FFCP PHASE1:Mm9::chr6:124691137..124691146,-: Difference between revisions
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{{FFCP|EntrezGene=14790|HGNC=|MCL_coexpression_id=0|UniProt=O35127|association_with_transcript=-40bp_to_NM_013535,uc009drn.1,uc009drp.1_5end|description=CAGE_peak_4_at_Grcc10_5end|id=chr6:124691137..124691146,-|ontology_enrichment_celltype=CL:0000221!1.72e-09!44;CL:0000133!1.72e-09!44;CL:0002319!5.22e-09!43;CL:0000117!2.74e-08!23;CL:0000337!2.74e-08!23;CL:0000055!3.71e-07!50|ontology_enrichment_celltype_v019_2=CL:0000221,1.70e-12,44;CL:0000133,1.70e-12,44;CL:0002319,2.28e-11,43;CL:0002453,5.87e-10,8;CL:0000117,1.08e-09,23;CL:0000337,1.08e-09,23;CL:0000333,8.31e-08,10;CL:0000095,8.31e-08,10;CL:0000243,8.31e-08,10;CL:0000123,8.31e-08,10;CL:0000125,8.31e-08,10;CL:0000030,8.31e-08,10;CL:0000339,8.31e-08,10;CL:0002612,2.60e-07,3;CL:0002321,3.28e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.07e-21!52;UBERON:0005068!1.07e-21!52;UBERON:0006241!1.07e-21!52;UBERON:0007135!1.07e-21!52;UBERON:0001017!3.94e-21!73;UBERON:0005743!3.94e-21!73;UBERON:0000073!1.12e-20!75;UBERON:0001016!1.12e-20!75;UBERON:0002616!2.95e-19!49;UBERON:0002346!8.63e-19!71;UBERON:0003075!8.63e-19!71;UBERON:0007284!8.63e-19!71;UBERON:0000955!2.73e-18!50;UBERON:0006238!2.73e-18!50;UBERON:0000033!4.74e-17!63;UBERON:0002020!1.49e-16!34;UBERON:0004121!1.77e-16!102;UBERON:0000924!1.77e-16!102;UBERON:0006601!1.77e-16!102;UBERON:0003080!2.28e-16!40;UBERON:0002780!7.81e-16!39;UBERON:0001890!7.81e-16!39;UBERON:0006240!7.81e-16!39;UBERON:0003056!6.73e-15!49;UBERON:0002791!2.13e-13!29;UBERON:0003528!2.13e-13!29;UBERON:0001893!2.13e-13!29;UBERON:0000956!7.01e-12!21;UBERON:0001869!7.01e-12!21;UBERON:0000203!7.01e-12!21;UBERON:0002619!1.88e-10!17;UBERON:0007811!1.14e-07!86;UBERON:0002021!5.17e-07!10;UBERON:0000411!5.17e-07!10;UBERON:0001950!5.17e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.65e-24,34;UBERON:0001017,8.65e-21,73;UBERON:0001016,4.81e-20,75;UBERON:0000073,1.68e-19,54;UBERON:0001049,1.04e-18,52;UBERON:0005068,1.04e-18,52;UBERON:0006241,1.04e-18,52;UBERON:0007135,1.04e-18,52;UBERON:0002021,2.74e-16,10;UBERON:0000411,2.74e-16,10;UBERON:0001950,2.74e-16,10;UBERON:0002619,3.22e-16,17;UBERON:0003528,8.22e-16,29;UBERON:0002791,8.22e-16,29;UBERON:0001893,8.22e-16,29;UBERON:0004121,1.42e-15,95;UBERON:0000924,1.42e-15,95;UBERON:0006601,1.42e-15,95;UBERON:0000956,4.98e-15,21;UBERON:0001869,4.98e-15,21;UBERON:0000203,4.98e-15,21;UBERON:0002346,4.15e-14,64;UBERON:0003075,4.15e-14,64;UBERON:0007284,4.15e-14,64;UBERON:0003080,2.22e-13,40;UBERON:0010371,6.87e-13,73;UBERON:0002616,1.27e-12,46;UBERON:0002780,2.94e-12,39;UBERON:0001890,2.94e-12,39;UBERON:0006240,2.94e-12,39;UBERON:0000955,2.95e-12,47;UBERON:0006238,2.95e-12,47;UBERON:0001948,3.32e-11,5;UBERON:0002315,3.32e-11,5;UBERON:0003056,3.83e-10,49;UBERON:0002240,2.86e-09,6;UBERON:0005174,2.86e-09,6;UBERON:0001137,2.86e-09,6;UBERON:0010314,5.16e-09,92;UBERON:0002257,2.60e-07,3;UBERON:0000025,6.75e-07,114;UBERON:0004111,8.92e-07,122|phase1_expression=0.640595388419176,0,0,0.60492842261366,0,0,0,0,0,0,0,0,0,0.0874204024189974,0.333109761815663,0,0,0.315462165358238,0,0,2.46625541438102,0.297872853602656,0.261199789138935,0,0,0,0.430761996159075,0.430942465371778,0,0,0.443461021310609,0,0,0,0.288851619751275,0.831173226792462,1.42918549383658,0.418531630736908,0.7813353445238,0,0,0.683045484958446,0,0.125896817975577,0.101376931219515,0,0.782