FFCP PHASE1:Mm9::chr10:79792706..79792732,+: Difference between revisions
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{{FFCP|EntrezGene=70335|HGNC=|MCL_coexpression_id=0|UniProt=Q9JM62,D3YTR2,D3YTR1|association_with_transcript=8bp_to_ENSMUST00000105354,ENSMUST00000105355,ENSMUST00000105357,ENSMUST00000105358_5end|description=CAGE_peak_2_at_Reep6_5end|id=chr10:79792706..79792732,+|ontology_enrichment_celltype=CL:0000117!2.93e-11!23;CL:0000337!2.93e-11!23|ontology_enrichment_celltype_v019_2=CL:0000117,5.58e-10,23;CL:0000337,5.58e-10,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!9.22e-18!34;UBERON:0001049!4.90e-17!52;UBERON:0005068!4.90e-17!52;UBERON:0006241!4.90e-17!52;UBERON:0007135!4.90e-17!52;UBERON:0002791!1.08e-15!29;UBERON:0003528!1.08e-15!29;UBERON:0001893!1.08e-15!29;UBERON:0000955!1.79e-15!50;UBERON:0006238!1.79e-15!50;UBERON:0003080!2.81e-15!40;UBERON:0002616!6.01e-15!49;UBERON:0002780!1.17e-14!39;UBERON:0001890!1.17e-14!39;UBERON:0006240!1.17e-14!39;UBERON:0003056!4.28e-13!49;UBERON:0000033!9.95e-13!63;UBERON:0001017!1.37e-12!73;UBERON:0005743!1.37e-12!73;UBERON:0000073!4.34e-12!75;UBERON:0001016!4.34e-12!75;UBERON:0002346!3.57e-11!71;UBERON:0003075!3.57e-11!71;UBERON:0007284!3.57e-11!71;UBERON:0000956!5.69e-11!21;UBERON:0001869!5.69e-11!21;UBERON:0000203!5.69e-11!21;UBERON:0002619!8.31e-09!17;UBERON:0004121!1.12e-08!102;UBERON:0000924!1.12e-08!102;UBERON:0006601!1.12e-08!102;UBERON:0002021!2.46e-08!10;UBERON:0000411!2.46e-08!10;UBERON:0001950!2.46e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0003528,1.03e-31,29;UBERON:0002791,1.03e-31,29;UBERON:0001893,1.03e-31,29;UBERON:0002020,1.05e-28,34;UBERON:0003080,1.17e-28,40;UBERON:0000073,2.33e-27,54;UBERON:0002780,5.04e-27,39;UBERON:0001890,5.04e-27,39;UBERON:0006240,5.04e-27,39;UBERON:0002616,3.37e-26,46;UBERON:0000955,1.66e-25,47;UBERON:0006238,1.66e-25,47;UBERON:0001049,2.53e-24,52;UBERON:0005068,2.53e-24,52;UBERON:0006241,2.53e-24,52;UBERON:0007135,2.53e-24,52;UBERON:0003056,2.90e-22,49;UBERON:0001017,1.28e-21,73;UBERON:0002021,1.62e-21,10;UBERON:0000411,1.62e-21,10;UBERON:0001950,1.62e-21,10;UBERON:0000956,4.34e-21,21;UBERON:0001869,4.34e-21,21;UBERON:0000203,4.34e-21,21;UBERON:0001016,7.52e-21,75;UBERON:0002346,1.53e-18,64;UBERON:0003075,1.53e-18,64;UBERON:0007284,1.53e-18,64;UBERON:0002619,2.94e-17,17;UBERON:0010371,1.85e-15,73;UBERON:0004121,6.06e-15,95;UBERON:0000924,6.06e-15,95;UBERON:0006601,6.06e-15,95;UBERON:0002420,1.15e-11,8;UBERON:0007245,1.15e-11,8;UBERON:0010009,1.15e-11,8;UBERON:0010011,1.15e-11,8;UBERON:0000454,1.15e-11,8;UBERON:0010314,5.95e-11,92;UBERON:0000369,4.48e-10,5;UBERON:0002435,4.48e-10,5;UBERON:0000204,4.48e-10,5;UBERON:0010082,4.48e-10,5;UBERON:0000025,1.40e-08,114;UBERON:0004111,1.34e-07,122|phase1_expression=0.160148847104794,0,0,0.30246421130683,0,0,0,0,0,0,0,0.239316476986009,0,0,0,0.404950534779652,0.699561878128147,0,0,0,57.9995238830296,0,0.261199789138935,0,0,0,0,0,0.190023419456374,0,0,0.635030673459631,0.61506478758457,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,1.5869729378161,1.26766280701236,0,0,0.449949858640699,0,0,0,0,1.34796496001021,1.08004750665353,0.630974884054146,0.856952953211411,0.441737081903227,0.857435594504678,0.766763768145891,0.919218786610021,0,1.40456071893706,2.30409799884365,1.18697658957174,1.46380229763855,1.04182674111352,0.837548997004143,1.12552522006336,1.98637722109853,0.589257170947335,0.711858403995515,1.1183966749518,0.151452386666368,0,0,0,0,0,0,0,8.28622078777336,0,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0,6.73684890342454,0,0,0,0,0.230615497256059,0,0,0.251333182659351,0,0,0,0.161766849947409,0,0,0,0.878342391034642,0,0,0,0,0,1.64769703345305,2.74500361691176,1.88481528169297,4.34560800480691,4.60287823194595,2.28566849015516,2.27137768294861,0.101839363850316,0.248813941220186,9.60346482047964,0,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