FFCP PHASE1:Mm9::chr2:25323618..25323633,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=234|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:25323618..25323633,+|id=chr2:25323618..25323633,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002614,6.51e-12,3;CL:0002610,1.38e-10,3;CL:0000117,2.34e-08,23;CL:0000337,2.34e-08,23;CL:0002319,1.50e-07,43;CL:0000878,2.45e-07,2;CL:0000129,2.45e-07,2;CL:0000221,2.48e-07,44;CL:0000133,2.48e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!5.21e-27!63;UBERON:0000955!3.64e-23!50;UBERON:0006238!3.64e-23!50;UBERON:0001049!2.88e-22!52;UBERON:0005068!2.88e-22!52;UBERON:0006241!2.88e-22!52;UBERON:0007135!2.88e-22!52;UBERON:0002616!3.27e-22!49;UBERON:0001017!4.13e-22!73;UBERON:0005743!4.13e-22!73;UBERON:0000073!4.20e-22!75;UBERON:0001016!4.20e-22!75;UBERON:0004121!1.66e-20!102;UBERON:0000924!1.66e-20!102;UBERON:0006601!1.66e-20!102;UBERON:0002346!3.80e-20!71;UBERON:0003075!3.80e-20!71;UBERON:0007284!3.80e-20!71;UBERON:0003056!7.10e-17!49;UBERON:0007811!1.07e-16!86;UBERON:0000153!4.57e-14!94;UBERON:0003080!1.19e-13!40;UBERON:0002780!9.25e-13!39;UBERON:0001890!9.25e-13!39;UBERON:0006240!9.25e-13!39;UBERON:0002020!1.04e-11!34;UBERON:0003076!5.66e-10!12;UBERON:0003057!5.66e-10!12;UBERON:0002021!1.63e-09!10;UBERON:0000411!1.63e-09!10;UBERON:0001950!1.63e-09!10;UBERON:0002791!1.81e-09!29;UBERON:0003528!1.81e-09!29;UBERON:0001893!1.81e-09!29;UBERON:0002619!3.76e-09!17;UBERON:0002298!1.12e-08!6;UBERON:0000025!1.70e-08!114;UBERON:0004111!2.39e-08!122;UBERON:0000956!5.16e-08!21;UBERON:0001869!5.16e-08!21;UBERON:0000203!5.16e-08!21;UBERON:0004733!1.24e-07!6;UBERON:0004732!1.24e-07!6;UBERON:0002028!1.24e-07!6;UBERON:0007277!1.24e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.58e-26,54;UBERON:0001017,1.72e-24,73;UBERON:0001016,1.01e-23,75;UBERON:0002616,1.64e-20,46;UBERON:0000955,5.34e-20,47;UBERON:0006238,5.34e-20,47;UBERON:0001049,6.96e-20,52;UBERON:0005068,6.96e-20,52;UBERON:0006241,6.96e-20,52;UBERON:0007135,6.96e-20,52;UBERON:0004121,8.46e-18,95;UBERON:0000924,8.46e-18,95;UBERON:0006601,8.46e-18,95;UBERON:0002346,1.89e-15,64;UBERON:0003075,1.89e-15,64;UBERON:0007284,1.89e-15,64;UBERON:0002950,8.26e-15,4;UBERON:0001891,8.26e-15,4;UBERON:0009616,8.26e-15,4;UBERON:0010286,8.26e-15,4;UBERON:0004733,4.97e-14,6;UBERON:0004732,4.97e-14,6;UBERON:0002028,4.97e-14,6;UBERON:0007277,4.97e-14,6;UBERON:0010371,4.43e-13,73;UBERON:0003080,6.45e-12,40;UBERON:0002038,6.51e-12,3;UBERON:0009663,6.51e-12,3;UBERON:0009661,6.51e-12,3;UBERON:0000125,6.51e-12,3;UBERON:0002308,6.51e-12,3;UBERON:0002021,8.92e-12,10;UBERON:0000411,8.92e-12,10;UBERON:0001950,8.92e-12,10;UBERON:0004684,1.38e-10,3;UBERON:0002275,1.38e-10,3;UBERON:0002780,2.19e-10,39;UBERON:0001890,2.19e-10,39;UBERON:0006240,2.19e-10,39;UBERON:0003528,3.37e-10,29;UBERON:0002791,3.37e-10,29;UBERON:0001893,3.37e-10,29;UBERON:0002020,3.46e-10,34;UBERON:0010314,1.35e-09,92;UBERON:0003076,1.59e-09,12;UBERON:0003057,1.59e-09,12;UBERON:0003056,2.90e-09,49;UBERON:0002037,4.23e-08,4;UBERON:0002680,4.23e-08,4;UBERON:0001895,4.23e-08,4;UBERON:0010092,4.23e-08,4;UBERON:0006215,4.23e-08,4;UBERON:0000025,5.02e-08,114;UBERON:0001896,7.23e-08,2;UBERON:0002298,7.23e-08,2;UBERON:0005290,7.23e-08,2;UBERON:0010096,7.23e-08,2;UBERON:0004111,3.07e-07,122;UBERON:0000956,5.95e-07,21;UBERON:0001869,5.95e-07,21;UBERON:0000203,5.95e-07,21|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,0.218025156380447,0,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,0,0,1.26766280701236,0,0,0,0,0,1.79760066311043,1.53687322128622,0,0,0,0.285650984403804,1.32521124570968,0.122490799214954,0,0,4.40463523