391344348039,1.52617609466313,1.09843091367236,0.972149495371417,1.25987779462826,4.31257693094915,0.167782606057736,0,0,0.257259436035947,0,0,0.606949382578793,2.11596391708813,0,1.0165335962074,0.889294796111139,1.3498495759221,0,0.7104801149461,2.09720077362883,4.2264013585371,1.55534418462716,0.810035629990144,0.420649922702764,1.99955689082663,1.32521124570968,0.979926393719632,0.766763768145891,1.83843757322004,1.10115880999389,0.510749352340751,0.614426133024974,0.527545150920775,1.09785172322892,0,0.558365998002762,2.8138130501584,0.45839474333043,1.47314292736834,1.28134512719193,1.67759501242771,0.151452386666368,0.226714680320357,0.579728977403356,0.860423876981386,0.679971333707751,0,0,0,0.280888840263504,0.340860645156116,0.259786004602869,0,1.26759077799012,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0.5709193985953,0,0.593768556259299,0.346970653532272,0.913396434936424,0.230615497256059,0.60289056221049,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0.585561594023094,0.628340120440365,0,0.11981512450592,0.599902730993408,0.254140454146129,1.04853447583376,0.915001205637253,1.25654352112864,0.869121600961382,1.27857728665165,0.83115217823824,0.811206315338788,0.101839363850316,0.373220911830279,1.0108910337347,0.210441855886474,0.780722657776222,0.919608417733892,0.180062129805349,0.452114453507145,0.136072998302656,0.12811372028485,0.281105173679186,0,0.215567992932842,0,0,0,0,0,0.205782136407943,0,0.702213187313235,0.772043721344145,0,0.414251545071004,0,0.180062061461015,0.473489471170421,0.196764231747404,0,0.697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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14790 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O35127 | |||
|association_with_transcript=-40bp_to_NM_013535,uc009drn.1,uc009drp.1_5end | |||
|cluster_id=chr6:124691137..124691146,- | |||
|description=CAGE_peak_4_at_Grcc10_5end | |||
|id=chr6:124691137..124691146,- | |||
|ontology_enrichment_celltype=CL:0000221!1.72e-09!44;CL:0000133!1.72e-09!44;CL:0002319!5.22e-09!43;CL:0000117!2.74e-08!23;CL:0000337!2.74e-08!23;CL:0000055!3.71e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.70e-12,44;CL:0000133,1.70e-12,44;CL:0002319,2.28e-11,43;CL:0002453,5.87e-10,8;CL:0000117,1.08e-09,23;CL:0000337,1.08e-09,23;CL:0000333,8.31e-08,10;CL:0000095,8.31e-08,10;CL:0000243,8.31e-08,10;CL:0000123,8.31e-08,10;CL:0000125,8.31e-08,10;CL:0000030,8.31e-08,10;CL:0000339,8.31e-08,10;CL:0002612,2.60e-07,3;CL:0002321,3.28e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.07e-21!52;UBERON:0005068!1.07e-21!52;UBERON:0006241!1.07e-21!52;UBERON:0007135!1.07e-21!52;UBERON:0001017!3.94e-21!73;UBERON:0005743!3.94e-21!73;UBERON:0000073!1.12e-20!75;UBERON:0001016!1.12e-20!75;UBERON:0002616!2.95e-19!49;UBERON:0002346!8.63e-19!71;UBERON:0003075!8.63e-19!71;UBERON:0007284!8.63e-19!71;UBERON:0000955!2.73e-18!50;UBERON:0006238!2.73e-18!50;UBERON:0000033!4.74e-17!63;UBERON:0002020!1.49e-16!34;UBERON:0004121!1.77e-16!102;UBERON:0000924!1.77e-16!102;UBERON:0006601!1.77e-16!102;UBERON:0003080!2.28e-16!40;UBERON:0002780!7.81e-16!39;UBERON:0001890!7.81e-16!39;UBERON:0006240!7.81e-16!39;UBERON:0003056!6.73e-15!49;UBERON:0002791!2.13e-13!29;UBERON:0003528!2.13e-13!29;UBERON:0001893!2.13e-13!29;UBERON:0000956!7.01e-12!21;UBERON:0001869!7.01e-12!21;UBERON:0000203!7.01e-12!21;UBERON:0002619!1.88e-10!17;UBERON:0007811!1.14e-07!86;UBERON:0002021!5.17e-07!10;UBERON