FFCP PHASE1:Mm9::chr7:48157988..48158007,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=491|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:48157988..48158007,+|id=chr7:48157988..48158007,+|ontology_enrichment_celltype=CL:0000117!1.48e-18!23;CL:0000337!1.48e-18!23;CL:0000540!1.41e-11!33;CL:0000047!1.41e-11!33;CL:0000031!1.41e-11!33;CL:0000404!1.41e-11!33;CL:0000393!3.86e-09!39;CL:0000211!3.86e-09!39;CL:0002319!6.62e-08!43;CL:0000221!1.24e-07!44;CL:0000133!1.24e-07!44;CL:0002610!3.12e-07!3;CL:0002614!8.56e-07!3|ontology_enrichment_celltype_v019_2=CL:0002610,2.89e-18,3;CL:0002614,5.56e-17,3;CL:0000117,1.64e-08,23;CL:0000337,1.64e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!3.61e-33!50;UBERON:0006238!3.61e-33!50;UBERON:0002616!1.30e-31!49;UBERON:0002020!1.34e-31!34;UBERON:0001049!1.40e-30!52;UBERON:0005068!1.40e-30!52;UBERON:0006241!1.40e-30!52;UBERON:0007135!1.40e-30!52;UBERON:0002791!8.81e-30!29;UBERON:0003528!8.81e-30!29;UBERON:0001893!8.81e-30!29;UBERON:0001017!4.45e-28!73;UBERON:0005743!4.45e-28!73;UBERON:0000033!5.48e-28!63;UBERON:0000073!4.59e-27!75;UBERON:0001016!4.59e-27!75;UBERON:0003080!1.04e-26!40;UBERON:0002780!4.93e-25!39;UBERON:0001890!4.93e-25!39;UBERON:0006240!4.93e-25!39;UBERON:0003056!5.19e-24!49;UBERON:0002346!4.76e-23!71;UBERON:0003075!4.76e-23!71;UBERON:0007284!4.76e-23!71;UBERON:0004121!9.84e-20!102;UBERON:0000924!9.84e-20!102;UBERON:0006601!9.84e-20!102;UBERON:0007811!5.16e-18!86;UBERON:0000956!1.04e-17!21;UBERON:0001869!1.04e-17!21;UBERON:0000203!1.04e-17!21;UBERON:0000153!1.07e-15!94;UBERON:0002619!7.66e-15!17;UBERON:0002420!1.03e-13!8;UBERON:0007245!1.03e-13!8;UBERON:0010009!1.03e-13!8;UBERON:0010011!1.03e-13!8;UBERON:0000454!1.03e-13!8;UBERON:0002021!1.53e-13!10;UBERON:0000411!1.53e-13!10;UBERON:0001950!1.53e-13!10;UBERON:0002298!4.53e-12!6;UBERON:0000025!2.95e-09!114;UBERON:0002950!1.10e-08!4;UBERON:0001891!1.10e-08!4;UBERON:0009616!1.10e-08!4;UBERON:0000369!1.55e-08!5;UBERON:0002435!1.55e-08!5;UBERON:0000204!1.55e-08!5;UBERON:0010082!1.55e-08!5;UBERON:0004111!4.07e-08!122;UBERON:0000064!2.37e-07!99;UBERON:0004684!3.12e-07!3;UBERON:0002275!3.12e-07!3;UBERON:0002038!8.56e-07!3;UBERON:0002308!8.56e-07!3;UBERON:0009663!8.56e-07!3;UBERON:0009661!8.56e-07!3;UBERON:0006331!8.56e-07!3;UBERON:0000125!8.56e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0002950,1.54e-22,4;UBERON:0001891,1.54e-22,4;UBERON:0009616,1.54e-22,4;UBERON:0010286,1.54e-22,4;UBERON:0000073,2.23e-21,54;UBERON:0004684,2.89e-18,3;UBERON:0002275,2.89e-18,3;UBERON:0001017,1.09e-17,73;UBERON:0001016,3.61e-17,75;UBERON:0002038,5.56e-17,3;UBERON:0009663,5.56e-17,3;UBERON:0009661,5.56e-17,3;UBERON:0000125,5.56e-17,3;UBERON:0002308,5.56e-17,3;UBERON:0001049,3.63e-16,52;UBERON:0005068,3.63e-16,52;UBERON:0006241,3.63e-16,52;UBERON:0007135,3.63e-16,52;UBERON:0002616,1.31e-15,46;UBERON:0000955,3.03e-15,47;UBERON:0006238,3.03e-15,47;UBERON:0004121,3.66e-13,95;UBERON:0000924,3.66e-13,95;UBERON:0006601,3.66e-13,95;UBERON:0002346,8.06e-13,64;UBERON:0003075,8.06e-13,64;UBERON:0007284,8.06e-13,64;UBERON:0003080,1.58e-12,40;UBERON:0001896,1.20e-11,2;UBERON:0002298,1.20e-11,2;UBERON:0005290,1.20e-11,2;UBERON:0010096,1.20e-11,2;UBERON:0010371,5.02e-11,73;UBERON:0002780,2.70e-10,39;UBERON:0001890,2.70e-10,39;UBERON:0006240,2.70e-10,39;UBERON:0003056,5.42e-10,49;UBERON:0003528,1.42e-08,29;UBERON:0002791,1.42e-08,29;UBERON:0001893,1.42e-08,29;UBERON:0010314,2.22e-08,92;UBERON:0002259,3.14e-07,1;UBERON:0002314,3.14e-07,1;UBERON:0004061,3.14e-07,1;UBERON:0006777,3.14e-07,1;UBERON:0005882,3.14e-07,1;UBERON:0002020,3.23e-07,34|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0,0,0.220868540951614,0.244981598429908,0.191690942036473,0,8.8092704799511,3.95830748064082,3.99376986466233,0.527545150920775,0.274462930807229,0.52091337055676,1.3959149950069,1.68828783009504,2.13917546887534,0.294628585473668,0.569486723196412,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.34392854273986,0.457500602818626,0.376963056338593,1.91206752211504,0.767146371990992,2.49345653471472,1.62241263067758,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60550589987792,1.40654023910644,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0.515559547031063,0.685082519770642,2.2661816921691,0.675022500231806,0.45032120322422,0.453142408984205,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0.377252682772152,0,0,0,0,0.115884325944855,0.38581844092741,0,0.147198920134397,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0.233931608445408,0,0,0,0.231867835620421|short_description=p@chr7:48157988..48158007,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=491 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:48157988..48158007,+ | |||
|description=CAGE_peak_at_chr7:48157988..48158007,+ | |||
|id=chr7:48157988..48158007,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.48e-18!23;CL:0000337!1.48e-18!23;CL:0000540!1.41e-11!33;CL:0000047!1.41e-11!33;CL:0000031!1.41e-11!33;CL:0000404!1.41e-11!33;CL:0000393!3.86e-09!39;CL:0000211!3.86e-09!39;CL:0002319!6.62e-08!43;CL:0000221!1.24e-07!44;CL:0000133!1.24e-07!44;CL:0002610!3.12e-07!3;CL:0002614!8.56e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,2.89e-18,3;CL:0002614,5.56e-17,3;CL:0000117,1.64e-08,23;CL:0000337,1.64e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!3.61e-33!50;UBERON:0006238!3.61e-33!50;UBERON:0002616!1.30e-31!49;UBERON:0002020!1.34e-31!34;UBERON:0001049!1.40e-30!52;UBERON:0005068!1.40e-30!52;UBERON:0006241!1.40e-30!52;UBERON:0007135!1.40e-30!52;UBERON:0002791!8.81e-30!29;UBERON:0003528!8.81e-30!29;UBERON:0001893!8.81e-30!29;UBERON:0001017!4.45e-28!73;UBERON:0005743!4.45e-28!73;UBERON:0000033!5.48e-28!63;UBERON:0000073!4.59e-27!75;UBERON:0001016!4.59e-27!75;UBERON:0003080!1.04e-26!40;UBERON:0002780!4.93e-25!39;UBERON:0001890!4.93e-25!39;UBERON:0006240!4.93e-25!39;UBERON:0003056!5.19e-24!49;UBERON:0002346!4.76e-23!71;UBERON:0003075!4.76e-23!71;UBERON:0007284!4.76e-23!71;UBERON:0004121!9.84e-20!102;UBERON:0000924!9.84e-20!102;UBERON:0006601!9.84e-20!102;UBERON:0007811!5.16e-18!86;UBERON:0000956!1.04e-17!21;UBERON:0001869!1.04e-17!21;UBERON:0000203!1.04e-17!21;UBERON:0000153!1.07e-15!94;UBERON:0002619!7.66e-15!17;UBERON:0002420!1.03e-13!8;UBERON:0007245!1.03e-13!8;UBERON:0010009!1.03e-13!8;UBERON:0010011!1.03e-13!8;UBERON:0000454!1.03e-13!8;UBERON:0002021!1.53e-13!10;UBERON:0000411!1.53e-13!10;UBERON:0001950!1.53e-13!10;UBERON:0002298!4.53e