FFCP PHASE1:Mm9::chr1:186706870..186706910,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=226777|HGNC=|MCL_coexpression_id=1749|UniProt=Q8BGN9|association_with_transcript=4bp_to_NM_178692,uc007dys.1_5end|description=CAGE_peak_1_at_C130074G19Rik_5end|id=chr1:186706870..186706910,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005177!6.77e-12!85;UBERON:0009569!2.57e-11!66;UBERON:0002365!4.52e-11!25;UBERON:0002330!4.52e-11!25;UBERON:0000466!6.99e-11!79;UBERON:0000160!7.75e-11!43;UBERON:0002107!7.81e-10!22;UBERON:0007499!7.81e-10!22;UBERON:0006925!7.81e-10!22;UBERON:0009497!7.81e-10!22;UBERON:0000015!7.81e-10!22;UBERON:0002423!7.81e-10!22;UBERON:0006235!7.81e-10!22;UBERON:0008835!7.81e-10!22;UBERON:0003894!7.81e-10!22;UBERON:0004161!7.81e-10!22;UBERON:0008836!7.81e-10!22;UBERON:0009854!7.82e-10!23;UBERON:0009856!7.82e-10!23;UBERON:0001007!8.07e-10!128;UBERON:0001555!8.07e-10!128;UBERON:0007026!8.07e-10!128;UBERON:0005172!9.26e-10!49;UBERON:0005173!9.26e-10!49;UBERON:0002417!9.26e-10!49;UBERON:0000916!9.26e-10!49;UBERON:0004119!1.30e-09!130;UBERON:0000925!1.30e-09!130;UBERON:0006595!1.30e-09!130;UBERON:0000344!2.96e-09!15;UBERON:0004921!5.28e-09!126;UBERON:0004185!5.28e-09!126;UBERON:0001242!4.15e-08!13;UBERON:0000060!4.15e-08!13;UBERON:0001262!4.15e-08!13;UBERON:0004786!4.15e-08!13;UBERON:0005409!6.49e-08!59;UBERON:0002100!1.82e-07!98|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.31e-12,79;UBERON:0009569,2.99e-11,66;UBERON:0002365,4.28e-11,25;UBERON:0002330,4.28e-11,25;UBERON:0000160,1.48e-10,31;UBERON:0002107,7.44e-10,22;UBERON:0007499,7.44e-10,22;UBERON:0006925,7.44e-10,22;UBERON:0009497,7.44e-10,22;UBERON:0000015,7.44e-10,22;UBERON:0002423,7.44e-10,22;UBERON:0006235,7.44e-10,22;UBERON:0008835,7.44e-10,22;UBERON:0003894,7.44e-10,22;UBERON:0004161,7.44e-10,22;UBERON:0008836,7.44e-10,22;UBERON:0009854,7.46e-10,23;UBERON:0009856,7.46e-10,23;UBERON:0005172,1.10e-09,49;UBERON:0005173,1.10e-09,49;UBERON:0002417,1.10e-09,49;UBERON:0000916,1.10e-09,49;UBERON:0000344,2.83e-09,15;UBERON:0001007,1.36e-08,116;UBERON:0001555,1.36e-08,116;UBERON:0007026,1.36e-08,116;UBERON:0002100,1.74e-08,90;UBERON:0004119,2.17e-08,118;UBERON:0000925,2.17e-08,118;UBERON:0006595,2.17e-08,118;UBERON:0001242,4.00e-08,13;UBERON:0001262,4.00e-08,13;UBERON:0004786,4.00e-08,13;UBERON:0004921,7.96e-08,114;UBERON:0005409,6.12e-07,47|phase1_expression=5.60520964866779,398.52991552415,475.474205162065,242.576297468078,266.476528331457,130.442194275538,117.507158219549,0,0,0,0,0,0,0.0874204024189974,0.666219523631325,0,0,0,0,0,25.9382034960763,0,0,99.6752794002924,95.8930794860771,307.214100801536,245.965099806832,193.062224486557,72.3989228128785,52.6742971198255,60.9758904302088,0,0,0,24.8412392986096,20.7793306698115,23.0711372576477,0,0,0,0,0.683045484958446,0,2.51793635951155,2.83855407414641,0.367093504323363,9.38869613217647,1.09012578190223,3.95435128922049,1.74986909166855,11.198913730029,2.87505128729943,0,0,0,1.02903774414379,3.72493471920384,2.57836046138721,3.64169629547276,4.7609188134483,10.1413024560989,4.40497891689872,3.55717918444456,0,1.97773272513