:0000411!5.17e-07!10;UBERON:0001950!5.17e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.65e-24,34;UBERON:0001017,8.65e-21,73;UBERON:0001016,4.81e-20,75;UBERON:0000073,1.68e-19,54;UBERON:0001049,1.04e-18,52;UBERON:0005068,1.04e-18,52;UBERON:0006241,1.04e-18,52;UBERON:0007135,1.04e-18,52;UBERON:0002021,2.74e-16,10;UBERON:0000411,2.74e-16,10;UBERON:0001950,2.74e-16,10;UBERON:0002619,3.22e-16,17;UBERON:0003528,8.22e-16,29;UBERON:0002791,8.22e-16,29;UBERON:0001893,8.22e-16,29;UBERON:0004121,1.42e-15,95;UBERON:0000924,1.42e-15,95;UBERON:0006601,1.42e-15,95;UBERON:0000956,4.98e-15,21;UBERON:0001869,4.98e-15,21;UBERON:0000203,4.98e-15,21;UBERON:0002346,4.15e-14,64;UBERON:0003075,4.15e-14,64;UBERON:0007284,4.15e-14,64;UBERON:0003080,2.22e-13,40;UBERON:0010371,6.87e-13,73;UBERON:0002616,1.27e-12,46;UBERON:0002780,2.94e-12,39;UBERON:0001890,2.94e-12,39;UBERON:0006240,2.94e-12,39;UBERON:0000955,2.95e-12,47;UBERON:0006238,2.95e-12,47;UBERON:0001948,3.32e-11,5;UBERON:0002315,3.32e-11,5;UBERON:0003056,3.83e-10,49;UBERON:0002240,2.86e-09,6;UBERON:0005174,2.86e-09,6;UBERON:0001137,2.86e-09,6;UBERON:0010314,5.16e-09,92;UBERON:0002257,2.60e-07,3;UBERON:0000025,6.75e-07,114;UBERON:0004111,8.92e-07,122 | |||
|phase1_expression=0.640595388419176,0,0,0.60492842261366,0,0,0,0,0,0,0,0,0,0.0874204024189974,0.333109761815663,0,0,0.315462165358238,0,0,2.46625541438102,0.297872853602656,0.261199789138935,0,0,0,0.430761996159075,0.430942465371778,0,0,0.443461021310609,0,0,0,0.288851619751275,0.831173226792462,1.42918549383658,0.418531630736908,0.7813353445238,0,0,0.683045484958446,0,0.125896817975577,0.101376931219515,0,0.782391344348039,1.52617609466313,1.09843091367236,0.972149495371417,1.25987779462826,4.31257693094915,0.167782606057736,0,0,0.257259436035947,0,0,0.606949382578793,2.11596391708813,0,1.0165335962074,0.889294796111139,1.3498495759221,0,0.7104801149461,2.09720077362883,4.2264013585371,1.55534418462716,0.810035629990144,0.420649922702764,1.99955689082663,1.32521124570968,0.979926393719632,0.766763768145891,1.83843757322004,1.10115880999389,0.510749352340751,0.614426133024974,0.527545150920775,1.09785172322892,0,0.558365998002762,2.8138130501584,0.45839474333043,1.47314292736834,1.28134512719193,1.67759501242771,0.151452386666368,0.226714680320357,0.579728977403356,0.860423876981386,0.679971333707751,0,0,0,0.280888840263504,0.340860645156116,0.259786004602869,0,1.26759077799012,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0.5709193985953,0,0.593768556259299,0.346970653532272,0.913396434936424,0.230615497256059,0.60289056221049,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0.585561594023094,0.628340120440365,0,0.11981512450592,0.599902730993408,0.254140454146129,1.04853447583376,0.915001205637253,1.25654352112864,0.869121600961382,1.27857728665165,0.83115217823824,0.811206315338788,0.101839363850316,0.373220911830279,1.0108910337347,0.210441855886474,0.780722657776222,0.919608417733892,0.180062129805349,0.452114453507145,0.136072998302656,0.12811372028485,0.281105173679186,0,0.215567992932842,0,0,0,0,0,0.205782136407943,0,0.702213187313235,0.772043721344145,0,0.414251545071004,0,0.180062061461015,0.473489471170421,0.196764231747404,0,0.697601834251224,0,0,0.16455984991348,0,0.0810688095458557,0.146199987425332,0.219550115291051,0.134206418760372,1.89260953707715,0.823236899034275,0.660837565967596,0.264450566663544,0.213288250535234,0,0.257734922644187,0.403367049246685,