-12!6;UBERON:0000025!2.95e-09!114;UBERON:0002950!1.10e-08!4;UBERON:0001891!1.10e-08!4;UBERON:0009616!1.10e-08!4;UBERON:0000369!1.55e-08!5;UBERON:0002435!1.55e-08!5;UBERON:0000204!1.55e-08!5;UBERON:0010082!1.55e-08!5;UBERON:0004111!4.07e-08!122;UBERON:0000064!2.37e-07!99;UBERON:0004684!3.12e-07!3;UBERON:0002275!3.12e-07!3;UBERON:0002038!8.56e-07!3;UBERON:0002308!8.56e-07!3;UBERON:0009663!8.56e-07!3;UBERON:0009661!8.56e-07!3;UBERON:0006331!8.56e-07!3;UBERON:0000125!8.56e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002950,1.54e-22,4;UBERON:0001891,1.54e-22,4;UBERON:0009616,1.54e-22,4;UBERON:0010286,1.54e-22,4;UBERON:0000073,2.23e-21,54;UBERON:0004684,2.89e-18,3;UBERON:0002275,2.89e-18,3;UBERON:0001017,1.09e-17,73;UBERON:0001016,3.61e-17,75;UBERON:0002038,5.56e-17,3;UBERON:0009663,5.56e-17,3;UBERON:0009661,5.56e-17,3;UBERON:0000125,5.56e-17,3;UBERON:0002308,5.56e-17,3;UBERON:0001049,3.63e-16,52;UBERON:0005068,3.63e-16,52;UBERON:0006241,3.63e-16,52;UBERON:0007135,3.63e-16,52;UBERON:0002616,1.31e-15,46;UBERON:0000955,3.03e-15,47;UBERON:0006238,3.03e-15,47;UBERON:0004121,3.66e-13,95;UBERON:0000924,3.66e-13,95;UBERON:0006601,3.66e-13,95;UBERON:0002346,8.06e-13,64;UBERON:0003075,8.06e-13,64;UBERON:0007284,8.06e-13,64;UBERON:0003080,1.58e-12,40;UBERON:0001896,1.20e-11,2;UBERON:0002298,1.20e-11,2;UBERON:0005290,1.20e-11,2;UBERON:0010096,1.20e-11,2;UBERON:0010371,5.02e-11,73;UBERON:0002780,2.70e-10,39;UBERON:0001890,2.70e-10,39;UBERON:0006240,2.70e-10,39;UBERON:0003056,5.42e-10,49;UBERON:0003528,1.42e-08,29;UBERON:0002791,1.42e-08,29;UBERON:0001893,1.42e-08,29;UBERON:0010314,2.22e-08,92;UBERON:0002259,3.14e-07,1;UBERON:0002314,3.14e-07,1;UBERON:0004061,3.14e-07,1;UBERON:0006777,3.14e-07,1;UBERON:0005882,3.14e-07,1;UBERON:0002020,3.23e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0,0,0.220868540951614,0.244981598429908,0.191690942036473,0,8.8092704799511,3.95830748064082,3.99376986466233,0.527545150920775,0.274462930807229,0.52091337055676,1.3959149950069,1.68828783009504,2.13917546887534,0.294628585473668,0.569486723196412,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.34392854273986,0.457500602818626,0.376963056338593,1.91206752211504,0.767146371990992,2.49345653471472,1.62241263067758,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60550589987792,1.40654023910644,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0.515559547031063,0.685082519770642,2.2661816921691,0.675022500231806,0.45032120322422,0.453142408984205,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0.377252682772152,0,0,0,0,0.115884325944855,0.38581844092741,0,0.147198920134397,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0.233931608445408,0,0,0,0.231867835620421 | |||
|short_description=p@chr7:48157988..48158007,+ | |||
}} |
Latest revision as of 04:53, 5 August 2015
Short description: | p@chr7:48157988..48158007, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:48157988..48158007, + |
Coexpression cluster: | MCL_coexpression_mm9:491 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 2.89e-18 | 3 |
neuron of the substantia nigra | 5.56e-17 | 3 |
CNS neuron (sensu Vertebrata) | 1.64e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.64e-08 | 23 |