FFCP PHASE1:Mm9::chr2:34924785..34924801,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=73|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:34924785..34924801,-|id=chr2:34924785..34924801,-|ontology_enrichment_celltype=CL:0000181!5.02e-10!5;CL:0000417!5.02e-10!5;CL:0000668!5.02e-10!5;CL:0000412!5.02e-10!5;CL:0000182!5.02e-10!5|ontology_enrichment_celltype_v019_2=CL:0000182,1.82e-26,5;CL:0000223,7.53e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!4.64e-16!22;UBERON:0007499!4.64e-16!22;UBERON:0006925!4.64e-16!22;UBERON:0009497!4.64e-16!22;UBERON:0000015!4.64e-16!22;UBERON:0002423!4.64e-16!22;UBERON:0006235!4.64e-16!22;UBERON:0008835!4.64e-16!22;UBERON:0003894!4.64e-16!22;UBERON:0004161!4.64e-16!22;UBERON:0008836!4.64e-16!22;UBERON:0009569!8.13e-16!66;UBERON:0009854!3.00e-15!23;UBERON:0009856!3.00e-15!23;UBERON:0002048!6.19e-15!14;UBERON:0000117!6.19e-15!14;UBERON:0000171!6.19e-15!14;UBERON:0000170!6.19e-15!14;UBERON:0005597!6.19e-15!14;UBERON:0000118!6.19e-15!14;UBERON:0005911!6.64e-15!69;UBERON:0002365!8.03e-14!25;UBERON:0002330!8.03e-14!25;UBERON:0005153!5.34e-12!17;UBERON:0005178!5.34e-12!17;UBERON:0005181!5.34e-12!17;UBERON:0002224!5.34e-12!17;UBERON:0000915!5.34e-12!17;UBERON:0008947!5.34e-12!17;UBERON:0003258!5.34e-12!17;UBERON:0005177!3.59e-11!85;UBERON:0000466!3.67e-11!79;UBERON:0000077!3.16e-10!97;UBERON:0001041!6.10e-10!92;UBERON:0002100!4.88e-09!98;UBERON:0005157!1.82e-08!27;UBERON:0005256!2.78e-07!47;UBERON:0005172!7.07e-07!49;UBERON:0005173!7.07e-07!49;UBERON:0002417!7.07e-07!49;UBERON:0000916!7.07e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.90e-13,22;UBERON:0007499,5.90e-13,22;UBERON:0006925,5.90e-13,22;UBERON:0009497,5.90e-13,22;UBERON:0000015,5.90e-13,22;UBERON:0002423,5.90e-13,22;UBERON:0006235,5.90e-13,22;UBERON:0008835,5.90e-13,22;UBERON:0003894,5.90e-13,22;UBERON:0004161,5.90e-13,22;UBERON:0008836,5.90e-13,22;UBERON:0009854,2.19e-12,23;UBERON:0009856,2.19e-12,23;UBERON:0009569,1.84e-11,66;UBERON:0002365,2.21e-11,25;UBERON:0002330,2.21e-11,25;UBERON:0005911,6.23e-11,69;UBERON:0002048,1.76e-09,14;UBERON:0000117,1.76e-09,14;UBERON:0000171,1.76e-09,14;UBERON:0000170,1.76e-09,14;UBERON:0005597,1.76e-09,14;UBERON:0000118,1.76e-09,14;UBERON:0005177,1.88e-09,79;UBERON:0001041,2.53e-09,80;UBERON:0002100,3.38e-08,90;UBERON:0005153,7.43e-08,17;UBERON:0005178,7.43e-08,17;UBERON:0005181,7.43e-08,17;UBERON:0002224,7.43e-08,17;UBERON:0000915,7.43e-08,17;UBERON:0008947,7.43e-08,17;UBERON:0003258,7.43e-08,17|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03991400112325,64.7643829965381,3.24888208723835,2.24013443548668,2.10666630197628,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405720242777006,0.241177159752417,0.25462585178142,0,0.972811360650212,1.09824565275233,0,0.372140947668503,0,0,1.07638448113147,0.482443521363367,2.21703828199926,0,0,0,0,0,0.476087281772027,0.585400943573396,0.315270288212382,0.44292937929755,0.637819074629948,1.47476983244164,2.07221978239075,2.89298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0,0,0,0,0,0,0,0,0,0.476293691283074,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p@chr2:34924785..34924801,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=73 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:34924785..34924801,- | |||
|description=CAGE_peak_at_chr2:34924785..34924801,- | |||
|id=chr2:34924785..34924801,- | |||
|ontology_enrichment_celltype=CL:0000181!5.02e-10!5;CL:0000417!5.02e-10!5;CL:0000668!5.02e-10!5;CL:0000412!5.02e-10!5;CL:0000182!5.02e-10!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.82e-26,5;CL:0000223,7.53e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.64e-16!22;UBERON:0007499!4.64e-16!22;UBERON:0006925!4.64e-16!22;UBERON:0009497!4.64e-16!22;UBERON:0000015!4.64e-16!22;UBERON:0002423!4.64e-16!22;UBERON:0006235!4.64e-16!22;UBERON:0008835!4.64e-16!22;UBERON:0003894!4.64e-16!22;UBERON:0004161!4.64e-16!22;UBERON:0008836!4.64e-16!22;UBERON:0009569!8.13e-16!66;UBERON:0009854!3.00e-15!23;UBERON:0009856!3.00e-15!23;UBERON:0002048!6.19e-15!14;UBERON:0000117!6.19e-15!14;UBERON:0000171!6.19e-15!14;UBERON:0000170!6.19e-15!14;UBERON:0005597!6.19e-15!14;UBERON:0000118!6.19e-15!14;UBERON:0005911!6.64e-15!69;UBERON:0002365!8.03e-14!25;UBERON:0002330!8.03e-14!25;UBERON:0005153!5.34e-12!17;UBERON:0005178!5.34e-12!17;UBERON:0005181!5.34e-12!17;UBERON:0002224!5.34e-12!17;UBERON:0000915!5.34e-12!17;UBERON:0008947!5.34e-12!17;UBERON:0003258!5.34e-12!17;UBERON:0005177!3.59e-11!85;UBERON:0000466!3.67e-11!79;UBERON:0000077!3.16e-10!97;UBERON:0001041!6.10e-10!92;UBERON:0002100!4.88e-09!98;UBERON:0005157!1.82e-08!27;UBERON:0005256!2.78e-07!47;UBERON:0005172!7.07e-07!49;UBERON:0005173!7.07e-07!49;UBERON:0002417!7.07e-07!49;UBERON:0000916!7.07e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.90e-13,22;UBERON:0007499,5.90e-13,22;UBERON:0006925,5.90e-13,22;UBERON:0009497,5.90e-13,22;UBERON:0000015,5.90e-13,22;UBERON:0002423,5.90e-13,22;UBERON:0006235,5.90e-13,22;UBERON:0008835,5.90e-13,22;UBERON:0003894,5.90e-13,22;UBERON:0004161,5.90e-13,22;UBERON:0008836,5.90e-13,22;UBERON:0009854,2.19e-12,23;UBERON:0009856,2.19e-12,23;UBERON:0009569,1.84e-11,66;UBERON:0002365,2.21e-11,25;UBERON:0002330,2.21e-11,25;UBERON:0005911,6.23e-11,69;UBERON:0002048,1.76e-09,14;UBERON:0000117,1.76e-09,14;UBERON:0000171,1.76e-09,14;UBERON:0000170,1.76e-09,14;UBERON:0005597,1.76e-09,14;UBERON:0000118,1.76e-09,14;UBERON:0005177,1.88e-09,79;UBERON:0001041,2.53e-09,80;UBERON:0002100,3.38e-08,90;UBERON:0005153,7.43e-08,17;UBERON:0005178,7.43e-08,17;UBERON:0005181,7.43e-08,17;UBERON:0002224,7.43e-08,17;UBERON:0000915,7.43e-08,17;UBERON:0008947,7.43e-08,17;UBERON:0003258,7.43e-08,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03991400112325,64.7643829965381,3.24888208723835,2.24013443548668,2.10666630197628,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405720242777006,0.241177159752417,0.25462585178142,0,0.972811360650212,1.09824565275233,0,0.372140947668503,0,0,1.07638448113147,0.482443521363367,2.21703828199926,0,0,0,0,0,0.476087281772027,0.585400943573396,0.315270288212382,0.44292937929755,0.637819074629948,1.47476983244164,2.07221978239075,2.89298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0,0,0,0,0,0,0,0,0,0.476293691283074,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr2:34924785..34924801,- | |||
}} |
Latest revision as of 02:53, 5 August 2015
Short description: | p@chr2:34924785..34924801, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:34924785..34924801, - |
Coexpression cluster: | MCL_coexpression_mm9:73 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.82e-26 | 5 |
endodermal cell | 7.53e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
liver | 5.90e-13 | 22 |
epithelial sac | 5.90e-13 | 22 |
digestive gland | 5.90e-13 | 22 |
epithelium of foregut-midgut junction | 5.90e-13 | 22 |
anatomical boundary | 5.90e-13 | 22 |
hepatobiliary system | 5.90e-13 | 22 |
foregut-midgut junction | 5.90e-13 | 22 |
hepatic diverticulum | 5.90e-13 | 22 |
liver primordium | 5.90e-13 | 22 |
septum transversum | 5.90e-13 | 22 |
liver bud | 5.90e-13 | 22 |
digestive tract diverticulum | 2.19e-12 | 23 |
sac | 2.19e-12 | 23 |
subdivision of trunk | 1.84e-11 | 66 |
exocrine gland | 2.21e-11 | 25 |
exocrine system | 2.21e-11 | 25 |
endo-epithelium | 6.23e-11 | 69 |
lung | 1.76e-09 | 14 |
respiratory tube | 1.76e-09 | 14 |
respiration organ | 1.76e-09 | 14 |
pair of lungs | 1.76e-09 | 14 |
lung primordium | 1.76e-09 | 14 |
lung bud | 1.76e-09 | 14 |
trunk region element | 1.88e-09 | 79 |
foregut | 2.53e-09 | 80 |
trunk | 3.38e-08 | 90 |
epithelial bud | 7.43e-08 | 17 |
thoracic cavity element | 7.43e-08 | 17 |
thoracic segment organ | 7.43e-08 | 17 |
thoracic cavity | 7.43e-08 | 17 |
thoracic segment of trunk | 7.43e-08 | 17 |
respiratory primordium | 7.43e-08 | 17 |
endoderm of foregut | 7.43e-08 | 17 |