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FFCP PHASE1:Mm9::chr6:120314112..120314181,+: Difference between revisions

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{{FFCP|EntrezGene=214899|HGNC=|UniProt=E9Q8F1,Q3UXZ9,Q3UT97|association_with_transcript=0bp_to_ENSMUST00000005108,ENSMUST00000100996,ENSMUST00000135802,ENSMUST00000152293,NM_145997,uc009dnd.2,uc009dne.2,uc009dnf.2,uc009dng.2_5end|description=CAGE_peak_1_at_Kdm5a_5end|id=chr6:120314112..120314181,+|ontology_enrichment_celltype=CL:0002031!2.67e-07!25;CL:0000050!5.42e-07!9|ontology_enrichment_celltype_v019_2=CL:0002031,2.67e-07,25;CL:0000050,5.42e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!5.74e-07!29;UBERON:0001048!6.54e-07!147|ontology_enrichment_uberon_v019_2=UBERON:0000077,1.42e-07,35;UBERON:0001048,1.53e-07,134;UBERON:0004177,5.74e-07,29;UBERON:0005057,5.74e-07,29|phase1_expression=14.5735450865363,24.0793031271159,20.9299650119187,29.3390284967625,33.5600139064053,17.7952028226603,23.127651418957,28.5362544805884,29.987997818305,29.9602593692152,25.6826952338257,20.5812170207968,28.0769197087177,29.1109940055261,31.9785371343036,27.1316858302367,27.2829132469977,32.3348719492194,41.4085589489331,45.8340823941873,14.0321428749265,14.5957698265301,18.8063848180033,17.7591589300681,11.6998733344257,16.6527269593356,12.9228598847722,15.2984575206981,10.6413114895569,12.0974462284767,11.5299865540758,40.0069324279568,33.8285633171514,31.6963362030877,16.7533939455739,8.31173226792462,14.7001936508906,34.3195937204264,20.3147189576188,24.0820922227947,39.411509698078,35.5183652178392,33.9857247121808,12.9673722514845,12.2666086775613,9.17733760808408,10.9534788208725,5.01457859675027,3.95435128922049,8.1660557611199,5.73944328663986,1.43752564364972,40.2678254538567,37.7188313845899,37.642505503956,14.1492689819771,17.7650732762029,15.9858348606007,8.6996078169627,10.0508286061686,6.33831403506179,5.42151251310611,3.55717918444456,5.84934816232909,5.93319817540185,4.9733608046227,5.09320187881288,2.30530983192933,9.64313394468842,8.91039192989158,7.78202357000113,7.9982275633065,8.1721360152097,7.34944795289724,9.87208351487835,10.1114066527102,20.9220173898839,12.6410464704336,14.2854075928306,6.59431438650969,7.13603620098795,7.8137005583514,8.37548997004143,15.757353080887,10.8486755921535,14.7314292736834,12.9558229527184,9.69277118291563,10.7531194533121,10.0510174942025,43.7695377939533,18.0689014166091,13.599426674155,10.2543606411185,12.9955283489534,15.2329141613094,14.6062196937022,6.64678258054425,5.97507810586598,6.71345191569646,14.7885590765515,7.69958864485907,30.5766287647975,7.11066703153331,15.3708639117962,19.0019899106324,22.2430755806505,15.8715592809493,27.4474156666002,18.5552673831031,12.4909435271618,10.6562917409249,14.2981608298756,13.1128697280782,23.0473865985981,16.5879900555172,22.9891319992968,20.2439099687876,15.0383793831479,17.1472860944254,23.8508839937225,22.7891368973554,7.45567044872489,26.3502717310392,24.0863712835473,10.2182822083437,16.1750418082992,15.5974710058286,14.7401463404755,15.1288545798871,22.4175295381127,11.0575829859321,12.1677024134594,14.8314965251592,14.9607392082883,15.412919991437,20.2660334062129,18.2878246796837,16.4269792981889,18.0979996062368,15.0939713836736,13.3343220571414,14.945156773844,15.5225962370787,21.9077527267276,18.5764894413032,19.6773621575431,27.4225572983357,10.993967639575,13.615637772083,18.8267702855425,13.1517439456545,12.2340789659263,17.4126083261083,17.4914815946752,19.1072896145753,14.7464769335779,14.9261786126535,17.0498099637356,17.8128164380532,17.5894544985822,17.4660199617184,17.0456209621351,18.2990735525086,16.6608481918369,13.9520366850245,18.2425912951741,22.4189457344965,19.9117418395311,18.2225885127796,21.0778904819225,25.7311977868585,18.6617597997393,22.009852676701,13.6688466566683,12.657267322652,17.1817767151575,19.3048913664387,14.2903127858607,14.1664369834868,15.5929628199733,16.7397325437374,18.2349995952794,13.5060194539917,15.6594590309689,13.6700132420929,18.0961350336194,16.1154742353332,17.5467678407208,31.4586793028978,17.9394581395996,15.9313018603494,9.67306294860717,16.7945313536301,16.9061603509621,17.514014194697,16.0980564349129,24.1267220422696,15.5561881325673,15.0562350939194,16.9558626068685,15.5480