FFCP PHASE1:Mm9::chr6:113991947..113991997,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=11941|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=11bp_to_ENSMUST00000152831_5end|description=CAGE_peak_3_at_Atp2b2_5end|id=chr6:113991947..113991997,-|ontology_enrichment_celltype=CL:0000117!2.09e-11!23;CL:0000337!2.09e-11!23;CL:0000540!3.82e-07!33;CL:0000047!3.82e-07!33;CL:0000031!3.82e-07!33;CL:0000404!3.82e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.42e-08,23;CL:0000337,1.42e-08,23;CL:0002610,2.00e-08,3;CL:0002614,8.28e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!9.12e-26!63;UBERON:0001049!8.74e-25!52;UBERON:0005068!8.74e-25!52;UBERON:0006241!8.74e-25!52;UBERON:0007135!8.74e-25!52;UBERON:0000955!1.55e-23!50;UBERON:0006238!1.55e-23!50;UBERON:0001017!2.63e-23!73;UBERON:0005743!2.63e-23!73;UBERON:0000073!3.06e-23!75;UBERON:0001016!3.06e-23!75;UBERON:0002616!1.40e-22!49;UBERON:0002346!1.18e-20!71;UBERON:0003075!1.18e-20!71;UBERON:0007284!1.18e-20!71;UBERON:0004121!1.25e-20!102;UBERON:0000924!1.25e-20!102;UBERON:0006601!1.25e-20!102;UBERON:0002020!2.45e-19!34;UBERON:0003056!5.73e-17!49;UBERON:0003080!3.38e-16!40;UBERON:0007811!2.20e-15!86;UBERON:0002780!2.41e-15!39;UBERON:0001890!2.41e-15!39;UBERON:0006240!2.41e-15!39;UBERON:0002791!3.00e-15!29;UBERON:0003528!3.00e-15!29;UBERON:0001893!3.00e-15!29;UBERON:0000153!8.69e-13!94;UBERON:0002021!2.57e-12!10;UBERON:0000411!2.57e-12!10;UBERON:0001950!2.57e-12!10;UBERON:0002619!4.16e-11!17;UBERON:0000956!9.86e-11!21;UBERON:0001869!9.86e-11!21;UBERON:0000203!9.86e-11!21;UBERON:0003076!1.68e-09!12;UBERON:0003057!1.68e-09!12;UBERON:0002298!4.57e-07!6;UBERON:0004111!6.11e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.86e-37,54;UBERON:0001049,3.38e-33,52;UBERON:0005068,3.38e-33,52;UBERON:0006241,3.38e-33,52;UBERON:0007135,3.38e-33,52;UBERON:0001017,4.12e-30,73;UBERON:0001016,3.91e-29,75;UBERON:0002346,7.11e-28,64;UBERON:0003075,7.11e-28,64;UBERON:0007284,7.11e-28,64;UBERON:0000955,3.02e-27,47;UBERON:0006238,3.02e-27,47;UBERON:0002021,2.69e-26,10;UBERON:0000411,2.69e-26,10;UBERON:0001950,2.69e-26,10;UBERON:0002020,4.12e-26,34;UBERON:0002616,1.78e-25,46;UBERON:0010371,1.14e-23,73;UBERON:0004121,3.18e-23,95;UBERON:0000924,3.18e-23,95;UBERON:0006601,3.18e-23,95;UBERON:0003528,2.93e-20,29;UBERON:0002791,2.93e-20,29;UBERON:0001893,2.93e-20,29;UBERON:0003080,6.42e-20,40;UBERON:0002780,2.50e-18,39;UBERON:0001890,2.50e-18,39;UBERON:0006240,2.50e-18,39;UBERON:0010314,1.73e-17,92;UBERON:0002619,1.78e-17,17;UBERON:0003056,3.52e-17,49;UBERON:0000956,1.75e-16,21;UBERON:0001869,1.75e-16,21;UBERON:0000203,1.75e-16,21;UBERON:0003076,1.57e-14,12;UBERON:0003057,1.57e-14,12;UBERON:0000025,8.33e-12,114;UBERON:0004111,1.25e-10,122;UBERON:0002950,6.83e-10,4;UBERON:0001891,6.83e-10,4;UBERON:0009616,6.83e-10,4;UBERON:0010286,6.83e-10,4;UBERON:0002240,2.83e-09,6;UBERON:0005174,2.83e-09,6;UBERON:0001137,2.83e-09,6;UBERON:0004684,2.00e-08,3;UBERON:0002275,2.00e-08,3;UBERON:0002038,8.28e-08,3;UBERON:0009663,8.28e-08,3;UBERON:0009661,8.28e-08,3;UBERON:0000125,8.28e-08,3;UBERON:0002308,8.28e-08,3;UBERON:0001948,2.80e-07,5;UBERON:0002315,2.80e-07,5;UBERON:0011216,3.74e-07,194;UBERON:0004733,7.10e-07,6;UBERON:0004732,7.10e-07,6;UBERON:0002028,7.10e-07,6;UBERON:0007277,7.10e-07,6|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.5072943780067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0,0,3.42781181284564,1.76694832761291,0.244981598429908,0.0958454710182364,0,11.0115880999389,20.42997409363,18.279177457493,0.131886287730194,0.365950574409639,0,14.2383329490704,6.75315132038016,5.65353516774197,3.83017161115768,2.98980529678116,0