FFCP PHASE1:Mm9::chr6:122552422..122552440,-: Difference between revisions
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{{FFCP|EntrezGene=11810|HGNC=|MCL_coexpression_id=67|UniProt=P51908,Q3U9G8|association_with_transcript=21bp_to_ENSMUST00000112586,NM_001134391,NM_031159,uc009dpk.1,uc009dpl.1_5end|description=CAGE_peak_3_at_Apobec1_5end|id=chr6:122552422..122552440,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!6.13e-17!193;UBERON:0004120!6.13e-17!193;UBERON:0006603!6.13e-17!193;UBERON:0009569!3.37e-11!66;UBERON:0003104!6.03e-11!131;UBERON:0009142!6.03e-11!131;UBERON:0002405!1.97e-10!70;UBERON:0005256!1.19e-09!47;UBERON:0002100!2.06e-09!98;UBERON:0002204!2.39e-09!32;UBERON:0005172!4.91e-08!49;UBERON:0005173!4.91e-08!49;UBERON:0002417!4.91e-08!49;UBERON:0000916!4.91e-08!49;UBERON:0002365!6.20e-08!25;UBERON:0002330!6.20e-08!25;UBERON:0003914!8.06e-08!47;UBERON:0000466!1.28e-07!79;UBERON:0005177!2.52e-07!85;UBERON:0002107!4.47e-07!22;UBERON:0007499!4.47e-07!22;UBERON:0006925!4.47e-07!22;UBERON:0009497!4.47e-07!22;UBERON:0000015!4.47e-07!22;UBERON:0002423!4.47e-07!22;UBERON:0006235!4.47e-07!22;UBERON:0008835!4.47e-07!22;UBERON:0003894!4.47e-07!22;UBERON:0004161!4.47e-07!22;UBERON:0008836!4.47e-07!22;UBERON:0003081!5.51e-07!88;UBERON:0000077!5.59e-07!97;UBERON:0001474!6.02e-07!22;UBERON:0004765!6.02e-07!22;UBERON:0001434!6.02e-07!22;UBERON:0001041!6.49e-07!92|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.65e-11,90;UBERON:0009569,2.92e-11,66;UBERON:0001041,2.33e-10,80;UBERON:0002204,2.84e-10,32;UBERON:0005256,1.47e-09,45;UBERON:0005177,2.20e-09,79;UBERON:0003104,8.91e-09,61;UBERON:0009142,8.91e-09,61;UBERON:0002365,1.54e-08,25;UBERON:0002330,1.54e-08,25;UBERON:0005172,5.27e-08,49;UBERON:0005173,5.27e-08,49;UBERON:0002417,5.27e-08,49;UBERON:0000916,5.27e-08,49;UBERON:0001474,6.68e-08,22;UBERON:0004765,6.68e-08,22;UBERON:0001434,6.68e-08,22;UBERON:0000926,7.55e-08,120;UBERON:0004120,7.55e-08,120;UBERON:0006603,7.55e-08,120;UBERON:0001048,1.45e-07,134;UBERON:0002107,1.56e-07,22;UBERON:0007499,1.56e-07,22;UBERON:0006925,1.56e-07,22;UBERON:0009497,1.56e-07,22;UBERON:0000015,1.56e-07,22;UBERON:0002423,1.56e-07,22;UBERON:0006235,1.56e-07,22;UBERON:0008835,1.56e-07,22;UBERON:0003894,1.56e-07,22;UBERON:0004161,1.56e-07,22;UBERON:0008836,1.56e-07,22;UBERON:0003081,2.04e-07,87;UBERON:0003914,2.07e-07,47;UBERON:0002371,4.41e-07,16;UBERON:0009854,7.02e-07,23;UBERON:0009856,7.02e-07,23|phase1_expression=0.80074423552397,1.04692622291808,0.909998478779072,0.60492842261366,0,2.18243053485457,0.700837921786577,0.645616617207881,0.281577444303333,0,0.34243593645101,0,0.171200729931206,0.262261207256992,1.99865857089398,2.83465374345756,9.09430441566591,5.67831897644828,4.2505474417779,2.97072756258621,0.935476191661768,0.695036658406197,0.261199789138935,0.639969691173627,1.60586496747019,1.14846392823004,1.29228598847722,1.29282739611533,0.190023419456374,0,0.443461021310609,0,0,0,0.866554859253824,0.332469290716985,0.816677425049476,12.1374172913703,12.5013655123808,9.94695113550217,26.4704169613956,18.442228093878,13.1087795318411,1.25896817975577,0.912392380975631,2.56965453026354,0,0,0.439372365468944,0,0,0,3.02008690903925,0,0,1.02903774414379,2.86533439938757,2.57836046138721,0,0,0,0,0,13.0485459005803,27.6882581518753,19.1829631035447,5.69240209984969,3.45796474789399,0.518448061542388,0.540023753326763,1.05162480675691,0.285650984403804,0.662605622854841,0.489963196859816,0,0,1.10115880999389,0.510749352340751,0.307213066512487,0,0,0,0,0.56276261003168,0.30559649555362,0,0.427115042397309,0.745597783301202,0.454357159999104,0.831287161174641,6.37701875143691,7.74381489283248,16.9992833426938,2.69851595818909,6.49776417447669,9.85659151614138,1.68533304158102,2.21559419351475,1.03914401841148,0.70667914902068,1.40843419776681,1.28326477414318,2.54805239706646,0,7.14420435337007,5.32055717497707,5.56076889516262,2.74041311325744,20.4560928081266,6.23456984072264,1.21439728736295,0.608930956624282,0.922461989024234,1.50722640552623