426541469,14.8226313543574,22.5240892716727,14.545365638377,22.2613491261005,20.0831520174618,16.4000468631643,16.5506803657923,16.686375972147,21.0775794807546,12.0807021802756,25.8782771749238,16.3742016974142,14.0416952901552,17.9331003342449,14.7105879087968,15.4381926836277,22.5398892003258,11.3694847062291,11.8964432802679,13.0703716046895,18.5405296147917,23.1158635269706,19.2815349117671,20.4890330250689,20.8078390220172,18.6030339304971,19.4534817762134,17.8611013040154,18.131923095919,17.7918342055259,7.53956419696361,15.7732648307426,14.7529281905711,21.5230662117691,13.4862495589745,14.6514608240254,8.19674726883377,21.9649706667804,12.9358369960665,15.6175497718655,16.1567548299599,13.3822526853429,15.3731085116852,17.5507449089076,12.1443210502468,14.9050487534769,11.8586333383957,17.3513510867776,21.0071326108238,11.5742642383716,22.9670612688542,18.9715641418416,18.5843193675948,11.8962511715941,14.8138542912728,14.7111962209601,6.79194353625777,17.5238034328039,24.550687850981,13.8142817201452,18.8943610543902,18.962205476149,13.7044191147498,11.3449097573006,17.3624198934432,15.3051929926614,7.89087971074802,15.4322665222746,14.3645589250242,19.7989387538298,17.2776471632227,17.6589670486468,17.6003781047783,18.0057260234247,18.5243854366168,23.2489616647487,23.2508774442104,20.2651427758604,20.6514155125426,21.9948805658382,14.8655226681224,15.9465759729038,23.7510524309015,15.2726282292785,18.7046472643409,23.3576886685817,30.6195070095096,23.5641518402718,23.2870449091582,17.0740771834863,22.3883957563167,3.81868247206045,14.3932877079417,16.062237903021,15.1207477150522,16.7270636811575,17.4690050996942,17.3975006836419,18.1837602595739,17.0141362289619,16.0722566881823,13.6694648879124,15.2197093444731,17.7924689792335,17.7040584789094,15.1671926908357,15.8866582877609,15.5439635451516,22.1805181040475,20.4420884205002,31.4578033277133,26.0910850492087,24.1945205256607,19.9087005995752,14.798940716182,15.6120654890537,19.3582026236915,18.0816962624156,21.0602236068141,22.3563536107142,23.4826348207578,22.5155183384369,24.9958325828399,21.5768036192839,26.8009172034319,25.7847735596083,30.5048714693895,19.4988129909082,19.0907919901696,31.489563669926,14.7738462400389,15.6483571166074,13.3254557570339,17.948859178192,21.0081011497485,15.0471631210609,11.8597886949584,12.4287813856938,11.4579102687879,21.997207339992,15.7568979547248,9.82012066606611,7.42524750254986,18.0128481289688,17.672553950384,12.9440077937955,11.727970277012,15.1629451892392,12.9757540373142,17.7467903459855,11.319110781911,11.2144540154509,17.7797382241292,16.6888396363504,15.4041220604071,14.4037410705365,18.7574681918777,18.8626341386076,16.3872638072294,16.1343384060271,17.977301783107,13.3362233559261,19.0050294549563,18.326375944052,15.2471783297223,18.3998650167997,13.3719008430312,17.0376773912964,20.028639955575,17.4415699958794,19.5747511263888,18.1921406967104,18.1098693144045,14.2057644176435,16.9755142307327,17.3954104213899,18.388427809247,19.3068785456104,21.6892452879935,17.8177367363861,15.6254354894725,14.9886346762768,18.0127338502964,19.3383948643468,23.5284648444677,14.117850823649,14.1439379728457|short_description=p1@Kdm5a}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:214899
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:E9Q8F1,uniprot:Q3UXZ9,uniprot:Q3UT97
|association_with_transcript=0bp_to_ENSMUST00000005108,ENSMUST00000100996,ENSMUST00000135802,ENSMUST00000152293,NM_145997,uc009dnd.2,uc009dne.2,uc009dnf.2,uc009dng.2_5end
|cluster_id=chr6:120314112..120314181,+
|description=CAGE_peak_1_at_Kdm5a_5end
|id=chr6:120314112..120314181,+
|ontology_enrichment_celltype=CL:0002031!2.67e-07!25;CL:0000050!5.42e-07!9
|ontology_enrichment_celltype_v019_2=CL:0002031,2.67e-07,25;CL:0000050,5.42e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!5.74e-07!29;UBERON:0001048!6.54e-07!147
|ontology_enrichment_uberon_v019_2=UBERON:0000077,1.42e-07,35;UBERON:0001048,1.53e-07,134;UBERON:0004177,5.74e-07,29;UBERON:0005057,5.74e-07,29
