FFCP PHASE1:Mm9::chr12:80118328..80118339,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=58|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:80118328..80118339,-|id=chr12:80118328..80118339,-|ontology_enrichment_celltype=CL:0000473!4.98e-22!3;CL:0000627!4.98e-22!3;CL:0000682!4.98e-22!3;CL:0000239!1.62e-18!6;CL:0000677!1.62e-18!6;CL:0000212!1.62e-18!6;CL:0000584!1.62e-18!6;CL:0000075!6.39e-16!7;CL:0000066!3.52e-13!25;CL:0002563!1.88e-12!9;CL:0002251!1.88e-12!9;CL:0002076!1.45e-07!15|ontology_enrichment_celltype_v019_2=CL:0000682,1.46e-25,3;CL:0000239,1.52e-21,6;CL:0000677,1.52e-21,6;CL:0000584,1.52e-21,6;CL:0000473,4.45e-19,7;CL:0000075,1.57e-18,7;CL:0000066,1.41e-15,25;CL:0002563,1.68e-14,9;CL:0002251,1.68e-14,9;CL:0002076,7.93e-09,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.26e-21!15;UBERON:0001962!1.68e-14!2;UBERON:0001961!1.68e-14!2;UBERON:0001744!1.68e-14!2;UBERON:0004923!2.32e-13!24;UBERON:0001242!4.82e-13!13;UBERON:0000060!4.82e-13!13;UBERON:0001262!4.82e-13!13;UBERON:0004786!4.82e-13!13;UBERON:0003350!1.88e-12!9;UBERON:0004808!1.88e-12!9;UBERON:0001277!1.88e-12!9;UBERON:0000485!3.09e-10!11;UBERON:0002465!5.56e-10!3;UBERON:0003199!3.50e-08!1|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.19e-25,15;UBERON:0001962,9.93e-17,2;UBERON:0001961,9.93e-17,2;UBERON:0001744,9.93e-17,2;UBERON:0004923,8.88e-16,24;UBERON:0001242,2.93e-15,13;UBERON:0001262,2.93e-15,13;UBERON:0004786,2.93e-15,13;UBERON:0003350,1.68e-14,9;UBERON:0004808,1.68e-14,9;UBERON:0001277,1.68e-14,9;UBERON:0000485,6.29e-12,11;UBERON:0002465,1.75e-11,3;UBERON:0003199,2.52e-09,1|phase1_expression=0,4.53668029931169,4.54999239389536,0,0,3.3575854382378,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,2.55987876469451,3.67054849707472,4.59385571292016,5.59990595006797,6.89507944594845,0,0,1.55211357458713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.26343410291226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr12:80118328..80118339,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:80118328..80118339,- | |||
|description=CAGE_peak_at_chr12:80118328..80118339,- | |||
|id=chr12:80118328..80118339,- | |||
|ontology_enrichment_celltype=CL:0000473!4.98e-22!3;CL:0000627!4.98e-22!3;CL:0000682!4.98e-22!3;CL:0000239!1.62e-18!6;CL:0000677!1.62e-18!6;CL:0000212!1.62e-18!6;CL:0000584!1.62e-18!6;CL:0000075!6.39e-16!7;CL:0000066!3.52e-13!25;CL:0002563!1.88e-12!9;CL:0002251!1.88e-12!9;CL:0002076!1.45e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.46e-25,3;CL:0000239,1.52e-21,6;CL:0000677,1.52e-21,6;CL:0000584,1.52e-21,6;CL:0000473,4.45e-19,7;CL:0000075,1.57e-18,7;CL:0000066,1.41e-15,25;CL:0002563,1.68e-14,9;CL:0002251,1.68e-14,9;CL:0002076,7.93e-09,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.26e-21!15;UBERON:0001962!1.68e-14!2;UBERON:0001961!1.68e-14!2;UBERON:0001744!1.68e-14!2;UBERON:0004923!2.32e-13!24;UBERON:0001242!4.82e-13!13;UBERON:0000060!4.82e-13!13;UBERON:0001262!4.82e-13!13;UBERON:0004786!4.82e-13!13;UBERON:0003350!1.88e-12!9;UBERON:0004808!1.88e-12!9;UBERON:0001277!1.88e-12!9;UBERON:0000485!3.09e-10!11;UBERON:0002465!5.56e-10!3;UBERON:0003199!3.50e-08!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.19e-25,15;UBERON:0001962,9.93e-17,2;UBERON:0001961,9.93e-17,2;UBERON:0001744,9.93e-17,2;UBERON:0004923,8.88e-16,24;UBERON:0001242,2.93e-15,13;UBERON:0001262,2.93e-15,13;UBERON:0004786,2.93e-15,13;UBERON:0003350,1.68e-14,9;UBERON:0004808,1.68e-14,9;UBERON:0001277,1.68e-14,9;UBERON:0000485,6.29e-12,11;UBERON:0002465,1.75e-11,3;UBERON:0003199,2.52e-09,1 | |||
|phase1_expression=0,4.53668029931169,4.54999239389536,0,0,3.3575854382378,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,2.55987876469451,3.67054849707472,4.59385571292016,5.59990595006797,6.89507944594845,0,0,1.55211357458713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.26343410291226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:80118328..80118339,- | |||
}} |
Latest revision as of 07:13, 5 August 2015
Short description: | p@chr12:80118328..80118339, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:80118328..80118339, - |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.46e-25 | 3 |
brush border epithelial cell | 1.52e-21 | 6 |
gut absorptive cell | 1.52e-21 | 6 |
enterocyte | 1.52e-21 | 6 |
defensive cell | 4.45e-19 | 7 |
columnar/cuboidal epithelial cell | 1.57e-18 | 7 |
epithelial cell | 1.41e-15 | 25 |
intestinal epithelial cell | 1.68e-14 | 9 |
epithelial cell of alimentary canal | 1.68e-14 | 9 |
endo-epithelial cell | 7.93e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.19e-25 | 15 |
gut-associated lymphoid tissue | 9.93e-17 | 2 |
mucosa-associated lymphoid tissue | 9.93e-17 | 2 |
lymphoid tissue | 9.93e-17 | 2 |
organ component layer | 8.88e-16 | 24 |
intestinal mucosa | 2.93e-15 | 13 |
wall of intestine | 2.93e-15 | 13 |
gastrointestinal system mucosa | 2.93e-15 | 13 |
epithelium of mucosa | 1.68e-14 | 9 |
gastrointestinal system epithelium | 1.68e-14 | 9 |
intestinal epithelium | 1.68e-14 | 9 |
simple columnar epithelium | 6.29e-12 | 11 |
lymphoid system | 1.75e-11 | 3 |
egg chamber | 2.52e-09 | 1 |