0.2562274405697,0.281105173679186,0.258703370739016,0.215567992932842,0.189106080167819,0.527853372491847,0,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0.492502392237286,0.243206428637567,0.292399974850665,0,0.402619256281115,2.94405927989778,2.88132914661996,0,0,0.213288250535234,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0.898819408654221,0.648414149624083,0.199141273254367,0,0.456994050438915,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,0.296452627087149,0.333690211432188,0.393117990226406,0.449724224769707,0.608580364165509,0.241177159752417,0,0,0,0.549122826376163,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,1.12385412991454,0.703270119553219,0.163934945376675,0.252470927204373,0,0,0,0.238968797952552,0,0,0,0,0,0.963963949265421,0,0.178065603667255,0,0.164970122972535,0,0,0.604647113929502,0.188605079755898,0,0.614870295887855,0,0.363533729477506,0.356497378384721,0,0,0,0.680879211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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:70335 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9JM62,uniprot:D3YTR2,uniprot:D3YTR1 | |||
|association_with_transcript=8bp_to_ENSMUST00000105354,ENSMUST00000105355,ENSMUST00000105357,ENSMUST00000105358_5end | |||
|cluster_id=chr10:79792706..79792732,+ | |||
|description=CAGE_peak_2_at_Reep6_5end | |||
|id=chr10:79792706..79792732,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.93e-11!23;CL:0000337!2.93e-11!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.58e-10,23;CL:0000337,5.58e-10,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!9.22e-18!34;UBERON:0001049!4.90e-17!52;UBERON:0005068!4.90e-17!52;UBERON:0006241!4.90e-17!52;UBERON:0007135!4.90e-17!52;UBERON:0002791!1.08e-15!29;UBERON:0003528!1.08e-15!29;UBERON:0001893!1.08e-15!29;UBERON:0000955!1.79e-15!50;UBERON:0006238!1.79e-15!50;UBERON:0003080!2.81e-15!40;UBERON:0002616!6.01e-15!49;UBERON:0002780!1.17e-14!39;UBERON:0001890!1.17e-14!39;UBERON:0006240!1.17e-14!39;UBERON:0003056!4.28e-13!49;UBERON:0000033!9.95e-13!63;UBERON:0001017!1.37e-12!73;UBERON:0005743!1.37e-12!73;UBERON:0000073!4.34e-12!75;UBERON:0001016!4.34e-12!75;UBERON:0002346!3.57e-11!71;UBERON:0003075!3.57e-11!71;UBERON:0007284!3.57e-11!71;UBERON:0000956!5.69e-11!21;UBERON:0001869!5.69e-11!21;UBERON:0000203!5.69e-11!21;UBERON:0002619!8.31e-09!17;UBERON:0004121!1.12e-08!102;UBERON:0000924!1.12e-08!102;UBERON:0006601!1.12e-08!102;UBERON:0002021!2.46e-08!10;UBERON:0000411!2.46e-08!10;UBERON:0001950!2.46e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,1.03e-31,29;UBERON:0002791,1.03e-31,29;UBERON:0001893,1.03e-31,29;UBERON:0002020,1.05e-28,34;UBERON:0003080,1.17e-28,40;UBERON:0000073,2.33e-27,54;UBERON:0002780,5.04e-27,39;UBERON:0001890,5.04e-27,39;UBERON:0006240,5.04e-27,39;UBERON:0002616,3.37e-26,46;UBERON:0000955,1.66e-25,47;UBERON:0006238,1.66e-25,47;UBERON:0001049,2.53e-24,52;UBERON:0005068,2.53e-24,52;UBERON:0006241,2.53e-24,52;UBERON:0007135,2.53e-24,52;UBERON:0003056,2.90e-22,49;UBERON:0001017,1.28e-21,73;UBERON:0002021,1.62e-21,10;UBERON:0000411,1.62e-21,10;UBERON:0001950,1.62e-21,10;UBERON:0000956,4.34e-21,21;UBERON:0001869,4.34e-21,21;UBERON:0000203,4.34e-21,21;UBERON:0001016,7.52e-21,75;UBERON:0002346,1.53e-18,64;UBERON:0003075,1.53e-18,64;UBERON:0007284,1.53e-18,64;UBERON:0002619,2.94e-17,17;UBERON:0010371,1.85e-15,73;UBERON:0004121,6.06e-15,95;UBERON:0000924,6.06e-15,95;UBERON:0006601,6.06e-15,95;UBERON:0002420,1.15e-11,8;UBERON:0007245,1.15e-11,8;UBERON:0010009,1.15e-11,8;UBERON:0010011,1.15e-11,8;UBERON:0000454,1.15e-11,8;UBERON:0010314,5.95e-11,92;UBERON:0000369,4.48e-10,5;UBERON:0002435,4.48e-10,5;UBERON:0000204,4.48e-10,5;UBERON:0010082,4.48e-10,5;UBERON:0000025,1.40e-08,114;UBERON:0004111,1.34e-07,122 | |||