|phase1_expression=14.5735450865363,24.0793031271159,20.9299650119187,29.3390284967625,33.5600139064053,17.7952028226603,23.127651418957,28.5362544805884,29.987997818305,29.9602593692152,25.6826952338257,20.5812170207968,28.0769197087177,29.1109940055261,31.9785371343036,27.1316858302367,27.2829132469977,32.3348719492194,41.4085589489331,45.8340823941873,14.0321428749265,14.5957698265301,18.8063848180033,17.7591589300681,11.6998733344257,16.6527269593356,12.9228598847722,15.2984575206981,10.6413114895569,12.0974462284767,11.5299865540758,40.0069324279568,33.8285633171514,31.6963362030877,16.7533939455739,8.31173226792462,14.7001936508906,34.3195937204264,20.3147189576188,24.0820922227947,39.411509698078,35.5183652178392,33.9857247121808,12.9673722514845,12.2666086775613,9.17733760808408,10.9534788208725,5.01457859675027,3.95435128922049,8.1660557611199,5.73944328663986,1.43752564364972,40.2678254538567,37.7188313845899,37.642505503956,14.1492689819771,17.7650732762029,15.9858348606007,8.6996078169627,10.0508286061686,6.33831403506179,5.42151251310611,3.55717918444456,5.84934816232909,5.93319817540185,4.9733608046227,5.09320187881288,2.30530983192933,9.64313394468842,8.91039192989158,7.78202357000113,7.9982275633065,8.1721360152097,7.34944795289724,9.87208351487835,10.1114066527102,20.9220173898839,12.6410464704336,14.2854075928306,6.59431438650969,7.13603620098795,7.8137005583514,8.37548997004143,15.757353080887,10.8486755921535,14.7314292736834,12.9558229527184,9.69277118291563,10.7531194533121,10.0510174942025,43.7695377939533,18.0689014166091,13.599426674155,10.2543606411185,12.9955283489534,15.2329141613094,14.6062196937022,6.64678258054425,5.97507810586598,6.71345191569646,14.7885590765515,7.69958864485907,30.5766287647975,7.11066703153331,15.3708639117962,19.0019899106324,22.2430755806505,15.8715592809493,27.4474156666002,18.5552673831031,12.4909435271618,10.6562917409249,14.2981608298756,13.1128697280782,23.0473865985981,16.5879900555172,22.9891319992968,20.2439099687876,15.0383793831479,17.1472860944254,23.8508839937225,22.7891368973554,7.45567044872489,26.3502717310392,24.0863712835473,10.2182822083437,16.1750418082992,15.5974710058286,14.7401463404755,15.1288545798871,22.4175295381127,11.0575829859321,12.1677024134594,14.8314965251592,14.9607392082883,15.412919991437,20.2660334062129,18.2878246796837,16.4269792981889,18.0979996062368,15.0939713836736,13.3343220571414,14.945156773844,15.5225962370787,21.9077527267276,18.5764894413032,19.6773621575431,27.4225572983357,10.993967639575,13.615637772083,18.8267702855425,13.1517439456545,12.2340789659263,17.4126083261083,17.4914815946752,19.1072896145753,14.7464769335779,14.9261786126535,17.0498099637356,17.8128164380532,17.5894544985822,17.4660199617184,17.0456209621351,18.2990735525086,16.6608481918369,13.9520366850245,18.2425912951741,22.4189457344965,19.9117418395311,18.2225885127796,21.0778904819225,25.7311977868585,18.6617597997393,22.009852676701,13.6688466566683,12.657267322652,17.1817767151575,19.3048913664387,14.2903127858607,14.1664369834868,15.5929628199733,16.7397325437374,18.2349995952794,13.5060194539917,15.6594590309689,13.6700132420929,18.0961350336194,16.1154742353332,17.5467678407208,31.4586793028978,17.9394581395996,15.9313018603494,9.67306294860717,16.7945313536301,16.9061603509621,17.514014194697,16.0980564349129,24.1267220422696,15.5561881325673,15.0562350939194,16.9558626068685,15.5480426541469,14.8226313543574,22.5240892716727,14.545365638377,22.2613491261005,20.0831520174618,16.4000468631643,16.5506803657923,16.686375972147,21.0775794807546,12.0807021802756,25.8782771749238,16.3742016974142,14.0416952901552,17.9331003342449,14.7105879087968,15.4381926836277,22.5398892003258,11.3694847062291,11.8964432802679,13.0703716046895,18.5405296147917,23.1158635269706,19.2815349117671,20.4890330250689,20.8078390220172,18.6030339304971,19.4534817762134,17.8611013040154,18.131923095919,17.7918342055259,7.53956419696361,15.7732648307426,14.7529281905711,21.5230662117691,13.4862495589745,14.6514608240254,8.19674726883377,21.9649706667804,12.9358369960665,15.6175497718655,16.1567548299599,13.3822526853429,15.3731085116852,17.5507449089076,12.1443210502468,14.9050487534769,11.8586333383957,17.3513510867776,21.0071326108238,11.5742642383716,22.9670612688542,18.9715641418416,18.5843193675948,11.8962511715941,14.8138542912728,14.7111962209601,6.79194353625777,17.5238034328039,24.550687850981,13.8142817201452,18.8943610543902,18.962205476149,13.7044191147498,11.3449097573006,17.3624198934432,15.3051929926614,7.89087