FFCP PHASE1:Mm9::chr6:122436270..122436322,-: Difference between revisions
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{{FFCP|EntrezGene=108653|HGNC=|MCL_coexpression_id=2275|UniProt=Q80WS1|association_with_transcript=0bp_to_NM_027664,uc009dpg.1_5end|description=CAGE_peak_5_at_Rimklb_5end|id=chr6:122436270..122436322,-|ontology_enrichment_celltype=CL:0000117!5.61e-16!23;CL:0000337!5.61e-16!23;CL:0000540!2.52e-12!33;CL:0000047!2.52e-12!33;CL:0000031!2.52e-12!33;CL:0000404!2.52e-12!33;CL:0000221!4.88e-11!44;CL:0000133!4.88e-11!44;CL:0002319!1.83e-10!43;CL:0000393!2.15e-08!39;CL:0000211!2.15e-08!39;CL:0000055!4.75e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.02e-26,23;CL:0000337,1.02e-26,23;CL:0000540,5.56e-18,33;CL:0000047,5.56e-18,33;CL:0000031,5.56e-18,33;CL:0000404,5.56e-18,33;CL:0000393,5.16e-14,39;CL:0000211,5.16e-14,39;CL:0000221,6.99e-13,44;CL:0000133,6.99e-13,44;CL:0002319,5.24e-12,43;CL:0002609,7.78e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.37e-23!63;UBERON:0001017!7.65e-22!73;UBERON:0005743!7.65e-22!73;UBERON:0002346!8.30e-22!71;UBERON:0003075!8.30e-22!71;UBERON:0007284!8.30e-22!71;UBERON:0001049!1.60e-21!52;UBERON:0005068!1.60e-21!52;UBERON:0006241!1.60e-21!52;UBERON:0007135!1.60e-21!52;UBERON:0000073!3.98e-21!75;UBERON:0001016!3.98e-21!75;UBERON:0003056!6.73e-21!49;UBERON:0004121!4.77e-19!102;UBERON:0000924!4.77e-19!102;UBERON:0006601!4.77e-19!102;UBERON:0000955!7.30e-19!50;UBERON:0006238!7.30e-19!50;UBERON:0002616!1.14e-18!49;UBERON:0002020!3.68e-16!34;UBERON:0003080!4.99e-16!40;UBERON:0002780!1.85e-15!39;UBERON:0001890!1.85e-15!39;UBERON:0006240!1.85e-15!39;UBERON:0000153!8.97e-14!94;UBERON:0007811!3.15e-13!86;UBERON:0002791!1.52e-12!29;UBERON:0003528!1.52e-12!29;UBERON:0001893!1.52e-12!29;UBERON:0000956!4.06e-09!21;UBERON:0001869!4.06e-09!21;UBERON:0000203!4.06e-09!21;UBERON:0002619!3.44e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.96e-21,64;UBERON:0003075,4.96e-21,64;UBERON:0007284,4.96e-21,64;UBERON:0010371,1.52e-19,73;UBERON:0002020,5.64e-19,34;UBERON:0003056,1.18e-18,49;UBERON:0000073,1.76e-18,54;UBERON:0004121,2.59e-18,95;UBERON:0000924,2.59e-18,95;UBERON:0006601,2.59e-18,95;UBERON:0001049,3.95e-17,52;UBERON:0005068,3.95e-17,52;UBERON:0006241,3.95e-17,52;UBERON:0007135,3.95e-17,52;UBERON:0001017,1.08e-16,73;UBERON:0001016,6.23e-16,75;UBERON:0003528,2.32e-13,29;UBERON:0002791,2.32e-13,29;UBERON:0001893,2.32e-13,29;UBERON:0003080,2.32e-13,40;UBERON:0010314,5.98e-13,92;UBERON:0002780,1.46e-12,39;UBERON:0001890,1.46e-12,39;UBERON:0006240,1.46e-12,39;UBERON:0002616,1.35e-11,46;UBERON:0000955,3.46e-11,47;UBERON:0006238,3.46e-11,47;UBERON:0002240,1.40e-08,6;UBERON:0005174,1.40e-08,6;UBERON:0001137,1.40e-08,6;UBERON:0001948,7.88e-08,5;UBERON:0002315,7.88e-08,5;UBERON:0002420,9.77e-08,8;UBERON:0007245,9.77e-08,8;UBERON:0010009,9.77e-08,8;UBERON:0010011,9.77e-08,8;UBERON:0000454,9.77e-08,8;UBERON:0000020,1.20e-07,12;UBERON:0001032,1.20e-07,12;UBERON:0004456,1.20e-07,12;UBERON:0000956,1.37e-07,21;UBERON:0001869,1.37e-07,21;UBERON:0000203,1.37e-07,21;UBERON:0000033,6.88e-07,13;UBERON:0005085,6.88e-07,13|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08207792725135