FFCP PHASE1:Mm9::chr6:113451871..113451943,-: Difference between revisions
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{{FFCP|EntrezGene=210673|HGNC=|MCL_coexpression_id=1|UniProt=Q8BG44|association_with_transcript=0bp_to_ENSMUST00000057429,uc009dgq.1,uc009dgr.1,uc009dgs.1,uc009dgt.1_5end|description=CAGE_peak_1_at_Prrt3_5end|id=chr6:113451871..113451943,-|ontology_enrichment_celltype=CL:0000117!3.48e-13!23;CL:0000337!3.48e-13!23;CL:0000540!5.19e-12!33;CL:0000047!5.19e-12!33;CL:0000031!5.19e-12!33;CL:0000404!5.19e-12!33;CL:0000221!1.00e-10!44;CL:0000133!1.00e-10!44;CL:0002319!2.96e-10!43;CL:0000393!3.24e-08!39;CL:0000211!3.24e-08!39;CL:0000055!6.02e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,6.84e-18,23;CL:0000337,6.84e-18,23;CL:0000540,2.72e-11,33;CL:0000047,2.72e-11,33;CL:0000031,2.72e-11,33;CL:0000404,2.72e-11,33;CL:0000393,2.09e-08,39;CL:0000211,2.09e-08,39;CL:0000221,2.95e-08,44;CL:0000133,2.95e-08,44;CL:0002319,9.97e-08,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.62e-32!71;UBERON:0003075!1.62e-32!71;UBERON:0007284!1.62e-32!71;UBERON:0001017!5.08e-32!73;UBERON:0005743!5.08e-32!73;UBERON:0000073!7.94e-32!75;UBERON:0001016!7.94e-32!75;UBERON:0000033!1.75e-30!63;UBERON:0001049!1.22e-29!52;UBERON:0005068!1.22e-29!52;UBERON:0006241!1.22e-29!52;UBERON:0007135!1.22e-29!52;UBERON:0004121!2.62e-29!102;UBERON:0000924!2.62e-29!102;UBERON:0006601!2.62e-29!102;UBERON:0000955!1.20e-28!50;UBERON:0006238!1.20e-28!50;UBERON:0002616!6.18e-28!49;UBERON:0003056!6.44e-26!49;UBERON:0003080!1.61e-23!40;UBERON:0002780!9.13e-23!39;UBERON:0001890!9.13e-23!39;UBERON:0006240!9.13e-23!39;UBERON:0002020!5.42e-20!34;UBERON:0007811!5.27e-17!86;UBERON:0002791!6.33e-17!29;UBERON:0003528!6.33e-17!29;UBERON:0001893!6.33e-17!29;UBERON:0000153!3.63e-16!94;UBERON:0000956!4.64e-12!21;UBERON:0001869!4.64e-12!21;UBERON:0000203!4.64e-12!21;UBERON:0002619!2.18e-10!17;UBERON:0002021!6.26e-09!10;UBERON:0000411!6.26e-09!10;UBERON:0001950!6.26e-09!10;UBERON:0001894!9.36e-07!10;UBERON:0006222!9.36e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.08e-40,54;UBERON:0001049,2.38e-38,52;UBERON:0005068,2.38e-38,52;UBERON:0006241,2.38e-38,52;UBERON:0007135,2.38e-38,52;UBERON:0002346,5.63e-36,64;UBERON:0003075,5.63e-36,64;UBERON:0007284,5.63e-36,64;UBERON:0001017,6.91e-36,73;UBERON:0001016,2.24e-34,75;UBERON:0000955,1.33e-33,47;UBERON:0006238,1.33e-33,47;UBERON:0002616,1.23e-32,46;UBERON:0010371,4.08e-32,73;UBERON:0003056,1.13e-30,49;UBERON:0003080,1.25e-30,40;UBERON:0004121,1.46e-30,95;UBERON:0000924,1.46e-30,95;UBERON:0006601,1.46e-30,95;UBERON:0002780,1.41e-29,39;UBERON:0001890,1.41e-29,39;UBERON:0006240,1.41e-29,39;UBERON:0002020,1.10e-25,34;UBERON:0010314,1.88e-21,92;UBERON:0003528,2.10e-21,29;UBERON:0002791,2.10e-21,29;UBERON:0001893,2.10e-21,29;UBERON:0000956,1.22e-14,21;UBERON:0001869,1.22e-14,21;UBERON:0000203,1.22e-14,21;UBERON:0002619,2.82e-12,17;UBERON:0002021,6.48e-12,10;UBERON:0000411,6.48e-12,10;UBERON:0001950,6.48e-12,10;UBERON:0001894,7.22e-09,10;UBERON:0006222,7.22e-09,10;UBERON:0000025,1.50e-08,114;UBERON:0004111,3.05e-08,122;UBERON:0002420,5.64e-08,8;UBERON:0007245,5.64e-08,8;UBERON:0010009,5.64e-08,8;UBERON:0010011,5.64e-08,8;UBERON