997555,2.42605942361857,1.0752457327937,0,0,0,7.81712397203867,18.0084035210138,12.3766580699216,0.294628585473668,0,0.372798891650601,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46390398505774,2.30391377494801,0,0,0,0,1.9472783122627,0.915001205637253,0,1.04294592115366,2.81287003063364,0.20778804455956,2.27137768294861,0,0,2.52722758433675,0.210441855886474,0,0,0.180062129805349,0.150704817835715,0.204109497453984,0.2562274405697,0.374806898238915,0.776110112217047,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0.590292695242212,0.308534225774757,0.232533944750408,0.268273401399619,0.350296027101508,0,0.164167464079095,0,0,0,0.268412837520744,0.630869845692382,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72936002979246,2.69586879162067,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.428674070063185,0.354680467284547,1.60531935841864,0.822745103010605,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0.149516546043979,0.496375471371293,0.194451188344048,0.387479470433193,0.506868376472335,0.352071715937262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0,3.09335728218638,3.42541259885321,4.5323633843382,1.35004500046361,0.900642406448441,2.71885445390523,0.51776031175182,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.280924522409647,0,0,0.476293691283074,0,0,0,0.147198920134397,0,0,0,0,0,0.338458431566706,0.182927972872773,0.263069711437843,0,0,0,0,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p@chr2:25323618..25323633,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=234 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:25323618..25323633,+ | |||
|description=CAGE_peak_at_chr2:25323618..25323633,+ | |||
|id=chr2:25323618..25323633,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,6.51e-12,3;CL:0002610,1.38e-10,3;CL:0000117,2.34e-08,23;CL:0000337,2.34e-08,23;CL:0002319,1.50e-07,43;CL:0000878,2.45e-07,2;CL:0000129,2.45e-07,2;CL:0000221,2.48e-07,44;CL:0000133,2.48e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!5.21e-27!63;UBERON:0000955!3.64e-23!50;UBERON:0006238!3.64e-23!50;UBERON:0001049!2.88e-22!52;UBERON:0005068!2.88e-22!52;UBERON:0006241!2.88e-22!52;UBERON:0007135!2.88e-22!52;UBERON:0002616!3.27e-22!49;UBERON:0001017!4.13e-22!73;UBERON:0005743!4.13e-22!73;UBERON:0000073!4.20e-22!75;UBERON:0001016!4.20e-22!75;UBERON:0004121!1.66e-20!102;UBERON:0000924!1.66e-20!102;UBERON:0006601!1.66e-20!102;UBERON:0002346!3.80e-20!71;UBERON:0003075!3.80e-20!71;UBERON:0007284!3.80e-20!71;UBERON:0003056!7.10e-17!49;UBERON:0007811!1.07e-16!86;UBERON:0000153!4.57e-14!94;UBERON:0003080!1.19e-13!40;UBERON:0002780!9.25e-13!39;UBERON:0001890!9.25e-13!39;UBERON:0006240!9.25e-13!39;UBERON:0002020!1.04e-11!34;UBERON:0003076!5.66e-10!12;UBERON:0003057!5.66e-10!12;UBERON:0002021!1.63e-09!10;UBERON:0000411!1.63e-09!10;UBERON:0001950!1.63e-09!10;UBERON:0002791!1.81e-09!29;UBERON:0003528!1.81e-09!29;UBERON:0001893!1.81e-09!29;UBERON:0002619!3.76e-09!17;UBERON:0002298!1.12e-08!6;UBERON:0000025!1.70e-08!114;UBERON:0004111!2.39e-08!122;UBERON:0000956!5.16e-08!21;UBERON:0001869!5.16e-08!21;UBERON:0000203!5.16e-08!21;UBERON:0004733!1.24e-07!6;UBERON:0004732!1.24e-07!6;UBERON:0002028!1.24e-07!6;UBERON:0007277!1.24e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.58e-26,54;UBERON:0001017,1.72e-24,73;UBERON:0001016,1.01e-23,75;UBERON:0002616,1.64e-20,46;UBERON:0000955,5.34e-20,47;UBERON:0006238,5.34e-20,47;UBERON:0001049,6.96e-20,52;UBERON:0005068,6.96e-20,52;UBERON:0006241,6.96e-20,52;UBERON:0007135,6.96e-20,52;UBERON:0004121,8.46e-18,95;UBERON:0000924,8.46e-18,95;UBERON:0006601,8.46e-18,95;UBERON:0002346,1.89e-15,64;