FFCP PHASE1:Mm9::chr1:141273546..141273560,-: Difference between revisions
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{{FFCP|EntrezGene=170788|HGNC=|MCL_coexpression_id=53|UniProt=Q8VHS2|association_with_transcript=57bp_to_ENSMUST00000059825,ENSMUST00000136062_5end|description=CAGE_peak_5_at_Crb1_5end|id=chr1:141273546..141273560,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!1.23e-21!9;UBERON:0000019!1.23e-21!9;UBERON:0000047!1.23e-21!9;UBERON:0004088!1.23e-21!9;UBERON:0002104!1.23e-21!9;UBERON:0001456!1.23e-21!9;UBERON:0003072!1.23e-21!9;UBERON:0003071!1.23e-21!9;UBERON:0004128!1.23e-21!9;UBERON:0001444!1.92e-17!11;UBERON:0000020!7.16e-16!12;UBERON:0001032!7.16e-16!12;UBERON:0004456!7.16e-16!12;UBERON:0005085!1.53e-14!13;UBERON:0003056!2.05e-10!49;UBERON:0000033!2.16e-07!63;UBERON:0002346!2.95e-07!71;UBERON:0003075!2.95e-07!71;UBERON:0007284!2.95e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.70e-67,9;UBERON:0000019,1.70e-67,9;UBERON:0000047,1.70e-67,9;UBERON:0010312,1.70e-67,9;UBERON:0004088,1.70e-67,9;UBERON:0002104,1.70e-67,9;UBERON:0001456,1.70e-67,9;UBERON:0003072,1.70e-67,9;UBERON:0004128,1.70e-67,9;UBERON:0003071,1.70e-67,9;UBERON:0001444,2.49e-55,11;UBERON:0000020,9.17e-51,12;UBERON:0001032,9.17e-51,12;UBERON:0004456,9.17e-51,12;UBERON:0000033,6.71e-47,13;UBERON:0005085,6.71e-47,13;UBERON:0007811,3.54e-17,36;UBERON:0000153,2.01e-14,43;UBERON:0003056,1.11e-12,49;UBERON:0002346,9.52e-10,64;UBERON:0003075,9.52e-10,64;UBERON:0007284,9.52e-10,64;UBERON:0010371,1.47e-08,73;UBERON:0010314,8.41e-07,92|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287536413054709,0,0,0,0,0.131886287730194,0.365950574409639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520481771850815,1.37941262660084,1.44049703844279,3.16480117455002,3.53789795586905,4.22775276940004,3.09215691047105,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0,0,0,0,0,0,0.182927972872773,0.263069711437843,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p5@Crb1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:170788 | |||
|HGNC= | |||
|MCL_coexpression_id=53 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8VHS2 | |||
|association_with_transcript=57bp_to_ENSMUST00000059825,ENSMUST00000136062_5end | |||
|cluster_id=chr1:141273546..141273560,- | |||
|description=CAGE_peak_5_at_Crb1_5end | |||
|id=chr1:141273546..141273560,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!1.23e-21!9;UBERON:0000019!1.23e-21!9;UBERON:0000047!1.23e-21!9;UBERON:0004088!1.23e-21!9;UBERON:0002104!1.23e-21!9;UBERON:0001456!1.23e-21!9;UBERON:0003072!1.23e-21!9;UBERON:0003071!1.23e-21!9;UBERON:0004128!1.23e-21!9;UBERON:0001444!1.92e-17!11;UBERON:0000020!7.16e-16!12;UBERON:0001032!7.16e-16!12;UBERON:0004456!7.16e-16!12;UBERON:0005085!1.53e-14!13;UBERON:0003056!2.05e-10!49;UBERON:0000033!2.16e-07!63;UBERON:0002346!2.95e-07!71;UBERON:0003075!2.95e-07!71;UBERON:0007284!2.95e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.70e-67,9;UBERON:0000019,1.70e-67,9;UBERON:0000047,1.70e-67,9;UBERON:0010312,1.70e-67,9;UBERON:0004088,1.70e-67,9;UBERON:0002104,1.70e-67,9;UBERON:0001456,1.70e-67,9;UBERON:0003072,1.70e-67,9;UBERON:0004128,1.70e-67,9;UBERON:0003071,1.70e-67,9;UBERON:0001444,2.49e-55,11;UBERON:0000020,9.17e-51,12;UBERON:0001032,9.17e-51,12;UBERON:0004456,9.17e-51,12;UBERON:0000033,6.71e-47,13;UBERON:0005085,6.71e-47,13;UBERON:0007811,3.54e-17,36;UBERON:0000153,2.01e-14,43;UBERON:0003056,1.11e-12,49;UBERON:0002346,9.52e-10,64;UBERON:0003075,9.52e-10,64;UBERON:0007284,9.52e-10,64;UBERON:0010371,1.47e-08,73;UBERON:0010314,8.41e-07,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287536413054709,0,0,0,0,0.131886287730194,0.365950574409639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520481771850815,1.37941262660084,1.44049703844279,3.16480117455002,3.53789795586905,4.22775276940004,3.09215691047105,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0,0,0,0,0,0,0.182927972872773,0.263069711437843,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@Crb1 | |||
}} |
Revision as of 22:40, 4 August 2015
Short description: | p5@Crb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Crb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:53 |
Association with transcript: | 57bp_to_ENSMUST00000059825, ENSMUST00000136062_5end |
EntrezGene: | 170788 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 1.70e-67 | 9 |
camera-type eye | 1.70e-67 | 9 |
simple eye | 1.70e-67 | 9 |
immature eye | 1.70e-67 | 9 |
ocular region | 1.70e-67 | 9 |
visual system | 1.70e-67 | 9 |
face | 1.70e-67 | 9 |
optic cup | 1.70e-67 | 9 |
optic vesicle | 1.70e-67 | 9 |
eye primordium | 1.70e-67 | 9 |
subdivision of head | 2.49e-55 | 11 |
sense organ | 9.17e-51 | 12 |
sensory system | 9.17e-51 | 12 |
entire sense organ system | 9.17e-51 | 12 |
head | 6.71e-47 | 13 |
ectodermal placode | 6.71e-47 | 13 |
craniocervical region | 3.54e-17 | 36 |
anterior region of body | 2.01e-14 | 43 |
pre-chordal neural plate | 1.11e-12 | 49 |
neurectoderm | 9.52e-10 | 64 |
neural plate | 9.52e-10 | 64 |
presumptive neural plate | 9.52e-10 | 64 |
ecto-epithelium | 1.47e-08 | 73 |
structure with developmental contribution from neural crest | 8.41e-07 | 92 |