FFCP PHASE1:Mm9::chr12:114659633..114659652,-: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=18|UniProt=|association_with_transcript=-413bp_to_uc007pgs.1_5end|description=CAGE_peak_4_at_uc007pgs.1_5end|id=chr12:114659633..114659652,-|ontology_enrichment_celltype=CL:0000553!9.31e-15!6;CL:0000556!9.31e-15!6;CL:0002031!1.68e-14!25;CL:0000988!3.28e-14!32;CL:0002032!3.28e-14!32;CL:0000037!3.28e-14!32;CL:0000566!3.28e-14!32;CL:0000837!3.28e-14!32;CL:0000838!8.99e-10!12;CL:0000050!1.58e-09!9;CL:0000542!6.44e-09!13;CL:0000051!6.44e-09!13;CL:0002320!1.03e-08!46;CL:0000134!1.03e-08!46;CL:0000084!5.20e-08!11;CL:0000827!5.20e-08!11;CL:0002027!5.55e-08!3;CL:0002006!5.55e-08!3;CL:0002024!5.55e-08!3;CL:0000414!1.25e-07!11;CL:0000791!2.66e-07!9;CL:0000789!2.66e-07!9;CL:0002420!2.66e-07!9;CL:0002419!2.66e-07!9;CL:0000790!2.66e-07!9;CL:0000219!7.03e-07!54;CL:0000049!7.48e-07!19|ontology_enrichment_celltype_v019_2=CL:0000553,2.38e-44,6;CL:0000556,2.38e-44,6;CL:0000050,1.44e-29,9;CL:0002027,2.56e-22,3;CL:0002006,2.56e-22,3;CL:0002024,2.56e-22,3;CL:0000839,1.91e-20,13;CL:0002031,2.26e-18,25;CL:0000763,1.38e-16,16;CL:0000988,3.11e-14,32;CL:0002032,3.11e-14,32;CL:0000037,3.11e-14,32;CL:0000837,3.11e-14,32;CL:0000049,6.12e-14,19;CL:0002320,1.03e-09,46;CL:0000134,1.03e-09,46;CL:0000945,7.41e-09,1;CL:0000236,7.41e-09,1;CL:0000826,7.41e-09,1;CL:0000625,2.89e-08,1;CL:0000219,3.56e-08,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!9.45e-23!48;UBERON:0002390!4.41e-18!45;UBERON:0003061!4.41e-18!45;UBERON:0002405!5.21e-15!70;UBERON:0004177!2.24e-12!29;UBERON:0002106!1.87e-09!6;UBERON:0004457!1.87e-09!6;UBERON:0000042!1.87e-09!6;UBERON:0004854!1.87e-09!6;UBERON:0009034!1.87e-09!6;UBERON:0002095!1.87e-09!6;UBERON:0004782!1.87e-09!6;UBERON:0003281!1.87e-09!6;UBERON:0009664!1.87e-09!6;UBERON:0002296!1.87e-09!6;UBERON:0005602!1.87e-09!6;UBERON:0001179!1.87e-09!6;UBERON:0006293!1.87e-09!6;UBERON:0002384!1.03e-08!46;UBERON:0003081!1.59e-08!88;UBERON:0002465!7.97e-08!3;UBERON:0001474!4.01e-07!22;UBERON:0004765!4.01e-07!22;UBERON:0001434!4.01e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.38e-16,16;UBERON:0001962,1.89e-15,2;UBERON:0001961,1.89e-15,2;UBERON:0001744,1.89e-15,2;UBERON:0001474,5.20e-12,22;UBERON:0004765,5.20e-12,22;UBERON:0001434,5.20e-12,22;UBERON:0002193,8.69e-12,48;UBERON:0002405,8.69e-12,48;UBERON:0002465,1.27e-10,3;UBERON:0002384,1.03e-09,46;UBERON:0003199,1.74e-08,1;UBERON:0002204,3.55e-08,32;UBERON:0002390,1.08e-07,45;UBERON:0003061,1.08e-07,45|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0,0.0797721589953364,0.171200729931206,0.0874204024189974,1.33243904726265,1.82227740650843,1.39912375625629,6.30924330716475,6.17014951225825,3.39511721438424,0,0.297872853602656,0,1.43993180514066,1.37645568640302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35565212115473,0,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0.254140454146129,0,0,0,0.173824320192276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.18542530201051,3.2465467351592,0.206386867963223,0,0.376736914009382,0.410082683163076,0.686334519619568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0.201932899896295,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p4@uc007pgs.1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-413bp_to_uc007pgs.1_5end | |||
|cluster_id=chr12:114659633..114659652,- | |||
|description=CAGE_peak_4_at_uc007pgs.1_5end | |||
|id=chr12:114659633..114659652,- | |||
|ontology_enrichment_celltype=CL:0000553!9.31e-15!6;CL:0000556!9.31e-15!6;CL:0002031!1.68e-14!25;CL:0000988!3.28e-14!32;CL:0002032!3.28e-14!32;CL:0000037!3.28e-14!32;CL:0000566!3.28e-14!32;CL:0000837!3.28e-14!32;CL:0000838!8.99e-10!12;CL:0000050!1.58e-09!9;CL:0000542!6.44e-09!13;CL:0000051!6.44e-09!13;CL:0002320!1.03e-08!46;CL:0000134!1.03e-08!46;CL:0000084!5.20e-08!11;CL:0000827!5.20e-08!11;CL:0002027!5.55e-08!3;CL:0002006!5.55e-08!3;CL:0002024!5.55e-08!3;CL:0000414!1.25e-07!11;CL:0000791!2.66e-07!9;CL:0000789!2.66e-07!9;CL:0002420!2.66e-07!9;CL:0002419!2.66e-07!9;CL:0000790!2.66e-07!9;CL:0000219!7.03e-07!54;CL:0000049!7.48e-07!