:0000454,5.64e-08,8;UBERON:0003076,6.64e-08,12;UBERON:0003057,6.64e-08,12;UBERON:0000007,5.51e-07,8;UBERON:0003296,5.51e-07,8;UBERON:0010133,5.51e-07,8|phase1_expression=5.76535849577258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.97354979238772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.439372365468944,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,7.08107613008592,11.1088105647127,8.23980824558033,0.338844532069132,0,0,0,0,0,1.92109152660777,2.38486108309499,1.4850653216486,1.26194976810829,18.2816630018434,16.565140571371,2.20483438586917,1.15014565221884,1.83843757322004,38.540558349786,37.41239005896,39.1696659803421,9.62769900430415,9.33173964744578,7.8137005583514,35.4562408731754,18.5711661310454,21.697351184307,12.6690291753677,10.8202477407318,8.57437450796383,0.227178579999552,0.226714680320357,0.289864488701678,0,0,0,0,0,3.7919993435573,0,0,0,7.32385782838739,0,0,0,0,0,0,1.48439043634778,0,0.148442139064825,0.867426633830679,0.913396434936424,0.461230994512117,0.150722640552623,0.352766121407114,0.251333182659351,0,0,0,0.161766849947409,0,0,0,43.331557957709,32.0453461424586,0,0,0,0,36.6987066541816,32.9400434029411,11.3088916901578,52.3211203778752,51.1430914660661,37.6096360652804,36.5042841902455,0.101839363850316,0,0,1.05220927943237,0.780722657776222,0.459804208866946,0.720248519221397,1.05493372485001,2.04109497453984,1.66547836370305,2.34254311399322,4.39795730256327,0.646703978798527,0.378212160335639,0,0.657587197282725,0.556094498451196,0,0.205782136407943,0.398068533636986,0,0,0,0,0.234526059981096,0,0,0,0,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0,41.2168299185689,5.76265829323993,0,0,0.213288250535234,0.696710015581316,0.128867461322093,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0.569003702859245,0.456994050438915,0,0.203651327845314,0.193952487167626,0.420814919341911,0,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:210673 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BG44 | |||
|association_with_transcript=0bp_to_ENSMUST00000057429,uc009dgq.1,uc009dgr.1,uc009dgs.1,uc009dgt.1_5end | |||
|cluster_id=chr6:113451871..113451943,- | |||
|description=CAGE_peak_1_at_Prrt3_5end | |||
|id=chr6:113451871..113451943,- | |||
|ontology_enrichment_celltype=CL:0000117!3.48e-13!23;CL:0000337!3.48e-13!23;CL:0000540!5.19e-12!33;CL:0000047!5.19e-12!33;CL:0000031!5.19e-12!33;CL:0000404!5.19e-12!33;CL:0000221!1.00e-10!44;CL:0000133!1.00e-10!44;CL:0002319!2.96e-10!43;CL:0000393!3.24e-08!39;CL:0000211!3.24e-08!39;CL:0000055!6.02e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.84e-18,23;CL:0000337,6.84e-18,23;CL:0000540,2.72e-11,33;CL:0000047,2.72e-11,33;CL:0000031,2.72e-11,33;CL:0000404,2.72e-11,33;CL:0000393,2.09e-08,39;CL:0000211,2.09e-08,39;CL:0000221,2.95e-08,44;CL:0000133,2.95e-08,44;CL:0002319,9.97e-08,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.62e-32!71;UBERON:0003075!1.62e-32!71;UBERON:0007284!1.62e-32!71;UBERON:0001017!5.08e-32!73;UBERON:0005743!5.08e-32!73;UBERON:0000073!7.94e-32!75;UBERON:0001016!7.94e-32!75;UBERON:0000033!1.75e-30!63;UBERON:0001049!1.22e-29!52;UBERON:0005068!1.22e-29!52;UBERON:0006241!1.22e-29!52;UBERON:0007135!1.22e-29!52;UBERON:0004121!2.62e-29!102;UBERON:0000924!2.62e-29!102;UBERON:0006601!2.62e-29!102;UBERON:0000955!1.20e-28!50;UBERON:0006238!1.20e-28!50;UBERON:0002616!6.18e-28!49;UBERON:0003056!6.44e-26!49;UBERON:0003080!1.61e-23!40;UBERON:0002780!9.13e-23!39;UBERON:0001890!9.13e-23!39;UBERON:0006240!9.13e-23!39;UBERON:0002020!5.42e-20!34;UBERON:0007811!5.27e-17!86;UBERON:0002791!6.33e-17!29;UBERON:0003528!6.33e-17!29;UBERON:0001893!6.33e-17!29;UBERON:0000153!3.63e-16!94;UBERON:0000956!4.64e-12!21;UBERON:0001869!4.64e-12!21;UBERON:0000203!4.64e-12!21;UBERON:0002619!2.18e-10!17;UBERON:0002021!6.26e-09!10;UBERON:0000411!6.26e-09!10;UBERON:0001950!6.26e-09!10;UBERON:0001894!9.36e-07!10;UBERON:0006222!9.36e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.08e-40,54;UBERON:0001049,2.38e-38,52;UBERON:0005068,2.38e-38,52;UBERON:0006241,2.38e-38,52;UBERON:0007135,2.38e-38,52;UBERON:0002346,5.63e-36,64;UBERON:0003075,5.63e-36,64;UBERON:0007284,5.63e-36,64;UBERON:0001017,6.91e-36,73;UBERON:0001016,2.24e-34,75;UBERON:0000955,1.33e-33,47;UBERON:0006238,1.33e-33,47;UBERON:0002616,1.23e-32,46;UBERON:0010371,4.08e-32,73;UBERON:0003056,1.13e-30,49;UBERON:0003080,1.25e-30,40;UBERON:0004121,1.46e-30,95;UBERON:0000924,1.46e-30,95;UBERON:0006601,1.46e-30,95;UBERON:0002780,1.41e-29,39;UBERON:0001890,1.41e-29,39;UBERON:0006240,1.41e-29,39;UBERON:0002020,1.10e-25,34;UBERON:0010314,1.88e-21,92;UBERON:0003528,2.10e-21,29;UBERON:0002791,2.10e-21,29;UBERON:0001893,2.10e-21,29;UBERON:0000956,1.22e-14,21;UBERON:0001869,1.22e-14,21;UBERON:0000203,1.22e-14,21;UBERON:0002619,2.82e-12,17;UBERON:0002021,6.48e-12,10;UBERON:0000411,6.48e-12,10;UBERON:0001950,6.48e-12,10;UBERON:0001894,7.22e-09,10;UBERON:0006222,7.22e-09,10;UBERON:0000025,1.50e-08,114;UBERON:0004111,3.05e-08,122;UBERON:0002420,5.64e-08,8;UBERON:0007245,5.64e-08,8;UBERON:0010009,5.64e-08,8;UBERON:0010011,5.64e-08,8;UBERON:0000454,5.64e-08,8;UBERON:0003076,6.64e-08,12;UBERON:0003057,6.64e-08,12;UBERON:0000007,5.51e-07,8;UBERON:0003296,5.51e-07,8;UBERON:0010133,5.51e-07,8 | |||
|phase1_expression=5.76535849577258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.97354979238772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.439372365468944,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,7.08107613008592,11.1088105647127,8.23980824558033,0.338844532069132,0,0,0,0,0,1.92109152660777,2.38486108309499,1.4850653216486,1.26194976810829,18.2816630018434,16.565140571371,2.20483438586917,1.15014565221884,1.83843757322004,38.540558349786,37.41239005896,39.1696659803421,9.62769900430415,9.33173964744578,7.8137005583514,35.4562408731754,18.5711661310454,21.697351184307,12.6690291753677,10.8202477407318,8.57437450796383,0.227178579999552,0.226714680320357,0.289864488701678,0,0,0,0,0,3.7919993435573,0,0,0,7.32385782838739,0,0,0,0,0,0,1.48439043634778,0,0.148442139064825,0.867426633830679,0.913396434936424,0.461230994512117,0.150722640552623,0.352766121407114,0.251333182659351,0,0,0,0.161766849947409,0,0,0,43.331557957709,32.0453461424586,0,0,0,0,36.6987066541816,32.9400434029411,11.3088916901578,52.3211203778752,51.1430914660661,37.6096360652804,36.5042841902455,0.101839363850316,0,0,1.05220927943237,0.780722657776222