971074802,15.4322665222746,14.3645589250242,19.7989387538298,17.2776471632227,17.6589670486468,17.6003781047783,18.0057260234247,18.5243854366168,23.2489616647487,23.2508774442104,20.2651427758604,20.6514155125426,21.9948805658382,14.8655226681224,15.9465759729038,23.7510524309015,15.2726282292785,18.7046472643409,23.3576886685817,30.6195070095096,23.5641518402718,23.2870449091582,17.0740771834863,22.3883957563167,3.81868247206045,14.3932877079417,16.062237903021,15.1207477150522,16.7270636811575,17.4690050996942,17.3975006836419,18.1837602595739,17.0141362289619,16.0722566881823,13.6694648879124,15.2197093444731,17.7924689792335,17.7040584789094,15.1671926908357,15.8866582877609,15.5439635451516,22.1805181040475,20.4420884205002,31.4578033277133,26.0910850492087,24.1945205256607,19.9087005995752,14.798940716182,15.6120654890537,19.3582026236915,18.0816962624156,21.0602236068141,22.3563536107142,23.4826348207578,22.5155183384369,24.9958325828399,21.5768036192839,26.8009172034319,25.7847735596083,30.5048714693895,19.4988129909082,19.0907919901696,31.489563669926,14.7738462400389,15.6483571166074,13.3254557570339,17.948859178192,21.0081011497485,15.0471631210609,11.8597886949584,12.4287813856938,11.4579102687879,21.997207339992,15.7568979547248,9.82012066606611,7.42524750254986,18.0128481289688,17.672553950384,12.9440077937955,11.727970277012,15.1629451892392,12.9757540373142,17.7467903459855,11.319110781911,11.2144540154509,17.7797382241292,16.6888396363504,15.4041220604071,14.4037410705365,18.7574681918777,18.8626341386076,16.3872638072294,16.1343384060271,17.977301783107,13.3362233559261,19.0050294549563,18.326375944052,15.2471783297223,18.3998650167997,13.3719008430312,17.0376773912964,20.028639955575,17.4415699958794,19.5747511263888,18.1921406967104,18.1098693144045,14.2057644176435,16.9755142307327,17.3954104213899,18.388427809247,19.3068785456104,21.6892452879935,17.8177367363861,15.6254354894725,14.9886346762768,18.0127338502964,19.3383948643468,23.5284648444677,14.117850823649,14.1439379728457
|short_description=p1@Kdm5a
}}

Revision as of 00:47, 5 August 2015

Short description:p1@Kdm5a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Kdm5a_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000005108, ENSMUST00000100996, ENSMUST00000135802, ENSMUST00000152293, NM_145997, uc009dnd.2, uc009dne.2, uc009dnf.2, uc009dng.2_5end
EntrezGene:214899
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Kdm5a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G714.57
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I524.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I620.93
CD326+ enterocyte, pool1.CNhs13542.11848-124I329.34
CD326+ enterocyte, pool2.CNhs13197.11849-124I433.56
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I717.80
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I823.13
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E928.54
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E729.99
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F229.96
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E625.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F120.58
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E428.08
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E829.11
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A131.98
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A327.13
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A527.28
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A232.33
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A441.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A645.83
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A314.03
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H214.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I918.81
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D117.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D211.70
GP2+ M cell, pool1.CNhs13228.11845-124H916.65
GP2+ M cell, pool2.CNhs13231.11846-124I112.92
GP2+ M cell, pool3.CNhs13240.11847-124I215.30
Ileum epithelium, pool1.CNhs13199.10252-104B910.64
Ileum epithelium, pool2.CNhs13232.10253-104C112.10
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C811.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I340.01