UBERON:0003075,1.89e-15,64;UBERON:0007284,1.89e-15,64;UBERON:0002950,8.26e-15,4;UBERON:0001891,8.26e-15,4;UBERON:0009616,8.26e-15,4;UBERON:0010286,8.26e-15,4;UBERON:0004733,4.97e-14,6;UBERON:0004732,4.97e-14,6;UBERON:0002028,4.97e-14,6;UBERON:0007277,4.97e-14,6;UBERON:0010371,4.43e-13,73;UBERON:0003080,6.45e-12,40;UBERON:0002038,6.51e-12,3;UBERON:0009663,6.51e-12,3;UBERON:0009661,6.51e-12,3;UBERON:0000125,6.51e-12,3;UBERON:0002308,6.51e-12,3;UBERON:0002021,8.92e-12,10;UBERON:0000411,8.92e-12,10;UBERON:0001950,8.92e-12,10;UBERON:0004684,1.38e-10,3;UBERON:0002275,1.38e-10,3;UBERON:0002780,2.19e-10,39;UBERON:0001890,2.19e-10,39;UBERON:0006240,2.19e-10,39;UBERON:0003528,3.37e-10,29;UBERON:0002791,3.37e-10,29;UBERON:0001893,3.37e-10,29;UBERON:0002020,3.46e-10,34;UBERON:0010314,1.35e-09,92;UBERON:0003076,1.59e-09,12;UBERON:0003057,1.59e-09,12;UBERON:0003056,2.90e-09,49;UBERON:0002037,4.23e-08,4;UBERON:0002680,4.23e-08,4;UBERON:0001895,4.23e-08,4;UBERON:0010092,4.23e-08,4;UBERON:0006215,4.23e-08,4;UBERON:0000025,5.02e-08,114;UBERON:0001896,7.23e-08,2;UBERON:0002298,7.23e-08,2;UBERON:0005290,7.23e-08,2;UBERON:0010096,7.23e-08,2;UBERON:0004111,3.07e-07,122;UBERON:0000956,5.95e-07,21;UBERON:0001869,5.95e-07,21;UBERON:0000203,5.95e-07,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,0.218025156380447,0,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,0,0,1.26766280701236,0,0,0,0,0,1.79760066311043,1.53687322128622,0,0,0,0.285650984403804,1.32521124570968,0.122490799214954,0,0,4.40463523997555,2.42605942361857,1.0752457327937,0,0,0,7.81712397203867,18.0084035210138,12.3766580699216,0.294628585473668,0,0.372798891650601,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46390398505774,2.30391377494801,0,0,0,0,1.9472783122627,0.915001205637253,0,1.04294592115366,2.81287003063364,0.20778804455956,2.27137768294861,0,0,2.52722758433675,0.210441855886474,0,0,0.180062129805349,0.150704817835715,0.204109497453984,0.2562274405697,0.374806898238915,0.776110112217047,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0.590292695242212,0.308534225774757,0.232533944750408,0.268273401399619,0.350296027101508,0,0.164167464079095,0,0,0,0.268412837520744,0.630869845692382,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72936002979246,2.69586879162067,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.428674070063185,0.354680467284547,1.60531935841864,0.822745103010605,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0.149516546043979,0.496375471371293,0.194451188344048,0.387479470433193,0.506868376472335,0.352071715937262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0,3.09335728218638,3.42541259885321,4.5323633843382,1.35004500046361,0.900642406448441,2.71885445390523,0.51776031175182,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.280924522409647,0,0,0.476293691283074,0,0,0,0.147198920134397,0,0,0,0,0,0.338458431566706,0.182927972872773,0.263069711437843,0,0,0,0,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p@chr2:25323618..25323633,+ | |||
}} |
Latest revision as of 20:48, 4 August 2015
Short description: | p@chr2:25323618..25323633, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:25323618..25323633, + |
Coexpression cluster: | MCL_coexpression_mm9:234 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 6.51e-12 | 3 |
raphe nuclei neuron | 1.38e-10 | 3 |
CNS neuron (sensu Vertebrata) | 2.34e-08 | 23 |
neuroblast (sensu Vertebrata) | 2.34e-08 | 23 |
neural cell | 1.50e-07 | 43 |
central nervous system macrophage | 2.45e-07 | 2 |
microglial cell | 2.45e-07 | 2 |
ectodermal cell | 2.48e-07 | 44 |
neurectodermal cell | 2.48e-07 | 44 |