,0.459804208866946,0.720248519221397,1.05493372485001,2.04109497453984,1.66547836370305,2.34254311399322,4.39795730256327,0.646703978798527,0.378212160335639,0,0.657587197282725,0.556094498451196,0,0.205782136407943,0.398068533636986,0,0,0,0,0.234526059981096,0,0,0,0,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0,41.2168299185689,5.76265829323993,0,0,0.213288250535234,0.696710015581316,0.128867461322093,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0.569003702859245,0.456994050438915,0,0.203651327845314,0.193952487167626,0.420814919341911,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,34.8394780273509,33.2881189921857,0,0,0.94652465824877,0.390438744296638,0.646270193198397,0,0.445597348164788,0.283076530788832,0.809621403349789,0,0.395287777946524,20.5645642509957,0,0.534196811001766,0.325773918707152,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0.363533729477506,0,0.316036757935816,0,0,23.4903327970114,1.98067203434441,3.23396709456886,4.92975180572662,7.44828981297549,7.13475270408282,8.39200005070817,11.8741330154694,0.938686832254841,0,0.220528398054962,0,0,0.180938774784468,0,0,0,36.3433591940599,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0.203319467126849,0.432021363287205,0.209088296014469,0.436725127492355,0.134864346384821,0.330613822901344,0,0,0,0,0.299033092087958,0.165458490457098,1.36115831840833,0.516639293910924,0.506868376472335,0.117357238645754,0.39061315453185,0.838874755405687,0,0.576060012515731,0,1.62180172232131,0.410843828659309,0.129920822977795,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.3096510945995,37.7466693935885,40.6755814541972,34.0269301040501,41.1049511862385,41.5466643564335,43.2014400148356,40.0785870869556,45.7673833074047,42.4563455636492,0.31136204275253,1.99512436700516,1.87806966329548,2.18796045361465,0.628839487883947,0.919217542250071,2.66696073361938,1.64828045791115,3.85103051510178,1.01078884705519,1.2673964994512,1.13175804831646,1.87283014939765,1.72867911493147,1.55075766180156,1.90517476513229,1.0429589335037,1.92909220463705,0,1.17759136107518,1.37147700954166,0.70990322463735,1.90748951957857,0.872078499793971,1.59985946706062,1.09998990259179,1.09756783723664,1.31534855718921,1.49384525230448,2.24456908663095,0.830445126869219,1.37906275325789,1.63692417267876,1.85924209423159,1.73615949883027,5.24602213669686,1.16965804222704,1.50409737833809,1.14772999241306,1.54413993383661,1.15933917810211 | |||
|short_description=p1@Prrt3 | |||
}} |
Revision as of 22:11, 4 August 2015
Short description: | p1@Prrt3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Prrt3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000057429, uc009dgq.1, uc009dgr.1, uc009dgs.1, uc009dgt.1_5end |
EntrezGene: | 210673 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.84e-18 | 23 |
neuroblast (sensu Vertebrata) | 6.84e-18 | 23 |
neuron | 2.72e-11 | 33 |
neuronal stem cell | 2.72e-11 | 33 |
neuroblast | 2.72e-11 | 33 |
electrically signaling cell | 2.72e-11 | 33 |
electrically responsive cell | 2.09e-08 | 39 |
electrically active cell | 2.09e-08 | 39 |
ectodermal cell | 2.95e-08 | 44 |
neurectodermal cell | 2.95e-08 | 44 |
neural cell | 9.97e-08 | 43 |