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.436050312760893,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,10.3181395038395,8.99284664762456,5.07065122804943,0,0,0,0,0,0.299600110518405,0.384218305321555,2.38486108309499,2.70011876663381,1.68259969081106,5.99867067247988,7.95126747425809,2.69479758272899,4.50473713785711,3.67687514644008,1.10115880999389,1.78762273319263,1.22885226604995,12.924856197559,14.6380229763855,15.106487746146,1.67509799400829,1.12552522006336,1.83357897332172,5.89257170947335,7.83044244395066,9.13357284543973,0.227178579999552,0,0,0,0,0,0,0,0.280888840263504,0,0,0,3.80277233397037,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0.230615497256059,0,0.117588707135705,0,0.494389935468748,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,1.79748767285787,0,4.14659361972453,0.869121600961382,1.79000820131231,1.24672826735736,0.648965052271031,0.916554274652847,0,0,0.420883711772948,2.08192708740326,1.60931473103431,2.16074555766419,2.71268672104287,3.94611695077702,4.35586648968489,3.46696380870997,0.776110112217047,0.646703978798527,1.13463648100692,1.23165786914764,0.876782929710299,0.278047249225598,0,0.205782136407943,0.59710280045548,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0.393528463494808,0,0.232533944750408,0,0,0,0,0.0810688095458557,0,0,0,0.420579897128254,4.52780294468852,0,0,0.853153002140936,0.928946687441754,0.128867461322093,0.201683524623343,0.22237804384487,0,0.474529061544512,0,0,0,0,0,0,0,0,0.685491075658373,1.1270773567308,0.407302655690628,0.193952487167626,0.350679099451593,0.126473074248515,0,0,0,0,0.333690211432188,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0.678980343100753,0.234690248288502,0,0,0,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,1.12385412991454,0.703270119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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:108653 | |||
|HGNC= | |||
|MCL_coexpression_id=2275 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q80WS1 | |||
|association_with_transcript=0bp_to_NM_027664,uc009dpg.1_5end | |||
|cluster_id=chr6:122436270..122436322,- | |||
|description=CAGE_peak_5_at_Rimklb_5end | |||
|id=chr6:122436270..122436322,- | |||
|ontology_enrichment_celltype=CL:0000117!5.61e-16!23;CL:0000337!5.61e-16!23;CL:0000540!2.52e-12!33;CL:0000047!2.52e-12!33;CL:0000031!2.52e-12!33;CL:0000404!2.52e-12!33;CL:0000221!4.88e-11!44;CL:0000133!4.88e-11!44;CL:0002319!1.83e-10!43;CL:0000393!2.15e-08!39;CL:0000211!2.15e-08!39;CL:0000055!4.75e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.02e-26,23;CL:0000337,1.02e-26,23;CL:0000540,5.56e-18,33;CL:0000047,5.56e-18,33;CL:0000031,5.56e-18,33;CL:0000404,5.56e-18,33;CL:0000393,5.16e-14,39;CL:0000211,5.16e-14,39;CL:0000221,6.99e-13,44;CL:0000133,6.99e-13,44;CL:0002319,5.24e-12,43;CL:0002609,7.78e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.37e-23!63;UBERON:0001017!7.65e-22!73;UBERON:0005743!7.65e-22!73;UBERON:0002346!8.30e-22!71;UBERON:0003075!8.30e-22!71;UBERON:0007284!8.30e-22!71;UBERON:0001049!1.60e-21!52;UBERON:0005068!1.60e-21!52;UBERON:0006241!1.60e-21!52;UBERON:0007135!1.60e-21!52;UBERON:0000073!3.98e-21!75;UBERON:0001016!3.98e-21!75;UBERON:0003056