FFCP PHASE1:Mm9::chr15:37162834..37162849,+: Difference between revisions
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{{FFCP|EntrezGene=252973|HGNC=|UniProt=F6TZV3|association_with_transcript=21bp_to_ENSMUST00000161532_5end|description=CAGE_peak_2_at_Grhl2_5end|id=chr15:37162834..37162849,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!6.33e-16!59;UBERON:0000160!1.11e-14!43;UBERON:0004119!4.95e-14!130;UBERON:0000925!4.95e-14!130;UBERON:0006595!4.95e-14!130;UBERON:0001007!5.20e-13!128;UBERON:0001555!5.20e-13!128;UBERON:0007026!5.20e-13!128;UBERON:0004921!1.43e-12!126;UBERON:0004185!1.43e-12!126;UBERON:0005178!7.67e-08!17;UBERON:0005181!7.67e-08!17;UBERON:0002224!7.67e-08!17;UBERON:0000915!7.67e-08!17;UBERON:0008947!7.67e-08!17;UBERON:0003258!7.67e-08!17;UBERON:0005153!1.71e-07!17;UBERON:0000344!9.32e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0005409,8.24e-16,47;UBERON:0000160,1.37e-13,31;UBERON:0004119,1.93e-11,118;UBERON:0000925,1.93e-11,118;UBERON:0006595,1.93e-11,118;UBERON:0001007,2.04e-10,116;UBERON:0001555,2.04e-10,116;UBERON:0007026,2.04e-10,116;UBERON:0004921,5.63e-10,114;UBERON:0001008,1.21e-08,19;UBERON:0006554,7.62e-08,18;UBERON:0000344,8.02e-08,15;UBERON:0005178,1.15e-07,17;UBERON:0005181,1.15e-07,17;UBERON:0002224,1.15e-07,17;UBERON:0000915,1.15e-07,17;UBERON:0008947,1.15e-07,17;UBERON:0003258,1.15e-07,17;UBERON:0001242,1.47e-07,13;UBERON:0001262,1.47e-07,13;UBERON:0004786,1.47e-07,13;UBERON:0005153,2.75e-07,17;UBERON:0000485,3.51e-07,11|phase1_expression=1.60148847104794,1.74487703819681,3.18499467572675,1.20985684522732,3.00537437967808,3.86122325397347,4.20502753071946,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,1.59992422793407,1.14704640533585,1.14846392823004,2.15380998079537,3.01659725760245,1.90023419456374,1.76421090831952,1.77384408524244,0,0,0,3.46621943701529,2.32728503501889,4.28755648150975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,0,0,0,0,0,0.983110940922263,0,0,0,2.67602497575693,0,0,0,6.49473123033642,11.6545538118545,10.6160133453104,0.91347103775248,0,0,0,0,0,0,0,0,2.22475470960936,0,0,0,0,0,5.59175283654366,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0.203678727700633,1.49288364732112,7.83440551144392,4.62972082950243,1.56144531555244,0.229902104433473,0.720248519221397,0.452114453507145,0.204109497453984,0.384341160854549,0.562210347358373,1.29351685369508,0.862271971731369,1.32374256117473,1.40760899331159,0.657587197282725,1.11218899690239,2.089512999133,2.26360350048738,0.199034266818493,0,0,0,0,0,0,0,0,0.308534225774757,0,0.268273401399619,0,0,0,0,0,0,0,0,0,1.65209391491899,1.58670339998127,0.639864751605702,1.62565670302307,2.19074684247559,2.62188582010345,2.44615848229357,1.52180500890047,1.42358718463353,2.14108641141214,1.50801125280162,1.98956472041151,1.75467678407208,1.79763881730844,1.94524244887225,2.58883655230677,1.13800740571849,1.37098215131675,2.25415471346161,1.83286195060783,2.52138233317913,1.40271639780637,1.39120381673366,1.32849133181642,1.72698600625512,1.48076596706161,0,0,0,0,0,0,0,0.575392274901621,0,0,0,0,0,0,0,0,2.21703828199926,1.32643988239339,2.44447464663039,3.39490171550376,2.81628297946203,2.1775813467436,3.09456733151818,3.31727201358258,0.945810864637146,0.8858587585951,1.59454768657487,2.62181303545181,1.72684981865896,2.16973587872267,0,0,2.95058563811422,3.86311444826625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.534196811001766,0.162886959353576,4.45419332025846,0,3.39892890616974,3.93020624054176,2.45186603682668,1.77181135728464,1.53717573971964,1.55056975900933,2.18120237686503,1.06949213515416,3.47640433729398,1.05418608574999,1.03135543248187,0.340439605753788,1.08036656418786,1.03486947026204,1.92903331528433,0.177340233642274,0.713475270408282,0.987294123612726,0,3.28540391289194,4.44847348814022,5.95426674748397,2.4732937941222,2.74489525383039,3.98065304525829,4.17803204010978,3.44695889464629,2.62332752966866,0,0,0,0,0,