395,0,5.99200221036809,2.30530983192933,5.91030790158323,8.50537411489651,5.67877395648731,9.14083150092171,9.718215801871,2.57230678351403,2.68367318851062,4.5960939330501,5.50579404996943,11.7472351038373,8.44835932909339,5.53922408466814,4.66586982372289,6.25096044668112,8.65467296904281,6.75315132038016,7.63991238884051,10.606629077052,12.386336229522,6.71038004971082,0.681535739998656,0.377857800533928,17.102004833399,73.9964534203992,72.7569327067293,201.848993672544,126.056624984848,121.415286403378,44.6613256018971,0.170430322578058,1.03914401841148,0,0.704217098883403,1.28326477414318,2.54805239706646,7.11066703153331,1.5154372870785,1.77351905832569,3.53867111510348,69.5379827489075,10.0985774622397,14.8442139064825,6.24547176358089,11.2652226975492,8.99400439298628,9.19408107370998,12.1116368349776,19.729654838759,100.60835186789,24.8710893902248,6.19227386364912,8.57364304721269,9.27534377533653,7.75800405016355,14.9113408974498,6.14839673724249,5.02672096352292,32.9539601219083,0,0.599902730993408,0.127070227073065,6.29120685500255,7.32000964509802,2.1361239859187,10.6032835317289,12.5300574091862,10.1816141834184,7.94982189032012,23.9322505048243,16.7949410323626,14.6579199891531,11.3638602178696,5.33493816147085,5.9774547152703,4.14142898552303,6.93242162044289,3.81004395247436,6.40568601424249,6.09061209638237,10.8655415710387,2.80238390812695,5.8622884852024,3.87092473160687,4.82230611340665,8.61946472599353,8.00979983000983,11.9353639116607,11.5439874754726,0.702213187313235,0.257347907114715,0,1.24275463521301,4.92504725960302,5.40186184383045,6.15536312521547,8.06733350164356,9.56456099901745,11.39416329277,8.58474884478781,10.9759421825139,7.40519324610662,19.5359282254123,21.0778904819225,13.7427988179812,17.7835593385751,21.2046141641387,5.88811855979556,5.45394445610208,51.5453301454725,43.6343434994848,6.82522401712749,6.0381534683714,9.665059599157,9.68080918192044,12.6755484991576,14.8375988367796,35.1151505542939,34.9161784014903,33.4275827704358,23.2779072288146,26.7100799353195,41.3456927980942,36.0950543290739,38.2351244648385,5.31070122668629,10.7393601853145,14.6520056375005,21.5870407516033,26.5714907419647,30.5090816522886,51.3480681448969,95.9465961867414,89.8032723252664,119.078263184538,74.4096093988744,8.00856507437251,13.3660116676978,11.2431056192427,18.2574109249653,24.6000702947465,29.2819729548633,46.0313819921297,64.205549802914,57.9324581826852,176.834894028646,106.80445198086,108.589110243867,103.304761080369,85.0343740093864,145.697943451737,33.6250806103221,4.16881105895066,8.47417877498535,15.6165478913173,16.1936271319066,19.095713348367,29.0413241880937,21.0744339686423,35.467907423893,34.5484915852089,30.2964060449225,37.524699069904,31.9467216451907,38.7659476998451,0,0,24.5882136509518,33.6642830491774,9.63303539926752,9.25972324078405,0,31.0539240461379,0.315508219416257,0,0,0,0,0.566153061577665,0,0.292255857911312,0,11.2462460747632,39.3174036026904,20.1214132143998,25.5732526185114,24.9104885688529,7.96470830039777,8.98288353773431,12.9999129494843,15.8428266994954,12.993283286754,