!6.73e-21!49;UBERON:0004121!4.77e-19!102;UBERON:0000924!4.77e-19!102;UBERON:0006601!4.77e-19!102;UBERON:0000955!7.30e-19!50;UBERON:0006238!7.30e-19!50;UBERON:0002616!1.14e-18!49;UBERON:0002020!3.68e-16!34;UBERON:0003080!4.99e-16!40;UBERON:0002780!1.85e-15!39;UBERON:0001890!1.85e-15!39;UBERON:0006240!1.85e-15!39;UBERON:0000153!8.97e-14!94;UBERON:0007811!3.15e-13!86;UBERON:0002791!1.52e-12!29;UBERON:0003528!1.52e-12!29;UBERON:0001893!1.52e-12!29;UBERON:0000956!4.06e-09!21;UBERON:0001869!4.06e-09!21;UBERON:0000203!4.06e-09!21;UBERON:0002619!3.44e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.96e-21,64;UBERON:0003075,4.96e-21,64;UBERON:0007284,4.96e-21,64;UBERON:0010371,1.52e-19,73;UBERON:0002020,5.64e-19,34;UBERON:0003056,1.18e-18,49;UBERON:0000073,1.76e-18,54;UBERON:0004121,2.59e-18,95;UBERON:0000924,2.59e-18,95;UBERON:0006601,2.59e-18,95;UBERON:0001049,3.95e-17,52;UBERON:0005068,3.95e-17,52;UBERON:0006241,3.95e-17,52;UBERON:0007135,3.95e-17,52;UBERON:0001017,1.08e-16,73;UBERON:0001016,6.23e-16,75;UBERON:0003528,2.32e-13,29;UBERON:0002791,2.32e-13,29;UBERON:0001893,2.32e-13,29;UBERON:0003080,2.32e-13,40;UBERON:0010314,5.98e-13,92;UBERON:0002780,1.46e-12,39;UBERON:0001890,1.46e-12,39;UBERON:0006240,1.46e-12,39;UBERON:0002616,1.35e-11,46;UBERON:0000955,3.46e-11,47;UBERON:0006238,3.46e-11,47;UBERON:0002240,1.40e-08,6;UBERON:0005174,1.40e-08,6;UBERON:0001137,1.40e-08,6;UBERON:0001948,7.88e-08,5;UBERON:0002315,7.88e-08,5;UBERON:0002420,9.77e-08,8;UBERON:0007245,9.77e-08,8;UBERON:0010009,9.77e-08,8;UBERON:0010011,9.77e-08,8;UBERON:0000454,9.77e-08,8;UBERON:0000020,1.20e-07,12;UBERON:0001032,1.20e-07,12;UBERON:0004456,1.20e-07,12;UBERON:0000956,1.37e-07,21;UBERON:0001869,1.37e-07,21;UBERON:0000203,1.37e-07,21;UBERON:0000033,6.88e-07,13;UBERON:0005085,6.88e-07,13 | |||
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08207792725135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.436050312760893,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,10.3181395038395,8.99284664762456,5.07065122804943,0,0,0,0,0,0.299600110518405,0.384218305321555,2.38486108309499,2.70011876663381,1.68259969081106,5.99867067247988,7.95126747425809,2.69479758272899,4.50473713785711,3.67687514644008,1.10115880999389,1.78762273319263,1.22885226604995,12.924856197559,14.6380229763855,15.106487746146,1.67509799400829,1.12552522006336,1.83357897332172,5.89257170947335,7.83044244395066,9.13357284543973,0.227178579999552,0,0,0,0,0,0,0,0.280888840263504,0,0,0,3.80277233397037,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0.230615497256059,0,0.117588707135705,0,0.494389935468748,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,1.79748767285787,0,4.14659361972453,0.869121600961382,1.79000820131231,1.24672826735736,0.648965052271031,0.916554274652847,0,0,0.420883711772948,2.08192708740326,1.60931473103431,2.16074555766419,2.71268672104287,3.94611695077702,4.35586648968489,3.46696380870997,0.776110112217047,0.646703978798527,1.13463648100692,1.23165786914764,0.876782929710299,0.278047249225598,0,0.205782136407943,0.59710280045548,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0.393528463494808,0,0.232533944750408,0,0,0,0,0.0810688095458557,