0,0,0,0,0,4.77335309007557,1.89801596148681,2.64315307264903,2.80813886136683,5.22720740036172,3.9305261474312,4.04593039154462,2.31429676030941,3.14107130380836,3.6292192521702,3.10669656543463,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0.948033361884535,2.22997736819181,1.84879722896689,0.909445760844565,0.537080087002444,0.39736270956253,0.360586348559907,0.295379054349154,0.403865799792591,0.228620419965,0.504130925684203,0.487289403698762,0.481059208201647,0.116876902181569,4.0811469050738,4.43971906748129,1.34570784914214,4.7007692581942,6.76163579112667,2.25218970541418,8.42497471629419,7.5028932677673,13.5424468089548,0,0,0,0,0,0,0,0,0,0,0.830298780673413,0.399024873401031,0.170733605754134,0.729320151204882,0.419226325255965,0.735374033800057,1.11123363900808,2.06035057238894,0.962757628775446,1.26348605881899,0.760437899670719,2.07488975524684,1.03005658216871,1.21647789569252,0.976402972245426,1.42888107384922,1.39061191133827,0.964546102318525,2.06042950401653,1.61918812147837,0.685738504770831,1.24233064311536,0.476872379894642,0.581385666529314,0.941093804153306,0.761531471025089,0.914639864363863,0.526139422875686,1.08643291076689,0,0.830445126869219,1.0835493061312,1.63692417267876,0.929621047115796,1.35034627686799,1.24905288968973,0.935726433781634,0.644613162144895,0.382576664137687,0.661774257358546,0|short_description=p2@Grhl2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:252973 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F6TZV3 | |||
|association_with_transcript=21bp_to_ENSMUST00000161532_5end | |||
|cluster_id=chr15:37162834..37162849,+ | |||
|description=CAGE_peak_2_at_Grhl2_5end | |||
|id=chr15:37162834..37162849,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!6.33e-16!59;UBERON:0000160!1.11e-14!43;UBERON:0004119!4.95e-14!130;UBERON:0000925!4.95e-14!130;UBERON:0006595!4.95e-14!130;UBERON:0001007!5.20e-13!128;UBERON:0001555!5.20e-13!128;UBERON:0007026!5.20e-13!128;UBERON:0004921!1.43e-12!126;UBERON:0004185!1.43e-12!126;UBERON:0005178!7.67e-08!17;UBERON:0005181!7.67e-08!17;UBERON:0002224!7.67e-08!17;UBERON:0000915!7.67e-08!17;UBERON:0008947!7.67e-08!17;UBERON:0003258!7.67e-08!17;UBERON:0005153!1.71e-07!17;UBERON:0000344!9.32e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,8.24e-16,47;UBERON:0000160,1.37e-13,31;UBERON:0004119,1.93e-11,118;UBERON:0000925,1.93e-11,118;UBERON:0006595,1.93e-11,118;UBERON:0001007,2.04e-10,116;UBERON:0001555,2.04e-10,116;UBERON:0007026,2.04e-10,116;UBERON:0004921,5.63e-10,114;UBERON:0001008,1.21e-08,19;UBERON:0006554,7.62e-08,18;UBERON:0000344,8.02e-08,15;UBERON:0005178,1.15e-07,17;UBERON:0005181,1.15e-07,17;UBERON:0002224,1.15e-07,17;UBERON:0000915,1.15e-07,17;UBERON:0008947,1.15e-07,17;UBERON:0003258,1.15e-07,17;UBERON:0001242,1.47e-07,13;UBERON:0001262,1.47e-07,13;UBERON:0004786,1.47e-07,13;UBERON:0005153,2.75e-07,17;UBERON:0000485,3.51e-07,11 | |||
|phase1_expression=1.60148847104794,1.74487703819681,3.18499467572675,1.20985684522732,3.00537437967808,3.86122325397347,4.20502753071946,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,1.59992422793407,1.14704640533585,1.14846392823004,2.15380998079537,3.01659725760245,1.90023419456374,1.76421090831952,1.77384408524244,0,0,0,3.46621943701529,2.32728503501889,4.28755648150975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,0,0,0,0,0,0.983110940922263,0,0,0,2.67602497575693,0,0,0,6.49473123033642,11.6545538118545,10.6160133453104,0.91347103775248,0,0,0,0,0,0,0,0,2.22475470960936,0,0,0,0,0,5.59175283654366,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0.203678727700633,1.49288364732112,7.83440551144392,4.62972082950243,1.56144531555244,0.229902104433473,0.720248519221397,0.452114453507145,0.204109497453984,0.384341160854549,0.562210347358373,1.29351685369508,0.862271971731369,1.32374256117473,1.40760899331159,0.657587197282725,1.11218899690239,2.089512999133,2.26360350048738,0.199034266818493,0,0,0,0,0,0,0,0,0.308534225