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G633.83
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F516.75
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F68.31
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F714.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G834.32
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H120.31
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H324.08
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G939.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H235.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H433.99
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D812.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D912.27
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B39.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.95
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.01
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.95
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.74
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A240.27
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I937.72
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A137.64
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C114.15
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E117.77
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C515.99
Mouse Granule cells, donor1.CNhs12131.11713-123C38.70
Mouse Granule cells, donor2.CNhs12357.11731-123E310.05
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.42
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.85
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.97
Mouse Microglia, donor1.CNhs12629.11718-123C85.09
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.64
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.91
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.78
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.17
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.87
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D610.11
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D320.92
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D714.29
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.59
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.14
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.81
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.38
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E515.76
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.85
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D614.73
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.96
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.69
Mouse Schwann, donor1.CNhs12507.11728-123D910.75
Mouse Schwann, donor2.CNhs12573.11746-123F910.05
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G343.77
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F718.07
Mouse hepatocyte, donor1.CNhs13078.11714-123C413.60
Mouse hepatocyte, donor3.CNhs12615.11637-122C810.25
Mouse hepatocyte, donor6.CNhs13090.11822-124F413.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F615.23
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A714.61
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G614.79
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I830.58
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G115.37
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G219.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G322.24
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B615.87
accessory axillary lymph node, adult.CNhs10475.1063-29H927.45
adrenal gland, adult.CNhs10508.49-24D718.56
adrenal gland, embryo E14.CNhs11038.406-44C512.49
adrenal gland, embryo E16.CNhs11004.1254-43D610.66
adrenal gland, embryo E17.CNhs11043.1263-45I114.30
adrenal gland, embryo E18.CNhs11026.1262-18F513.11
adrenal gland, neonate N00.CNhs11191.1311-23C123.05
adrenal gland, neonate N25.CNhs11223.1377-27I316.59
amnion, adult pregnant day17.5.CNhs10488.583-22A822.99
aorta, adult.CNhs10498.46-23H120.24
bone (os femoris), adult.CNhs10483.56-12G215.04
bone (os femoris), neonate N02.CNhs11227.1985-43F517.15
bone (os femoris), neonate N16.CNhs11225.1525-43A623.85
bone (os femoris), neonate N20.CNhs11195.1350-25C322.79