16.6014979889721,31.528251766523,23.2661586865604,16.0423820273125,12.9575070753685,18.9753495434998,10.3135543248187,2.04263763452273,6.84232157318979,10.0899773350549,13.5032332069903,15.2512600932355,15.6964559489822,13.9866667511803,10.656273219011,3.75474732901937,12.921756322693,21.8323114074412,23.5787341706316,14.6932628293274,15.0179183071108,15.1602876883983,9.35603128546849,42.5562021479582,7.41701208042039,2.22132145037209,23.5281029478074,16.2971184085346,4.89757988212197,0.683471138605126,2.97411625168479,0.509935289981566,0.839708713941948,0.276399947608848,4.77335309007557,3.32152793260192,8.94605655358134,11.8805874903981,11.0816796887668,12.8833912610245,9.30563990055263,21.7378588557633,4.97336289769656,16.3314866347659,60.2699133694318,3.94585057078933,7.47582730219894,9.59659244651166,11.2781689239548,15.1116993468945,15.0370951686793,17.4862285582173,10.1559420178281,4.92838918800841,4.34851417486811,7.4887801627045,3.47612232690996,4.86540516696394,4.31386020092274,2.98817892848929,2.14832034800978,2.38417625737518,3.00488623799922,2.65841148914239,3.12995994839258,3.27689268616499,2.41982844328417,2.43644701849381,1.44317762460494,2.68816875017609,9.74940649545409,1.77588762699252,0.448569283047378,0.167884616364078,23.7623200659594,21.5834846768859,14.1026750685794,11.7902608493486,18.5581678493084,5.64751842617067,5.52390283808612,8.59343270159095,6.35856774671644,10.2762377965596,13.5970901530146,12.8254275044043,11.7083512838297,7.25027854374727,11.39072685854,2.80225838477277,5.1873233542134,7.34154504742777,10.4535888339366,10.6902712940271,23.3481255731518,17.335244768526,19.5733304376949,14.4413644316317,14.1510438587727,19.2644267916582,13.7697229211836,12.4543204934944,11.9086783473057,13.2675933287467,10.0021675169445,14.0220034393275,14.8540099757053,14.0109206273124,18.1054671765309,13.3719008430312,18.4574838405711,15.7367885365232,17.2962235792471,17.9748916593281,16.2460047152019,15.9147336399312,18.414879800649,14.2594319538155,19.6399795080208,18.388427809247,14.0861409797056,15.1415485972785,17.0430525304563,14.4679958235856,9.74261253957989,14.9716229405061,17.6194264319605,13.7727599089567,18.5296792060393,20.4043695345971|short_description=p1@C130074G19Rik}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:226777 | |||
|HGNC= | |||
|MCL_coexpression_id=1749 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BGN9 | |||
|association_with_transcript=4bp_to_NM_178692,uc007dys.1_5end | |||
|cluster_id=chr1:186706870..186706910,- | |||
|description=CAGE_peak_1_at_C130074G19Rik_5end | |||
|id=chr1:186706870..186706910,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005177!6.77e-12!85;UBERON:0009569!2.57e-11!66;UBERON:0002365!4.52e-11!25;UBERON:0002330!4.52e-11!25;UBERON:0000466!6.99e-11!79;UBERON:0000160!7.75e-11!43;UBERON:0002107!7.81e-10!22;UBERON:0007499!7.81e-10!22;UBERON:0006925!7.81e-10!22;UBERON:0009497!7.81e-10!22;UBERON:0000015!7.81e-10!22;UBERON:0002423!7.81e-10!22;UBERON:0006235!7.81e-10!22;UBERON:0008835!7.81e-10!22;UBERON:0003894!7.81e-10!22;UBERON:0004161!7.81e-10!22;UBERON:0008836