774757,0,0.268273401399619,0,0,0,0,0,0,0,0,0,1.65209391491899,1.58670339998127,0.639864751605702,1.62565670302307,2.19074684247559,2.62188582010345,2.44615848229357,1.52180500890047,1.42358718463353,2.14108641141214,1.50801125280162,1.98956472041151,1.75467678407208,1.79763881730844,1.94524244887225,2.58883655230677,1.13800740571849,1.37098215131675,2.25415471346161,1.83286195060783,2.52138233317913,1.40271639780637,1.39120381673366,1.32849133181642,1.72698600625512,1.48076596706161,0,0,0,0,0,0,0,0.575392274901621,0,0,0,0,0,0,0,0,2.21703828199926,1.32643988239339,2.44447464663039,3.39490171550376,2.81628297946203,2.1775813467436,3.09456733151818,3.31727201358258,0.945810864637146,0.8858587585951,1.59454768657487,2.62181303545181,1.72684981865896,2.16973587872267,0,0,2.95058563811422,3.86311444826625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.534196811001766,0.162886959353576,4.45419332025846,0,3.39892890616974,3.93020624054176,2.45186603682668,1.77181135728464,1.53717573971964,1.55056975900933,2.18120237686503,1.06949213515416,3.47640433729398,1.05418608574999,1.03135543248187,0.340439605753788,1.08036656418786,1.03486947026204,1.92903331528433,0.177340233642274,0.713475270408282,0.987294123612726,0,3.28540391289194,4.44847348814022,5.95426674748397,2.4732937941222,2.74489525383039,3.98065304525829,4.17803204010978,3.44695889464629,2.62332752966866,0,0,0,0,0,0,0,0,0,0,4.77335309007557,1.89801596148681,2.64315307264903,2.80813886136683,5.22720740036172,3.9305261474312,4.04593039154462,2.31429676030941,3.14107130380836,3.6292192521702,3.10669656543463,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0.948033361884535,2.22997736819181,1.84879722896689,0.909445760844565,0.537080087002444,0.39736270956253,0.360586348559907,0.295379054349154,0.403865799792591,0.228620419965,0.504130925684203,0.487289403698762,0.481059208201647,0.116876902181569,4.0811469050738,4.43971906748129,1.34570784914214,4.7007692581942,6.76163579112667,2.25218970541418,8.42497471629419,7.5028932677673,13.5424468089548,0,0,0,0,0,0,0,0,0,0,0.830298780673413,0.399024873401031,0.170733605754134,0.729320151204882,0.419226325255965,0.735374033800057,1.11123363900808,2.06035057238894,0.962757628775446,1.26348605881899,0.760437899670719,2.07488975524684,1.03005658216871,1.21647789569252,0.976402972245426,1.42888107384922,1.39061191133827,0.964546102318525,2.06042950401653,1.61918812147837,0.685738504770831,1.24233064311536,0.476872379894642,0.581385666529314,0.941093804153306,0.761531471025089,0.914639864363863,0.526139422875686,1.08643291076689,0,0.830445126869219,1.0835493061312,1.63692417267876,0.929621047115796,1.35034627686799,1.24905288968973,0.935726433781634,0.644613162144895,0.382576664137687,0.661774257358546,0 | |||
|short_description=p2@Grhl2 | |||
}} |
Revision as of 05:30, 5 August 2015
Short description: | p2@Grhl2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Grhl2_5end |
Coexpression cluster: | NA |
Association with transcript: | 21bp_to_ENSMUST00000161532_5end |
EntrezGene: | 252973 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 8.24e-16 | 47 |
intestine | 1.37e-13 | 31 |
endoderm-derived structure | 1.93e-11 | 118 |
endoderm | 1.93e-11 | 118 |
presumptive endoderm | 1.93e-11 | 118 |
digestive system | 2.04e-10 | 116 |
digestive tract | 2.04e-10 | 116 |
primitive gut | 2.04e-10 | 116 |
subdivision of digestive tract | 5.63e-10 | 114 |
renal system | 1.21e-08 | 19 |
urinary system structure | 7.62e-08 | 18 |
mucosa | 8.02e-08 | 15 |
thoracic cavity element | 1.15e-07 | 17 |
thoracic segment organ | 1.15e-07 | 17 |
thoracic cavity | 1.15e-07 | 17 |
thoracic segment of trunk | 1.15e-07 | 17 |
respiratory primordium | 1.15e-07 | 17 |
endoderm of foregut | 1.15e-07 | 17 |
intestinal mucosa | 1.47e-07 | 13 |
wall of intestine | 1.47e-07 | 13 |
gastrointestinal system mucosa | 1.47e-07 | 13 |
epithelial bud | 2.75e-07 | 17 |
simple columnar epithelium | 3.51e-07 | 11 |