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B226.35
cerebellum, neonate N30.CNhs11135.1395-42I224.09
colon, adult.CNhs10468.36-18H710.22
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C716.18
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D115.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D414.74
corpora quadrigemina, adult.CNhs10501.16-22A415.13
corpus striatum, adult.CNhs10487.19-21D822.42
corpus striatum, neonate N00.CNhs11226.630-43F111.06
cortex, adult.CNhs10473.12-14D512.17
cortex, neonate N30.CNhs11107.1392-42F214.83
diencephalon, adult.CNhs10482.20-12F214.96
diencephalon, neonate N30.CNhs11201.1388-42B215.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B120.27
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A218.29
epididymis, adult.CNhs10490.58-23B216.43
eyeball, adult.CNhs10484.31-12G418.10
eyeball, embryo E12.CNhs11016.345-16C615.09
eyeball, embryo E14.CNhs10521.399-16E213.33
eyeball, embryo E15.CNhs10593.426-16C914.95
eyeball, embryo E17.CNhs11023.1261-18D415.52
eyeball, neonate N00.CNhs11207.633-15C621.91
eyeball, neonate N01.CNhs11140.1532-43E718.58
eyeball, neonate N02.CNhs11205.1551-44G819.68
eyeball, neonate N16.CNhs11188.777-19A227.42
forelimb, embryo E11.CNhs10596.335-25E210.99
forelimb, embryo E12.CNhs10600.359-14H213.62
forelimb, embryo E13.CNhs10589.384-1E218.83
forelimb, embryo E14.CNhs10577.413-26A813.15
forelimb, embryo E15.CNhs11007.437-20E712.23
forelimb, embryo E17.CNhs10598.1517-43C417.41
forelimb, embryo E18.CNhs11008.1520-43B517.49
gonad, embryo E13.CNhs11044.1564-45I619.11
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C814.75
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D214.93
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D517.05
heart, embryo E11.CNhs10586.331-24E917.81
heart, embryo E12.CNhs11015.353-12F517.59
heart, embryo E13.CNhs11013.376-3I917.47
heart, embryo E14.CNhs10597.403-26D417.05
heart, embryo E15.CNhs11017.431-16C818.30
heart, embryo E16.CNhs11021.457-17C616.66
heart, embryo E17.CNhs11025.479-18E513.95
heart, embryo E18.CNhs11030.1283-20G318.24
heart, neonate N00.CNhs11213.639-21E322.42
heart, neonate N03.CNhs11221.1349-25I219.91
heart, neonate N10.CNhs11118.749-24G118.22
heart, neonate N16.CNhs11209.782-15G121.08
heart, neonate N20.CNhs11127.821-26I625.73
heart, neonate N25.CNhs11196.1351-25D318.66
heart, neonate N30.CNhs11202.1390-42D222.01
hippocampus, adult.CNhs10478.13-16E813.67
hippocampus, neonate N00.CNhs11228.627-43G112.66
intestinal mucosa, adult.CNhs10506.860-29I317.18
intestine, adult.CNhs10496.178-9A319.30
intestine, embryo E12.CNhs11019.1251-16I514.29
intestine, embryo E13.CNhs11010.381-16D514.17
intestine, embryo E15.CNhs10602.976-16D815.59
intestine, embryo E16.CNhs10585.463-22H416.74
intestine, embryo E17.CNhs10582.482-18D318.23
intestine, embryo E18.CNhs10526.1289-20F713.51
intestine, neonate N00.CNhs11126.644-26D115.66
intestine, neonate N01.CNhs11192.1322-23E913.67
intestine, neonate N06.CNhs11102.688-20B818.10
intestine, neonate N07.CNhs11095.720-20F216.12
intestine, neonate N10.CNhs11098.755-23A517.55
intestine, neonate N20.CNhs11187.827-18D131.46
intestine, neonate N25.CNhs11121.1352-25E317.94
intestine, neonate N30.CNhs11131.1384-42G115.93
kidney, embryo E14.CNhs10606.411-4I99.67
kidney, embryo E15.CNhs10997.434-16F816.79
kidney, embryo E16.CNhs10584.464-22A516.91
kidney, embryo E17.CNhs11028.483-18I217.51
kidney, embryo E18.CNhs11001.1288-20C716.10
kidney, neonate N00.CNhs11214.646-21G724.13
kidney, neonate N10.CNhs11206.758-6D515.56
kidney, neonate N20.CNhs11113.832-19I115.06
kidney, neonate N25.CNhs11122.1353-25F316.96
kidney, neonate N30.CNhs11203.1385-42H115.55
liver, adult pregnant day01.CNhs10466.508-5B214.82
liver, embryo E12.CNhs10601.355-15F822.52
liver, embryo E13.CNhs10524.378-3H614.55
liver, embryo E14.CNhs10594.409-16E122.26
liver, embryo E15.CNhs10520.433-16D720.08
liver, embryo E16.CNhs10523.462-17F516.40
liver, embryo E17.CNhs10510.481-18A316.55
liver, embryo E18.CNhs10579.499-43G416.69
liver, neonate N00.CNhs11117.641-24F421.08
liver, neonate N03.CNhs11123.1345-25G212.08
liver, neonate N06.CNhs11101.684-20A825.88
liver, neonate N07.CNhs11103.716-20H216.37
liver, neonate N10.CNhs11115.751-24B914.04
liver, neonate N20.CNhs11220.823-25A317.93
liver, neonate N25.CNhs11198.1368-26H114.71