0.667134131534611,0,0,0,0.251335208800269,0.596869416123452,0.19496408711912,0,0.432276099749388,0,0.569003702859245,0.456994050438915,0,0.407302655690628,0,0.0701358198903186,0,0.147610147979602,0.156998727841375,0.493588655687202,0.592905254174298,0,0.196558995113203,0.224862112384854,0.202860121388503,0.241177159752417,0,0,0,0,1.43768206527355,0.372140947668503,0,0.252578877947112,0.179397413521912,0,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0.167506257441816,0.238043640886014,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0.481651769963376,0.35163505977661,0.163934945376675,0.252470927204373,0.315508219416257,0,0,0.238968797952552,0,0.849229592366497,0,0,0.395287777946524,0,0.283880170416537,0.534196811001766,0,0,0,0.728341908464944,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0.680879211507576,0.540183282093931,0.517434735131018,1.07168517515796,0.354680467284547,0.713475270408282,0.164549020602121,0.913394847343798,0,0.63549621259146,0,0.16488625294148,0.161464426695906,0.0603129249281559,0,0,0.291480836629851,0.556275906031529,0.170870880797853,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0,0.169978429993855,0.139951452323658,0.138199973804424,0,0,0.406638934253697,0.108005340821801,0.418176592028937,0.218362563746178,0.539457385539283,0,0.26175594198403,0.129614973291793,0,12.4012446510522,0,0.330916980914195,0.388902376688095,0.387479470433193,0,0.117357238645754,0,0.104859344425711,0.241584120826006,6.04863013141517,0.316011120628178,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0.240390899039938,0,0,0,0,0.194915761479505,0,0.116876902181569,0.226730383615211,0,0.0897138566094757,0,0.19318959403219,0.187682475451182,0.36630324853453,0.214368379079066,0.501572104035363,1.6942555278512,2.76195141904306,1.14579102687879,1.03111909406213,0.685082519770642,1.5107877947794,2.02506750069542,1.35096360967266,1.35942722695261,1.03552062350364,0.31136204275253,0.399024873401031,0.341467211508268,0.486213434136588,0.209613162627982,0,0.222246727801615,0.618105171716683,0,1.01078884705519,0.25347929989024,0,0.468207537349412,0.128050304809739,0.459483751644906,0,0.115884325944855,0.38581844092741,0.412085900803307,0.294397840268795,0.685738504770831,0.177475806159338,0.476872379894642,0.145346416632329,0.282328141245992,0.25384382367503,0.548783918618318,0.526139422875686,0,0,0.593175090620871,0,0.818462086339379,0.464810523557898,0.385813221962283,1.24905288968973,0.233931608445408,0,0,0,0 | |||
|short_description=p4@Grcc10 | |||
}} |
Revision as of 03:09, 5 August 2015
Short description: | p4@Grcc10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Grcc10_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -40bp_to_NM_013535, uc009drn.1, uc009drp.1_5end |
EntrezGene: | 14790 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.70e-12 | 44 |
neurectodermal cell | 1.70e-12 | 44 |
neural cell | 2.28e-11 | 43 |
oligodendrocyte precursor cell | 5.87e-10 | 8 |
CNS neuron (sensu Vertebrata) | 1.08e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.08e-09 | 23 |
migratory neural crest cell | 8.31e-08 | 10 |
neuron associated cell | 8.31e-08 | 10 |
glial cell (sensu Vertebrata) | 8.31e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 8.31e-08 | 10 |
glial cell | 8.31e-08 | 10 |
glioblast | 8.31e-08 | 10 |
glioblast (sensu Vertebrata) | 8.31e-08 | 10 |
neuron of the ventral spinal cord | 2.60e-07 | 3 |
embryonic cell | 3.28e-07 | 70 |