FFCP PHASE1:Mm9::chr4:132595397..132595410,+: Difference between revisions
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{{FFCP|EntrezGene=230793|HGNC=|MCL_coexpression_id=97|UniProt=Q6PAL7|association_with_transcript=0bp_to_ENSMUST00000105914_5end|description=CAGE_peak_12_at_Ahdc1_5end|id=chr4:132595397..132595410,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000349,4.98e-22,3;CL:0000351,4.98e-22,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003133!6.16e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000358,4.98e-22,3;UBERON:0000307,4.98e-22,3;UBERON:0007010,4.98e-22,3;UBERON:0001987,1.44e-14,2;UBERON:0003124,1.44e-14,2;UBERON:0004340,1.44e-14,2;UBERON:0005631,5.01e-10,3;UBERON:0000478,5.01e-10,3;UBERON:0000158,5.01e-10,3;UBERON:0003133,7.41e-10,24;UBERON:0005156,4.47e-09,26;UBERON:0000990,4.47e-09,26;UBERON:0000473,6.08e-08,14;UBERON:0005795,9.75e-08,4;UBERON:0000995,9.75e-08,4;UBERON:0003135,1.99e-07,15;UBERON:0003101,5.64e-07,16;UBERON:0000079,5.64e-07,16|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,1.77858959222228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0,0.520455980298408,0.304465478312141,0,0,0,0,0.494389935468748,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0,0,0.12811372028485,0,0,0.646703978798527,0.378212160335639,0,0.219195732427575,0,0.696504333044333,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0.379419222745544,0,0.156998727841375,0.370191491765402,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.339490171550376,1.40814148973101,0.167506257441816,0,0.390267295715598,0,0,0,0,0,0.144649058581512,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0.302323556964751,0,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.129358683782755,0.428674070063185,0.354680467284547,1.24858172321449,0.329098041204242,0.608929898229199,3.28540391289194,1.27099242518292,0,0,0,0.120625849856312,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0,0,0,0,0,0,0,0.129614973291793,0,1.12738587736838,1.49516546043979,0.992750942742586,0.194451188344048,0,0,0,0.2604087696879,0.314578033277133,1.69108884578204,1.44015003128933,0,0.608175645870493,0.308132871494482,0.25984164595559,0.537080087002444,0.39736270956253,0.240390899039938,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0,0,0.226730383615211,6.21560669447381,5.38283139656854,3.35769232728157,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0.207574695168353,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0.187283014939765,0.128050304809739,0.0574354689556133,0,0.347652977834566,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0,0.169229215783353,0,0,0.271608227691724,0.561142271657738,0,0.197008964751127,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p12@Ahdc1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:230793 | |||
|HGNC= | |||
|MCL_coexpression_id=97 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q6PAL7 | |||
|association_with_transcript=0bp_to_ENSMUST00000105914_5end | |||
|cluster_id=chr4:132595397..132595410,+ | |||
|description=CAGE_peak_12_at_Ahdc1_5end | |||
|id=chr4:132595397..132595410,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.98e-22,3;CL:0000351,4.98e-22,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003133!6.16e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,4.98e-22,3;UBERON:0000307,4.98e-22,3;UBERON:0007010,4.98e-22,3;UBERON:0001987,1.44e-14,2;UBERON:0003124,1.44e-14,2;UBERON:0004340,1.44e-14,2;UBERON:0005631,5.01e-10,3;UBERON:0000478,5.01e-10,3;UBERON:0000158,5.01e-10,3;UBERON:0003133,7.41e-10,24;UBERON:0005156,4.47e-09,26;UBERON:0000990,4.47e-09,26;UBERON:0000473,6.08e-08,14;UBERON:0005795,9.75e-08,4;UBERON:0000995,9.75e-08,4;UBERON:0003135,1.99e-07,15;UBERON:0003101,5.64e-07,16;UBERON:0000079,5.64e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,1.77858959222228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0,0.520455980298408,0.304465478312141,0,0,0,0,0.494389935468748,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0,0,0.12811372028485,0,0,0.646703978798527,0.378212160335639,0,0.219195732427575,0,0.696504333044333,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0.379419222745544,0,0.156998727841375,0.370191491765402,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.339490171550376,1.40814148973101,0.167506257441816,0,0.390267295715598,0,0,0,0,0,0.144649058581512,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0.302323556964751,0,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.129358683782755,0.428674070063185,0.354680467284547,1.24858172321449,0.329098041204242,0.608929898229199,3.28540391289194,1.27099242518292,0,0,0,0.120625849856312,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0,0,0,0,0,0,0,0.129614973291793,0,1.12738587736838,1.49516546043979,0.992750942742586,0.194451188344048,0,0,0,0.2604087696879,0.314578033277133,1.69108884578204,1.44015003128933,0,0.608175645870493,0.308132871494482,0.25984164595559,0.537080087002444,0.39736270956253,0.240390899039938,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0,0,0.226730383615211,6.21560669447381,5.38283139656854,3.35769232728157,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0.207574695168353,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0.187283014939765,0.128050304809739,0.0574354689556133,0,0.347652977834566,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0,0.169229215783353,0,0,0.271608227691724,0.561142271657738,0,0.197008964751127,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p12@Ahdc1 | |||
}} |
Revision as of 21:23, 4 August 2015
Short description: | p12@Ahdc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Ahdc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:97 |
Association with transcript: | 0bp_to_ENSMUST00000105914_5end |
EntrezGene: | 230793 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.98e-22 | 3 |
trophoblast cell | 4.98e-22 | 3 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 4.98e-22 | 3 |
blastula | 4.98e-22 | 3 |
cleaving embryo | 4.98e-22 | 3 |
placenta | 1.44e-14 | 2 |
chorion | 1.44e-14 | 2 |
allantois | 1.44e-14 | 2 |
extraembryonic membrane | 5.01e-10 | 3 |
extraembryonic structure | 5.01e-10 | 3 |
membranous layer | 5.01e-10 | 3 |
reproductive organ | 7.41e-10 | 24 |
reproductive structure | 4.47e-09 | 26 |
reproductive system | 4.47e-09 | 26 |
testis | 6.08e-08 | 14 |
embryonic uterus | 9.75e-08 | 4 |
uterus | 9.75e-08 | 4 |
male reproductive organ | 1.99e-07 | 15 |
male organism | 5.64e-07 | 16 |
male reproductive system | 5.64e-07 | 16 |