liver, neonate N30.CNhs11106.1382-42D115.44
lung, adult.CNhs10474.28-22B122.54
lung, embryo E12.CNhs10522.354-16G211.37
lung, embryo E14.CNhs10604.404-26F811.90
lung, embryo E15.CNhs11020.432-17C513.07
lung, embryo E16.CNhs10998.458-17B618.54
lung, embryo E17.CNhs10605.480-44A623.12
lung, embryo E18.CNhs10583.1287-20I619.28
lung, neonate N00.CNhs11224.640-42C620.49
lung, neonate N06.CNhs11212.683-20E520.81
lung, neonate N07.CNhs11111.715-19A318.60
lung, neonate N10.CNhs11219.750-23E619.45
lung, neonate N20.CNhs11109.822-18A417.86
lung, neonate N25.CNhs11119.1359-25C718.13
lung, neonate N30.CNhs11133.1394-42H217.79
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A115.77
mammary gland, adult lactating day02.CNhs10480.595-22B614.75
mammary gland, adult pregnant day19.CNhs10476.588-5H221.52
medulla oblongata, adult.CNhs10477.17-12C213.49
medulla oblongata, neonate N30.CNhs11200.1396-42A314.65
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C78.20
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C221.96
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E112.94
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E215.62
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E316.16
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D713.38
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D815.37
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D917.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D412.14
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D514.91
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.86
olfactory brain, adult.CNhs10489.18-22I917.35
ovary, adult.CNhs10507.91-2I721.01
ovary, embryo E18.CNhs11040.505-44H711.57
ovary, neonate N00.CNhs11217.1299-22I422.97
oviduct, adult pregnant day01.CNhs10500.988-6G618.97
pancreas, adult.CNhs10486.34-16E418.58
pancreas, embryo E14.CNhs11012.405-44F411.90
pancreas, embryo E15.CNhs11042.1556-45F214.81
pancreas, embryo E16.CNhs11003.460-26E514.71
pancreas, embryo E17.CNhs10599.1558-45G36.79
pancreas, embryo E18.CNhs10580.1535-43I717.52
pancreas, neonate N00.CNhs11105.645-26G924.55
pancreas, neonate N01.CNhs11138.1531-43D713.81
pancreas, neonate N02.CNhs11139.1539-43D818.89
pancreas, neonate N16.CNhs11136.787-43B618.96
pancreas, neonate N25.CNhs11094.1555-45E213.70
pancreas, neonate N30.CNhs11182.1548-44H511.34
pituitary gland, adult.CNhs10493.21-1G817.36
pituitary gland, embryo E12.CNhs11018.346-16E615.31
pituitary gland, embryo E13.CNhs11009.370-44C77.89
pituitary gland, embryo E14.CNhs11037.398-44A515.43
pituitary gland, embryo E15.CNhs10592.427-16B914.36
pituitary gland, embryo E16.CNhs11036.449-43F619.80
pituitary gland, embryo E17.CNhs11039.1265-44F517.28
pituitary gland, neonate N00.CNhs11190.1308-22E917.66
placenta, adult pregnant day10.CNhs10472.539-13I717.60
placenta, adult pregnant day17.CNhs10464.577-18G318.01
prostate, adult.CNhs10470.859-1F818.52
skin, adult.CNhs10492.30-1C323.25
skin, neonate N00.CNhs11124.650-25G423.25
skin, neonate N03.CNhs11215.662-22H320.27
skin, neonate N06.CNhs11097.693-20I520.65
skin, neonate N10.CNhs11108.762-6C421.99
small intestine, neonate N16.CNhs11114.790-21I114.87
spinal cord, adult.CNhs10505.24-13C915.95
spleen, adult.CNhs10465.25-2G223.75
spleen, embryo E16.CNhs11035.461-43C115.27
spleen, embryo E18.CNhs11011.1271-21F218.70
spleen, neonate N10.CNhs11116.752-24D123.36
spleen, neonate N20.CNhs11112.824-19H130.62
spleen, neonate N25.CNhs11099.1354-25G323.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C623.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C917.07
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D322.39
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E314.39
stomach, embryo E15.CNhs10603.1252-16G816.06
stomach, embryo E16.CNhs11022.459-17D415.12
stomach, embryo E17.CNhs11006.1035-18D516.73
stomach, embryo E18.CNhs10999.1286-20C617.47
stomach, neonate N03.CNhs11193.1340-24B817.40
stomach, neonate N07.CNhs11210.718-18A918.18
stomach, neonate N25.CNhs11104.1355-25E417.01
stomach, neonate N30.CNhs11134.1386-42I116.07
submandibular gland, adult.CNhs10469.59-29C113.67
testis, adult.CNhs10504.57-7G515.22
testis, embryo E13.CNhs11031.389-23F517.79
testis, embryo E15.CNhs11034.443-27C517.70
testis, embryo E16.CNhs11033.470-26G515.17