0,0,0,0.420579897128254,4.52780294468852,0,0,0.853153002140936,0.928946687441754,0.128867461322093,0.201683524623343,0.22237804384487,0,0.474529061544512,0,0,0,0,0,0,0,0,0.685491075658373,1.1270773567308,0.407302655690628,0.193952487167626,0.350679099451593,0.126473074248515,0,0,0,0,0.333690211432188,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0.678980343100753,0.234690248288502,0,0,0,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,1.12385412991454,0.703270119553219,0,0,0.315508219416257,0,0.646270193198397,0,0.222798674082394,0.283076530788832,0,0,0.395287777946524,0.642642632843614,0.567760340833074,0.534196811001766,0.81443479676788,0.164970122972535,0,1.21390318077491,0.302323556964751,0,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,1.26042765821917,1.55230420539305,0.857348140126369,0.886701168211368,1.07021290561242,0.822745103010605,0.608929898229199,0,0,1.10264199027481,0,0,0,0,0.164140899745061,0,1.48340241608408,0,0.619160603889667,0.185194527369712,0,0,0,0,0,0,0,1.26534397432454,0.406638934253697,0.324016022465404,0.209088296014469,0,0.134864346384821,0,0,0.129614973291793,0,10.1464728963154,0.747582730219894,0.66183396182839,1.16670713006429,0.258319646955462,0,0.234714477291508,0.39061315453185,1.15345278868282,10.8712854371703,12.3852902690882,0,0.202725215290164,0.308132871494482,0.129920822977795,0,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0,0,0,0.116876902181569,0,0,0.0897138566094757,0,0,0,0.183151624267265,0,0,2.82375921308533,0.920650473014354,1.71868654031819,1.3748254587495,2.05524755931193,2.2661816921691,1.35004500046361,0.45032120322422,0.453142408984205,0.51776031175182,1.86817225651518,1.99512436700516,1.53660245178721,0.729320151204882,0.838452650511929,1.2869045591501,1.11123363900808,1.03017528619447,0,1.51618327058278,1.01391719956096,0.188626341386076,1.03005658216871,0.576226371643824,0.746661096422973,0,1.27472758539341,1.15745532278223,0.412085900803307,0.441596760403192,0.342869252385415,1.24233064311536,1.43061713968393,1.16277133305863,0.658765662907314,1.09998990259179,1.09756783723664,1.31534855718921,0.543216455383447,0.561142271657738,2.01679530811096,1.77308068276014,0,0.929621047115796,0.385813221962283,0.999242311751784,0.233931608445408,0.644613162144895,0,0,0.231867835620421 | |||
|short_description=p5@Rimklb | |||
}} |
Revision as of 01:37, 5 August 2015
Short description: | p5@Rimklb |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Rimklb_5end |
Coexpression cluster: | MCL_coexpression_mm9:2275 |
Association with transcript: | 0bp_to_NM_027664, uc009dpg.1_5end |
EntrezGene: | 108653 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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CNS neuron (sensu Vertebrata) | 1.02e-26 | 23 |
neuroblast (sensu Vertebrata) | 1.02e-26 | 23 |
neuron | 5.56e-18 | 33 |
neuronal stem cell | 5.56e-18 | 33 |
neuroblast | 5.56e-18 | 33 |
electrically signaling cell | 5.56e-18 | 33 |
electrically responsive cell | 5.16e-14 | 39 |
electrically active cell | 5.16e-14 | 39 |
ectodermal cell | 6.99e-13 | 44 |
neurectodermal cell | 6.99e-13 | 44 |
neural cell | 5.24e-12 | 43 |
neuron of cerebral cortex | 7.78e-08 | 6 |