!7.81e-10!22;UBERON:0009854!7.82e-10!23;UBERON:0009856!7.82e-10!23;UBERON:0001007!8.07e-10!128;UBERON:0001555!8.07e-10!128;UBERON:0007026!8.07e-10!128;UBERON:0005172!9.26e-10!49;UBERON:0005173!9.26e-10!49;UBERON:0002417!9.26e-10!49;UBERON:0000916!9.26e-10!49;UBERON:0004119!1.30e-09!130;UBERON:0000925!1.30e-09!130;UBERON:0006595!1.30e-09!130;UBERON:0000344!2.96e-09!15;UBERON:0004921!5.28e-09!126;UBERON:0004185!5.28e-09!126;UBERON:0001242!4.15e-08!13;UBERON:0000060!4.15e-08!13;UBERON:0001262!4.15e-08!13;UBERON:0004786!4.15e-08!13;UBERON:0005409!6.49e-08!59;UBERON:0002100!1.82e-07!98 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.31e-12,79;UBERON:0009569,2.99e-11,66;UBERON:0002365,4.28e-11,25;UBERON:0002330,4.28e-11,25;UBERON:0000160,1.48e-10,31;UBERON:0002107,7.44e-10,22;UBERON:0007499,7.44e-10,22;UBERON:0006925,7.44e-10,22;UBERON:0009497,7.44e-10,22;UBERON:0000015,7.44e-10,22;UBERON:0002423,7.44e-10,22;UBERON:0006235,7.44e-10,22;UBERON:0008835,7.44e-10,22;UBERON:0003894,7.44e-10,22;UBERON:0004161,7.44e-10,22;UBERON:0008836,7.44e-10,22;UBERON:0009854,7.46e-10,23;UBERON:0009856,7.46e-10,23;UBERON:0005172,1.10e-09,49;UBERON:0005173,1.10e-09,49;UBERON:0002417,1.10e-09,49;UBERON:0000916,1.10e-09,49;UBERON:0000344,2.83e-09,15;UBERON:0001007,1.36e-08,116;UBERON:0001555,1.36e-08,116;UBERON:0007026,1.36e-08,116;UBERON:0002100,1.74e-08,90;UBERON:0004119,2.17e-08,118;UBERON:0000925,2.17e-08,118;UBERON:0006595,2.17e-08,118;UBERON:0001242,4.00e-08,13;UBERON:0001262,4.00e-08,13;UBERON:0004786,4.00e-08,13;UBERON:0004921,7.96e-08,114;UBERON:0005409,6.12e-07,47 | |||
|phase1_expression=5.60520964866779,398.52991552415,475.474205162065,242.576297468078,266.476528331457,130.442194275538,117.507158219549,0,0,0,0,0,0,0.0874204024189974,0.666219523631325,0,0,0,0,0,25.9382034960763,0,0,99.6752794002924,95.8930794860771,307.214100801536,245.965099806832,193.062224486557,72.3989228128785,52.6742971198255,60.9758904302088,0,0,0,24.8412392986096,20.7793306698115,23.0711372576477,0,0,0,0,0.683045484958446,0,2.51793635951155,2.83855407414641,0.367093504323363,9.38869613217647,1.09012578190223,3.95435128922049,1.74986909166855,11.198913730029,2.87505128729943,0,0,0,1.02903774414379,3.72493471920384,2.57836046138721,3.64169629547276,4.7609188134483,10.1413024560989,4.40497891689872,3.55717918444456,0,1.97773272513395,0,5.99200221036809,2.30530983192933,5.91030790158323,8.50537411489651,5.67877395648731,9.14083150092171,9.718215801871,2.57230678351403,2.68367318851062,4.5960939330501,5.50579404996943,11.7472351038373,8.44835932909339,5.53922408466814,4.66586982372289,6.25096044668112,8.65467296904281,6.75315132038016,7.63991238884051,10.606629077052,12.386336229522,6.71038004971082,0.681535739998656,0.377857800533928,17.102004833399,73.9964534203992,72.7569327067293,201.848993672544,126.056624984848,121.415286403378,44.6613256018971,0.170430322578058,1.03914401841148,0,0.704217098883403,1.28326477414318,2.54805239706646,7.11066703153331,1.5154372870785,1.77351905832569,3.53867111510348,69.5379827489075,10.0985774622397,14.8442139064825,6.24547176358089,11.2652226975