.559198337475902,0,0.151143120213571,0,0,0,0,0,0,0.561777680527007,0,0,0,0.704217098883403,0,0,0,0,0,0,0.68510327831436,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5401086924157,18.0124167859571,0,0,0,0,11.6836698735762,22.4175295381127,0.879580464790051,26.0736480288415,32.9872939956126,15.7918913865266,18.9822277789276,0,0,0,0,0,0,0,0.150704817835715,0.476255494059295,0.512454881139399,0.468508622798644,3.62184719034622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,8.83217783969334,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0,1.1270773567308,0,0,0.0701358198903186,0,0,0.31399745568275,0.370191491765402,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8807436590966,13.1277088983268,0,0,0,0,0,0,0,0,0,0,0,12.5315313404505,0.141940085208269,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0,0.608929898229199,0,0,0,0,0,0.120625849856312,0,0,0,11.8672193286726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0.0897138566094757,0,0,0,0,0,0,13.5540442228096,12.889106622201,22.9158205375759,14.6075204992134,31.5137959094495,32.4819375877571,33.7511250115903,26.1186297870048,24.9228324941313,33.6544202638683,0,0,0,0,0.209613162627982,0,0.44449345560323,0.206035057238894,0,0.252697211763798,0,0,0.0936415074698824,0.384150914429216,0.17230640686684,0,0,0.38581844092741,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0.188218760830661,0.25384382367503,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0,0.499621155875892,0.467863216890817,0.214871054048298,0.57386499620653,0.441182838239031,0|short_description=p3@Atp2b2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:11941 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=11bp_to_ENSMUST00000152831_5end | |||
|cluster_id=chr6:113991947..113991997,- | |||
|description=CAGE_peak_3_at_Atp2b2_5end | |||
|id=chr6:113991947..113991997,- | |||
|ontology_enrichment_celltype=CL:0000117!2.09e-11!23;CL:0000337!2.09e-11!23;CL:0000540!3.82e-07!33;CL:0000047!3.82e-07!33;CL:0000031!3.82e-07!33;CL:0000404!3.82e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.42e-08,23;CL:0000337,1.42e-08,23;CL:0002610,2.00e-08,3;CL:0002614,8.28e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!9.12e-26!63;UBERON:0001049!8.74e-25!52;UBERON:0005068!8.74e-25!52;UBERON:0006241!8.74e-25!52;UBERON:0007135!8.74e-25!52;UBERON:0000955!1.55e-23!50;UBERON:0006238!1.55e-23!50;UBERON:0001017!2.63e-23!73;UBERON:0005743!2.63e-23!73;UBERON:0000073!3.06e-23!75;UBERON:0001016!3.06e-23!75;UBERON:0002616!1.40e-22!49;UBERON:0002346!1.18e-20!71;UBERON:0003075!1.18e-20!71;UBERON:0007284!1.18e-20!71;UBERON:0004121!1.25e-20!102;UBERON:0000924!1.25e-20!102;UBERON:0006601!1.25e-20!102;UBERON:0002020!2.45e-19!34;UBERON:0003056!5.73e-17!49;UBERON:0003080!3.38e-16!40;UBERON:0007811!2.20e-15!86;UBERON:0002780!2.41e-15!39;UBERON:0001890!2.41e-15!39;UBERON:0006240!2.41e-15!39;UBERON:0002791!3.00e-15!29;UBERON:0003528!3.00e-15!29;UBERON:0001893!3.00e-15!29;UBERON:0000153!8.69e-13!94;UBERON:0002021!2.57e-12!10;UBERON:0000411!2.57e-12!10;UBERON:0001950!2.57e-12!10;UBERON:0002619!4.16e-11!17;UBERON:0000956!9.86e-11!21;UBERON:0001869!9.86e-11!21;UBERON:0000203!9.86e-11!21;UBERON:0003076!1.68e-09!12;UBERON:0003057!1.68e-09!12;UBERON:0002298!4.57e-07!6;UBERON:0004111!6.11e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.86e-37,54;UBERON:0001049,3.38e-33,52;UBERON:0005068,3.38e-33,52;UBERON:0006241,3.38e-33,52;UBERON:0007135,3.38e-33,52;UBERON:0001017,4.12e-30,73;UBERON:0001016,3.91e-29,75;UBERON:0002346,7.11e-28,64;UBERON:0003075,7.11e-28,64;UBERON:0007284,7.11e-28,64;UBERON:0000955,3.02e-27,47;UBERON:0006238,3.02e-27,47;UBERON:0002021,2.69e