FFCP PHASE1:Mm9::chr7:6120193..6120204,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=58|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:6120193..6120204,-|id=chr7:6120193..6120204,-|ontology_enrichment_celltype=CL:0000473!2.20e-14!3;CL:0000627!2.20e-14!3;CL:0000682!2.20e-14!3;CL:0000239!2.60e-12!6;CL:0000677!2.60e-12!6;CL:0000212!2.60e-12!6;CL:0000584!2.60e-12!6;CL:0000075!1.43e-10!7;CL:0002563!3.06e-08!9;CL:0002251!3.06e-08!9;CL:0000066!3.85e-08!25|ontology_enrichment_celltype_v019_2=CL:0000682,1.31e-33,3;CL:0000239,2.40e-29,6;CL:0000677,2.40e-29,6;CL:0000584,2.40e-29,6;CL:0000075,3.04e-25,7;CL:0000066,1.94e-21,25;CL:0002563,9.18e-20,9;CL:0002251,9.18e-20,9;CL:0000473,7.21e-15,7;CL:0002076,4.68e-12,15;CL:0000223,3.81e-09,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!6.40e-18!15;UBERON:0001242!7.59e-12!13;UBERON:0000060!7.59e-12!13;UBERON:0001262!7.59e-12!13;UBERON:0004786!7.59e-12!13;UBERON:0004923!8.49e-11!24;UBERON:0001962!7.45e-10!2;UBERON:0001961!7.45e-10!2;UBERON:0001744!7.45e-10!2;UBERON:0003350!3.06e-08!9;UBERON:0004808!3.06e-08!9;UBERON:0001277!3.06e-08!9;UBERON:0002465!7.77e-07!3;UBERON:0000485!9.44e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0003350,9.18e-20,9;UBERON:0004808,9.18e-20,9;UBERON:0001277,9.18e-20,9;UBERON:0000344,2.27e-18,15;UBERON:0000485,2.88e-16,11;UBERON:0001242,7.69e-14,13;UBERON:0001262,7.69e-14,13;UBERON:0004786,7.69e-14,13;UBERON:0004923,1.38e-11,24;UBERON:0001962,9.80e-07,2;UBERON:0001961,9.80e-07,2;UBERON:0001744,9.80e-07,2|phase1_expression=0,1.74487703819681,3.63999391511629,0,0,2.35030980676646,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75991665072747,0.91763712426868,1.72269589234506,2.58457197695445,5.60225204983311,0.190023419456374,0,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0.15241361331,0,0,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr7:6120193..6120204,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:6120193..6120204,- | |||
|description=CAGE_peak_at_chr7:6120193..6120204,- | |||
|id=chr7:6120193..6120204,- | |||
|ontology_enrichment_celltype=CL:0000473!2.20e-14!3;CL:0000627!2.20e-14!3;CL:0000682!2.20e-14!3;CL:0000239!2.60e-12!6;CL:0000677!2.60e-12!6;CL:0000212!2.60e-12!6;CL:0000584!2.60e-12!6;CL:0000075!1.43e-10!7;CL:0002563!3.06e-08!9;CL:0002251!3.06e-08!9;CL:0000066!3.85e-08!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.31e-33,3;CL:0000239,2.40e-29,6;CL:0000677,2.40e-29,6;CL:0000584,2.40e-29,6;CL:0000075,3.04e-25,7;CL:0000066,1.94e-21,25;CL:0002563,9.18e-20,9;CL:0002251,9.18e-20,9;CL:0000473,7.21e-15,7;CL:0002076,4.68e-12,15;CL:0000223,3.81e-09,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!6.40e-18!15;UBERON:0001242!7.59e-12!13;UBERON:0000060!7.59e-12!13;UBERON:0001262!7.59e-12!13;UBERON:0004786!7.59e-12!13;UBERON:0004923!8.49e-11!24;UBERON:0001962!7.45e-10!2;UBERON:0001961!7.45e-10!2;UBERON:0001744!7.45e-10!2;UBERON:0003350!3.06e-08!9;UBERON:0004808!3.06e-08!9;UBERON:0001277!3.06e-08!9;UBERON:0002465!7.77e-07!3;UBERON:0000485!9.44e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,9.18e-20,9;UBERON:0004808,9.18e-20,9;UBERON:0001277,9.18e-20,9;UBERON:0000344,2.27e-18,15;UBERON:0000485,2.88e-16,11;UBERON:0001242,7.69e-14,13;UBERON:0001262,7.69e-14,13;UBERON:0004786,7.69e-14,13;UBERON:0004923,1.38e-11,24;UBERON:0001962,9.80e-07,2;UBERON:0001961,9.80e-07,2;UBERON:0001744,9.80e-07,2 | |||
|phase1_expression=0,1.74487703819681,3.63999391511629,0,0,2.35030980676646,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75991665072747,0.91763712426868,1.72269589234506,2.58457197695445,5.60225204983311,0.190023419456374,0,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0.15241361331,0,0,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:6120193..6120204,- | |||
}} |
Latest revision as of 10:57, 5 August 2015
Short description: | p@chr7:6120193..6120204, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:6120193..6120204, - |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.31e-33 | 3 |
brush border epithelial cell | 2.40e-29 | 6 |
gut absorptive cell | 2.40e-29 | 6 |
enterocyte | 2.40e-29 | 6 |
columnar/cuboidal epithelial cell | 3.04e-25 | 7 |
epithelial cell | 1.94e-21 | 25 |
intestinal epithelial cell | 9.18e-20 | 9 |
epithelial cell of alimentary canal | 9.18e-20 | 9 |
defensive cell | 7.21e-15 | 7 |
endo-epithelial cell | 4.68e-12 | 15 |
endodermal cell | 3.81e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 9.18e-20 | 9 |
gastrointestinal system epithelium | 9.18e-20 | 9 |
intestinal epithelium | 9.18e-20 | 9 |
mucosa | 2.27e-18 | 15 |
simple columnar epithelium | 2.88e-16 | 11 |
intestinal mucosa | 7.69e-14 | 13 |
wall of intestine | 7.69e-14 | 13 |
gastrointestinal system mucosa | 7.69e-14 | 13 |
organ component layer | 1.38e-11 | 24 |
gut-associated lymphoid tissue | 9.80e-07 | 2 |
mucosa-associated lymphoid tissue | 9.80e-07 | 2 |
lymphoid tissue | 9.80e-07 | 2 |