testis, embryo E17.CNhs11029.486-18I515.89
testis, embryo E18.CNhs11027.503-18G515.54
testis, neonate N00.CNhs11189.1300-22B722.18
testis, neonate N07.CNhs11222.726-26I420.44
testis, neonate N10.CNhs11204.763-44D931.46
testis, neonate N20.CNhs11110.839-18H326.09
testis, neonate N30.CNhs11130.1391-42E224.19
thymus, adult.CNhs10471.38-12B519.91
thymus, embryo E14.CNhs11041.402-44I414.80
thymus, embryo E15.CNhs11005.430-45I215.61
thymus, embryo E16.CNhs11002.456-26C519.36
thymus, embryo E17.CNhs10581.478-18C118.08
thymus, embryo E18.CNhs10595.1273-19G421.06
thymus, neonate N02.CNhs11181.1541-43F822.36
thymus, neonate N03.CNhs11137.2104-43C723.48
thymus, neonate N06.CNhs11197.681-26C422.52
thymus, neonate N07.CNhs11211.713-19D325.00
thymus, neonate N10.CNhs11194.748-24E421.58
thymus, neonate N20.CNhs11186.820-7A226.80
thymus, neonate N25.CNhs11125.1362-25G725.78
thymus, neonate N30.CNhs11132.1393-42G230.50
tongue, adult.CNhs10499.32-1B419.50
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H319.09
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F731.49
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G514.77
urinary bladder, adult.CNhs10481.879-12E415.65
uterus, adult pregnant day19.CNhs10497.590-15F513.33
uterus, adult.CNhs10509.92-27E517.95
vagina, adult.CNhs10502.89-27D521.01
vesicular gland, adult.CNhs10491.51-27F815.05
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.86
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A212.43
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A311.46
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D722.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A718.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A817.67
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.94
whole body, embryo E11.CNhs11014.324-5I811.73
whole body, embryo E12.CNhs10587.857-27C915.16
whole body, embryo E13.CNhs10512.372-23H212.98
whole body, embryo E14.5.CNhs10578.420-27D217.75
whole body, embryo E14.CNhs10519.395-14B111.32
whole body, embryo E16.CNhs10514.453-14F211.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G517.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G516.69
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G515.40
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G514.40
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G518.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G518.86
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G516.39
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G516.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G517.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G513.34
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G519.01
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G518.33
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G515.25
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G518.40
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G513.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G517.04
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G520.03
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G517.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G519.57
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G518.19
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G518.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G514.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G516.98
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G517.40
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G518.39
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G519.31
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G521.69
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G517.82
whole body, embryo E17.5.CNhs10513.490-9F915.63
whole body, embryo E17.CNhs10517.475-3I514.99
whole body, embryo E18.CNhs10516.493-3B318.01
whole body, neonate N00.CNhs10525.657-19C219.34
whole body, neonate N01.CNhs10576.659-23C623.53
whole body, neonate N06.CNhs10515.692-21D114.12
whole body, neonate N10.CNhs10518.761-6B414.14





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
mixed endoderm/mesoderm-derived structure1.42e-0735
primordium1.53e-07134
hemopoietic organ5.74e-0729
immune organ5.74e-0729
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