,1.05829836422134,1.75933227861546,0.247194967734374,3.61498392299779,2.65383165584962,2.10296904931632,6.18356251689102,5.81850303762267,0,0.292780797011547,1.46612694769419,1.78819938646014,0.718890747035522,0.599902730993408,1.65191295194984,0.599162557619291,0.457500602818626,0.251308704225729,0.695297280769106,0.767146371990992,1.0389402227978,0.811206315338788,0.712875546952214,7.2156042953854,2.27450482590307,3.78795340595653,0.260240885925407,0.459804208866946,0,0.753524089178575,0.884474488967262,0.512454881139399,0.562210347358373,1.81092359517311,0,0,0.527853372491847,0.876782929710299,0.834141747676794,1.39300866608867,1.23469281844766,0.199034266818493,0,0.51469581422943,2.84163499395593,0,0.703578179943289,0.36012412292203,0.710234206755631,0.983821158737019,1.69693824176116,1.39520366850245,0.804820204198858,1.28441876603886,2.46839774870221,3.2833492815819,2.75633952455909,1.75439984910399,3.95190207523891,4.42881181909227,0,0.514523061896422,3.96502539580558,0,0.4265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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:11810 | |||
|HGNC= | |||
|MCL_coexpression_id=67 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P51908,uniprot:Q3U9G8 | |||
|association_with_transcript=21bp_to_ENSMUST00000112586,NM_001134391,NM_031159,uc009dpk.1,uc009dpl.1_5end | |||
|cluster_id=chr6:122552422..122552440,- | |||
|description=CAGE_peak_3_at_Apobec1_5end | |||
|id=chr6:122552422..122552440,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!6.13e-17!193;UBERON:0004120!6.13e-17!193;UBERON:0006603!6.13e-17!193;UBERON:0009569!3.37e-11!66;UBERON:0003104!6.03e-11!131;UBERON:0009142!6.03e-11!131;UBERON:0002405!1.97e-10!70;UBERON:0005256!1.19e-09!47;UBERON:0002100!2.06e-09!98;UBERON:0002204!2.39e-09!32;UBERON:0005172!4.91e-08!49;UBERON:0005173!4.91e-08!49;UBERON:0002417!4.91e-08!49;UBERON:0000916!4.91e-08!49;UBERON:0002365!6.20e-08!25;UBERON:0002330!6.20e-08!25;UBERON:0003914!8.06e-08!47;UBERON:0000466!1.28e-07!79;UBERON:0005177!2.52e-07!85;UBERON:0002107!4.47e-07!22;UBERON:0007499!4.47e-07!22;UBERON:0006925!4.47e-07!22;UBERON:0009497!4.47e-07!22;UBERON:0000015!4.47e-07!22;UBERON:0002423!4.47e-07!22;UBERON:0006235!4.47e-07!22;UBERON:0008835!4.47e-07!22;UBERON:0003894!4.47e-07!22;UBERON:0004161!4.47e-07!22;UBERON:0008836!4.47e-07!22;UBERON:0003081!5.51e-07!88;UBERON:0000077!5.59e-07!97;UBERON:0001474!6.02e-07!22;UBERON:0004765!6.02e-07!22;UBERON:0001434!6.02e-07!22;UBERON:0001041!6.49e-07!92 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.65e-11,90;UBERON:0009569,2.92e-11,66;UBERON:0001041,2.33e-10,80;UBERON:0002204,2.84e-10,32;UBERON:0005256,1.47e-09,45;UBERON:0005177,2.20e-09,79;UBERON:0003104,8.91e-09,61;UBERON:0009142,8.91e-09,61;UBERON:0002365,1.54e-08,25;UBERON:0002330,1.54e-08,25;UBERON:0005172,5.27e-08,49;UBERON:0005173,5.27e-08,49;UBERON:0002417,5.27e-08,49;UBERON:0000916,5.27e-08,49;UBERON:0001474,6.68e-08,22;UBERON:0004765,6.68e-08,22;UBERON:0001434,6.68e-08,22;UBERON:0000926,7.55e-08,120;UBERON:0004120,7.55e-08,120;UBERON:0006603,7.55e-08,120;UBERON:0001048,1.45e-07,134;UBERON:0002107,1.56e-07,22;UBERON:0007499,1.56e-07,22;UBERON:0006925,1.56e-07,22;UBERON:0009497,1.56e-07,22;UBERON:0000015,1.56e-07,22;UBERON:0002423,1.56e-07,22;UBERON:0006235,1.56e-07,22;UBERON:0008835,1.56e-07,22;UBERON:0003894,1.56e-07,22;UBERON:0004161,1.56e-07,22;UBERON:0008836,1.56e-07,22;UBERON:0003081,2.04e-07,87;UBERON:0003914,2.07e-07,47;UBERON:0002371,4.41e-07,16;UBERON:0009854,7.02e-07,23;UBERON:0009856,7.02e-07,23 | |||
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| |||
|short_description=p3@Apobec1 | |||
}} |
Revision as of 01:52, 5 August 2015
Short description: | p3@Apobec1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Apobec1_5end |
Coexpression cluster: | MCL_coexpression_mm9:67 |
Association with transcript: | 21bp_to_ENSMUST00000112586, NM_001134391, NM_031159, uc009dpk.1, uc009dpl.1_5end |
EntrezGene: | 11810 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data