-26,10;UBERON:0000411,2.69e-26,10;UBERON:0001950,2.69e-26,10;UBERON:0002020,4.12e-26,34;UBERON:0002616,1.78e-25,46;UBERON:0010371,1.14e-23,73;UBERON:0004121,3.18e-23,95;UBERON:0000924,3.18e-23,95;UBERON:0006601,3.18e-23,95;UBERON:0003528,2.93e-20,29;UBERON:0002791,2.93e-20,29;UBERON:0001893,2.93e-20,29;UBERON:0003080,6.42e-20,40;UBERON:0002780,2.50e-18,39;UBERON:0001890,2.50e-18,39;UBERON:0006240,2.50e-18,39;UBERON:0010314,1.73e-17,92;UBERON:0002619,1.78e-17,17;UBERON:0003056,3.52e-17,49;UBERON:0000956,1.75e-16,21;UBERON:0001869,1.75e-16,21;UBERON:0000203,1.75e-16,21;UBERON:0003076,1.57e-14,12;UBERON:0003057,1.57e-14,12;UBERON:0000025,8.33e-12,114;UBERON:0004111,1.25e-10,122;UBERON:0002950,6.83e-10,4;UBERON:0001891,6.83e-10,4;UBERON:0009616,6.83e-10,4;UBERON:0010286,6.83e-10,4;UBERON:0002240,2.83e-09,6;UBERON:0005174,2.83e-09,6;UBERON:0001137,2.83e-09,6;UBERON:0004684,2.00e-08,3;UBERON:0002275,2.00e-08,3;UBERON:0002038,8.28e-08,3;UBERON:0009663,8.28e-08,3;UBERON:0009661,8.28e-08,3;UBERON:0000125,8.28e-08,3;UBERON:0002308,8.28e-08,3;UBERON:0001948,2.80e-07,5;UBERON:0002315,2.80e-07,5;UBERON:0011216,3.74e-07,194;UBERON:0004733,7.10e-07,6;UBERON:0004732,7.10e-07,6;UBERON:0002028,7.10e-07,6;UBERON:0007277,7.10e-07,6 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.5072943780067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0,0,3.42781181284564,1.76694832761291,0.244981598429908,0.0958454710182364,0,11.0115880999389,20.42997409363,18.279177457493,0.131886287730194,0.365950574409639,0,14.2383329490704,6.75315132038016,5.65353516774197,3.83017161115768,2.98980529678116,0.559198337475902,0,0.151143120213571,0,0,0,0,0,0,0.561777680527007,0,0,0,0.704217098883403,0,0,0,0,0,0,0.68510327831436,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5401086924157,18.0124167859571,0,0,0,0,11.6836698735762,22.4175295381127,0.879580464790051,26.0736480288415,32.9872939956126,15.7918913865266,18.9822277789276,0,0,0,0,0,0,0,0.150704817835715,0.476255494059295,0.512454881139399,0.468508622798644,3.62184719034622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,8.83217783969334,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0,1.1270773567308,0,0,0.0701358198903186,0,0,0.31399745568275,0.370191491765402,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8807436590966,13.1277088983268,0,0,0,0,0,0,0,0,0,0,0,12.5315313404505,0.141940085208269,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0,0.608929898229199,0,0,0,0,0,0.120625849856312,0,0,0,11.8672193286726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0.0897138566094757,0,0,0,0,0,0,13.5540442228096,12.889106622201,22.9158205375759,14.6075204992134,31.5137959094495,32.4819375877571,33.7511250115903,26.1186297870048,24.9228324941313,33.6544202638683,0,0,0,0,0.209613162627982,0,0.44449345560323,0.206035057238894,0,0.252697211763798,0,0,0.0936415074698824,0.384150914429216,0.17230640686684,0,0,0.38581844092741,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0.188218760830661,0.25384382367503,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0,0.499621155875892,0.467863216890817,0.214871054048298,0.57386499620653,0.441182838239031,0 | |||
|short_description=p3@Atp2b2 | |||
}} |
Revision as of 22:29, 4 August 2015
Short description: | p3@Atp2b2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Atp2b2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 11bp_to_ENSMUST00000152831_5end |
EntrezGene: | 11941 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.42e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.42e-08 | 23 |
raphe nuclei neuron | 2.00e-08 | 3 |
neuron of the substantia nigra | 8.28e-08 | 3 |