.89189184779626,0,0,0,0,0,0.242780636154981,0.604647113929502,0,0.295301892880773,0,0.258428293168221,0,0.712994756769443,0,0,0,0,0,0.517434735131018,0.428674070063185,0,0.535106452806212,0.822745103010605,0.913394847343798,0,0,0,0.32977250588296,0.161464426695906,0.120625849856312,0.358117032009409,0.328281799490123,0,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.432021363287205,0,0.218362563746178,0.809186078308924,0.495920734352016,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0.358053391334963,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0,0,0,1.13365191807606,0,0,0,0.19318959403219,0,0,0,0,0.564751842617067,1.38097570952153,0,0.859265911718438,1.37016503954128,0.755393897389701,0.675022500231806,0,0.453142408984205,0.51776031175182,0,0,0.512200817262403,0.486213434136588,0.209613162627982,0,0.222246727801615,0,0.64183841918363,0,0.25347929989024,0.565879024158229,0.37456602987953,0.384150914429216,0.17230640686684,0,0.231768651889711,0,0.824171801606613,0.441596760403192,0,0,0.238436189947321,0.145346416632329,0,0.423073039458382,0.182927972872773,0.526139422875686,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0.385813221962283,0.749431733813838,0.467863216890817,0,0.765153328275374,2.64709702943419,3.47801753430632 | |||
|short_description=p5@Caskin2 | |||
}} |
Revision as of 11:10, 5 August 2015
Short description: | p5@Caskin2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Caskin2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000132780_5end |
EntrezGene: | 140721 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 6.61e-20 | 44 |
neurectodermal cell | 6.61e-20 | 44 |
neural cell | 3.01e-18 | 43 |
neuron | 1.29e-17 | 33 |
neuronal stem cell | 1.29e-17 | 33 |
neuroblast | 1.29e-17 | 33 |
electrically signaling cell | 1.29e-17 | 33 |
electrically responsive cell | 3.16e-14 | 39 |
electrically active cell | 3.16e-14 | 39 |
CNS neuron (sensu Vertebrata) | 1.66e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.66e-11 | 23 |
embryonic cell | 1.70e-10 | 70 |
hippocampal neuron | 9.93e-08 | 3 |
neuron of the ventral spinal cord | 3.50e-07 | 3 |
granule cell | 7.98e-07 | 3 |