492,8.99400439298628,9.19408107370998,12.1116368349776,19.729654838759,100.60835186789,24.8710893902248,6.19227386364912,8.57364304721269,9.27534377533653,7.75800405016355,14.9113408974498,6.14839673724249,5.02672096352292,32.9539601219083,0,0.599902730993408,0.127070227073065,6.29120685500255,7.32000964509802,2.1361239859187,10.6032835317289,12.5300574091862,10.1816141834184,7.94982189032012,23.9322505048243,16.7949410323626,14.6579199891531,11.3638602178696,5.33493816147085,5.9774547152703,4.14142898552303,6.93242162044289,3.81004395247436,6.40568601424249,6.09061209638237,10.8655415710387,2.80238390812695,5.8622884852024,3.87092473160687,4.82230611340665,8.61946472599353,8.00979983000983,11.9353639116607,11.5439874754726,0.702213187313235,0.257347907114715,0,1.24275463521301,4.92504725960302,5.40186184383045,6.15536312521547,8.06733350164356,9.56456099901745,11.39416329277,8.58474884478781,10.9759421825139,7.40519324610662,19.5359282254123,21.0778904819225,13.7427988179812,17.7835593385751,21.2046141641387,5.88811855979556,5.45394445610208,51.5453301454725,43.6343434994848,6.82522401712749,6.0381534683714,9.665059599157,9.68080918192044,12.6755484991576,14.8375988367796,35.1151505542939,34.9161784014903,33.4275827704358,23.2779072288146,26.7100799353195,41.3456927980942,36.0950543290739,38.2351244648385,5.31070122668629,10.7393601853145,14.6520056375005,21.5870407516033,26.5714907419647,30.5090816522886,51.3480681448969,95.9465961867414,89.8032723252664,119.078263184538,74.4096093988744,8.00856507437251,13.3660116676978,11.2431056192427,18.2574109249653,24.6000702947465,29.2819729548633,46.0313819921297,64.205549802914,57.9324581826852,176.834894028646,106.80445198086,108.589110243867,103.304761080369,85.0343740093864,145.697943451737,33.6250806103221,4.16881105895066,8.47417877498535,15.6165478913173,16.1936271319066,19.095713348367,29.0413241880937,21.0744339686423,35.467907423893,34.5484915852089,30.2964060449225,37.524699069904,31.9467216451907,38.7659476998451,0,0,24.5882136509518,33.6642830491774,9.63303539926752,9.25972324078405,0,31.0539240461379,0.315508219416257,0,0,0,0,0.566153061577665,0,0.292255857911312,0,11.2462460747632,39.3174036026904,20.1214132143998,25.5732526185114,24.9104885688529,7.96470830039777,8.98288353773431,12.9999129494843,15.8428266994954,12.993283286754,16.6014979889721,31.528251766523,23.2661586865604,16.0423820273125,12.9575070753685,18.9753495434998,10.3135543248187,2.04263763452273,6.84232157318979,10.0899773350549,13.5032332069903,15.2512600932355,15.6964559489822,13.9866667511803,10.656273219011,3.75474732901937,12.921756322693,21.8323114074412,23.5787341706316,14.6932628293274,15.0179183071108,15.1602876883983,9.35603128546849,42.5562021479582,7.41701208042039,2.22132145037209,23.5281029478074,16.2971184085346,4.89757988212197,0.683471138605126,2.97411625168479,0.509935289981566,0.839708713941948,0.276399947608848,4.77335309007557,3.32152793260192,8.94605655358134,11.8805874903981,11.0816796887668,12.8833912610245,9.30563990055263,21.7378588557633,4.97336289769656,16.3314866347659,60.2699133694318,3.94