|phase1_expression=0.160148847104794,0,0,0.30246421130683,0,0,0,0,0,0,0,0.239316476986009,0,0,0,0.404950534779652,0.699561878128147,0,0,0,57.9995238830296,0,0.261199789138935,0,0,0,0,0,0.190023419456374,0,0,0.635030673459631,0.61506478758457,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,1.5869729378161,1.26766280701236,0,0,0.449949858640699,0,0,0,0,1.34796496001021,1.08004750665353,0.630974884054146,0.856952953211411,0.441737081903227,0.857435594504678,0.766763768145891,0.919218786610021,0,1.40456071893706,2.30409799884365,1.18697658957174,1.46380229763855,1.04182674111352,0.837548997004143,1.12552522006336,1.98637722109853,0.589257170947335,0.711858403995515,1.1183966749518,0.151452386666368,0,0,0,0,0,0,0,8.28622078777336,0,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0,6.73684890342454,0,0,0,0,0.230615497256059,0,0,0.251333182659351,0,0,0,0.161766849947409,0,0,0,0.878342391034642,0,0,0,0,0,1.64769703345305,2.74500361691176,1.88481528169297,4.34560800480691,4.60287823194595,2.28566849015516,2.27137768294861,0.101839363850316,0.248813941220186,9.60346482047964,0,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0.2562274405697,0.281105173679186,0.258703370739016,0.215567992932842,0.189106080167819,0.527853372491847,0,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0.492502392237286,0.243206428637567,0.292399974850665,0,0.402619256281115,2.94405927989778,2.88132914661996,0,0,0.213288250535234,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0.898819408654221,0.648414149624083,0.199141273254367,0,0.456994050438915,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,0.296452627087149,0.333690211432188,0.393117990226406,0.449724224769707,0.608580364165509,0.241177159752417,0,0,0,0.549122826376163,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,1.12385412991454,0.703270119553219,0.163934945376675,0.252470927204373,0,0,0,0.238968797952552,0,0,0,0,0,0.963963949265421,0,0.178065603667255,0,0.164970122972535,0,0,0.604647113929502,0.188605079755898,0,0.614870295887855,0,0.363533729477506,0.356497378384721,0,0,0,0.680879211507576,0,0.129358683782755,0.428674070063185,0,0.178368817602071,0,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0.482503399425247,0.119372344003136,0.328281799490123,0,0.741701208042039,0.170870880797853,0.412773735926445,0.185194527369712,0,0.27338845544205,0.228778173206523,0.169978429993855,0.139951452323658,0.138199973804424,0.954670618015114,0,0.609958401380546,0.108005340821801,0.209088296014469,0.436725127492355,0,0.0826534557253359,0,0.129614973291793,0,535.508291749981,0,0,0,0.258319646955462,0,0.117357238645754,0.5208175393758,0.419437377702843,1.93267296660805,82.9526418022653,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0.19318959403219,0,0.36630324853453,0.214368379079066,0,2.82375921308533,1.84130094602871,5.15605962095457,2.40594455281163,2.05524755931193,1.5107877947794,3.37511250115903,5.40385443869065,3.17199686288943,4.14208249401456,0.103787347584177,0,0.853668028770671,0.729320151204882,0.419226325255965,0.735374033800057,0.888986911206461,0.412070114477788,0.962757628775446,0,0.760437899670719,0.754505365544305,0.280924522409647,0.384150914429216,0.17230640686684,0,0.231768651889711,0,0.412085900803307,0.147198920134397,0.342869252385415,0.532427418478012,0.715308569841963,0.145346416632329,0.470546902076653,0.169229215783353,0.365855945745545,0,0.135804113845862,1.12228454331548,0.711810108745045,0.29551344712669,1.22769312950907,0.464810523557898,0.192906610981141,1.24905288968973,0.467863216890817,0,0.191288332068843,0,0.231867835620421 | |||
|short_description=p2@Reep6 | |||
}} |
Revision as of 19:46, 4 August 2015
Short description: | p2@Reep6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Reep6_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 8bp_to_ENSMUST00000105354, ENSMUST00000105355, ENSMUST00000105357, ENSMUST00000105358_5end |
EntrezGene: | 70335 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.58e-10 | 23 |
neuroblast (sensu Vertebrata) | 5.58e-10 | 23 |