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,2.38e-44,6;CL:0000556,2.38e-44,6;CL:0000050,1.44e-29,9;CL:0002027,2.56e-22,3;CL:0002006,2.56e-22,3;CL:0002024,2.56e-22,3;CL:0000839,1.91e-20,13;CL:0002031,2.26e-18,25;CL:0000763,1.38e-16,16;CL:0000988,3.11e-14,32;CL:0002032,3.11e-14,32;CL:0000037,3.11e-14,32;CL:0000837,3.11e-14,32;CL:0000049,6.12e-14,19;CL:0002320,1.03e-09,46;CL:0000134,1.03e-09,46;CL:0000945,7.41e-09,1;CL:0000236,7.41e-09,1;CL:0000826,7.41e-09,1;CL:0000625,2.89e-08,1;CL:0000219,3.56e-08,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.45e-23!48;UBERON:0002390!4.41e-18!45;UBERON:0003061!4.41e-18!45;UBERON:0002405!5.21e-15!70;UBERON:0004177!2.24e-12!29;UBERON:0002106!1.87e-09!6;UBERON:0004457!1.87e-09!6;UBERON:0000042!1.87e-09!6;UBERON:0004854!1.87e-09!6;UBERON:0009034!1.87e-09!6;UBERON:0002095!1.87e-09!6;UBERON:0004782!1.87e-09!6;UBERON:0003281!1.87e-09!6;UBERON:0009664!1.87e-09!6;UBERON:0002296!1.87e-09!6;UBERON:0005602!1.87e-09!6;UBERON:0001179!1.87e-09!6;UBERON:0006293!1.87e-09!6;UBERON:0002384!1.03e-08!46;UBERON:0003081!1.59e-08!88;UBERON:0002465!7.97e-08!3;UBERON:0001474!4.01e-07!22;UBERON:0004765!4.01e-07!22;UBERON:0001434!4.01e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.38e-16,16;UBERON:0001962,1.89e-15,2;UBERON:0001961,1.89e-15,2;UBERON:0001744,1.89e-15,2;UBERON:0001474,5.20e-12,22;UBERON:0004765,5.20e-12,22;UBERON:0001434,5.20e-12,22;UBERON:0002193,8.69e-12,48;UBERON:0002405,8.69e-12,48;UBERON:0002465,1.27e-10,3;UBERON:0002384,1.03e-09,46;UBERON:0003199,1.74e-08,1;UBERON:0002204,3.55e-08,32;UBERON:0002390,1.08e-07,45;UBERON:0003061,1.08e-07,45 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0,0.0797721589953364,0.171200729931206,0.0874204024189974,1.33243904726265,1.82227740650843,1.39912375625629,6.30924330716475,6.17014951225825,3.39511721438424,0,0.297872853602656,0,1.43993180514066,1.37645568640302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35565212115473,0,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0.254140454146129,0,0,0,0.173824320192276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.18542530201051,3.2465467351592,0.206386867963223,0,0.376736914009382,0.410082683163076,0.686334519619568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0.201932899896295,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@uc007pgs.1 | |||
}} |
Latest revision as of 19:46, 4 August 2015
Short description: | p4@uc007pgs.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_uc007pgs.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | -413bp_to_uc007pgs.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 2.38e-44 | 6 |
megakaryocyte | 2.38e-44 | 6 |
megakaryocyte-erythroid progenitor cell | 1.44e-29 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 2.56e-22 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 2.56e-22 | 3 |
Kit-positive megakaryocyte progenitor cell | 2.56e-22 | 3 |
myeloid lineage restricted progenitor cell | 1.91e-20 | 13 |
hematopoietic lineage restricted progenitor cell | 2.26e-18 | 25 |
myeloid cell | 1.38e-16 | 16 |
hematopoietic cell | 3.11e-14 | 32 |
hematopoietic oligopotent progenitor cell | 3.11e-14 | 32 |
hematopoietic stem cell | 3.11e-14 | 32 |
hematopoietic multipotent progenitor cell | 3.11e-14 | 32 |
common myeloid progenitor | 6.12e-14 | 19 |
connective tissue cell | 1.03e-09 | 46 |
mesenchymal cell | 1.03e-09 | 46 |
lymphocyte of B lineage | 7.41e-09 | 1 |
B cell | 7.41e-09 | 1 |
pro-B cell | 7.41e-09 | 1 |
CD8-positive, alpha-beta T cell | 2.89e-08 | 1 |
motile cell | 3.56e-08 | 54 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.38e-16 | 16 |
gut-associated lymphoid tissue | 1.89e-15 | 2 |
mucosa-associated lymphoid tissue | 1.89e-15 | 2 |
lymphoid tissue | 1.89e-15 | 2 |
bone element | 5.20e-12 | 22 |
skeletal element | 5.20e-12 | 22 |
skeletal system | 5.20e-12 | 22 |
hemolymphoid system | 8.69e-12 | 48 |
immune system | 8.69e-12 | 48 |
lymphoid system | 1.27e-10 | 3 |
connective tissue | 1.03e-09 | 46 |
egg chamber | 1.74e-08 | 1 |
musculoskeletal system | 3.55e-08 | 32 |
hematopoietic system | 1.08e-07 | 45 |
blood island | 1.08e-07 | 45 |