585057078933,7.47582730219894,9.59659244651166,11.2781689239548,15.1116993468945,15.0370951686793,17.4862285582173,10.1559420178281,4.92838918800841,4.34851417486811,7.4887801627045,3.47612232690996,4.86540516696394,4.31386020092274,2.98817892848929,2.14832034800978,2.38417625737518,3.00488623799922,2.65841148914239,3.12995994839258,3.27689268616499,2.41982844328417,2.43644701849381,1.44317762460494,2.68816875017609,9.74940649545409,1.77588762699252,0.448569283047378,0.167884616364078,23.7623200659594,21.5834846768859,14.1026750685794,11.7902608493486,18.5581678493084,5.64751842617067,5.52390283808612,8.59343270159095,6.35856774671644,10.2762377965596,13.5970901530146,12.8254275044043,11.7083512838297,7.25027854374727,11.39072685854,2.80225838477277,5.1873233542134,7.34154504742777,10.4535888339366,10.6902712940271,23.3481255731518,17.335244768526,19.5733304376949,14.4413644316317,14.1510438587727,19.2644267916582,13.7697229211836,12.4543204934944,11.9086783473057,13.2675933287467,10.0021675169445,14.0220034393275,14.8540099757053,14.0109206273124,18.1054671765309,13.3719008430312,18.4574838405711,15.7367885365232,17.2962235792471,17.9748916593281,16.2460047152019,15.9147336399312,18.414879800649,14.2594319538155,19.6399795080208,18.388427809247,14.0861409797056,15.1415485972785,17.0430525304563,14.4679958235856,9.74261253957989,14.9716229405061,17.6194264319605,13.7727599089567,18.5296792060393,20.4043695345971 | |||
|short_description=p1@C130074G19Rik | |||
}} |
Revision as of 10:53, 5 August 2015
Short description: | p1@C130074G19Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_C130074G19Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:1749 |
Association with transcript: | 4bp_to_NM_178692, uc007dys.1_5end |
EntrezGene: | 226777 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk region element | 1.31e-12 | 79 |
subdivision of trunk | 2.99e-11 | 66 |
exocrine gland | 4.28e-11 | 25 |
exocrine system | 4.28e-11 | 25 |
intestine | 1.48e-10 | 31 |
liver | 7.44e-10 | 22 |
epithelial sac | 7.44e-10 | 22 |
digestive gland | 7.44e-10 | 22 |
epithelium of foregut-midgut junction | 7.44e-10 | 22 |
anatomical boundary | 7.44e-10 | 22 |
hepatobiliary system | 7.44e-10 | 22 |
foregut-midgut junction | 7.44e-10 | 22 |
hepatic diverticulum | 7.44e-10 | 22 |
liver primordium | 7.44e-10 | 22 |
septum transversum | 7.44e-10 | 22 |
liver bud | 7.44e-10 | 22 |
digestive tract diverticulum | 7.46e-10 | 23 |
sac | 7.46e-10 | 23 |
abdomen element | 1.10e-09 | 49 |
abdominal segment element | 1.10e-09 | 49 |
abdominal segment of trunk | 1.10e-09 | 49 |
abdomen | 1.10e-09 | 49 |
mucosa | 2.83e-09 | 15 |
digestive system | 1.36e-08 | 116 |
digestive tract | 1.36e-08 | 116 |
primitive gut | 1.36e-08 | 116 |
trunk | 1.74e-08 | 90 |
endoderm-derived structure | 2.17e-08 | 118 |
endoderm | 2.17e-08 | 118 |
presumptive endoderm | 2.17e-08 | 118 |
intestinal mucosa | 4.00e-08 | 13 |
wall of intestine | 4.00e-08 | 13 |
gastrointestinal system mucosa | 4.00e-08 | 13 |
subdivision of digestive tract | 7.96e-08 | 114 |
gastrointestinal system | 6.12e-07 | 47 |