FFCP PHASE1:Mm9::chr12:114659326..114659343,-: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=372|UniProt=|association_with_transcript=-106bp_to_uc007pgs.1_5end|description=CAGE_peak_5_at_uc007pgs.1_5end|id=chr12:114659326..114659343,-|ontology_enrichment_celltype=CL:0000553!2.72e-16!6;CL:0000556!2.72e-16!6;CL:0002031!1.30e-12!25;CL:0000050!1.41e-10!9;CL:0000988!2.90e-09!32;CL:0002032!2.90e-09!32;CL:0000037!2.90e-09!32;CL:0000566!2.90e-09!32;CL:0000837!2.90e-09!32;CL:0002027!7.63e-09!3;CL:0002006!7.63e-09!3;CL:0002024!7.63e-09!3;CL:0000414!1.69e-08!11;CL:0000839!4.62e-07!13;CL:0000838!7.10e-07!12|ontology_enrichment_celltype_v019_2=CL:0000553,9.65e-46,6;CL:0000556,9.65e-46,6;CL:0000050,1.17e-30,9;CL:0000839,2.37e-21,13;CL:0000763,2.06e-17,16;CL:0002031,7.05e-16,25;CL:0002027,1.73e-15,3;CL:0002006,1.73e-15,3;CL:0002024,1.73e-15,3;CL:0000049,1.03e-14,19;CL:0000988,1.97e-12,32;CL:0002032,1.97e-12,32;CL:0000037,1.97e-12,32;CL:0000837,1.97e-12,32;CL:0000945,4.30e-12,1;CL:0000236,4.30e-12,1;CL:0000826,4.30e-12,1;CL:0002320,1.16e-08,46;CL:0000134,1.16e-08,46;CL:0000219,2.24e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!4.05e-18!48;UBERON:0002390!6.72e-14!45;UBERON:0003061!6.72e-14!45;UBERON:0002405!7.33e-11!70;UBERON:0003081!9.99e-11!88;UBERON:0002106!1.99e-10!6;UBERON:0004457!1.99e-10!6;UBERON:0000042!1.99e-10!6;UBERON:0004854!1.99e-10!6;UBERON:0009034!1.99e-10!6;UBERON:0002095!1.99e-10!6;UBERON:0004782!1.99e-10!6;UBERON:0003281!1.99e-10!6;UBERON:0009664!1.99e-10!6;UBERON:0002296!1.99e-10!6;UBERON:0005602!1.99e-10!6;UBERON:0001179!1.99e-10!6;UBERON:0006293!1.99e-10!6;UBERON:0001474!5.08e-10!22;UBERON:0004765!5.08e-10!22;UBERON:0001434!5.08e-10!22;UBERON:0004177!2.55e-09!29;UBERON:0003887!2.75e-08!10;UBERON:0007823!3.86e-08!5;UBERON:0002465!7.26e-08!3;UBERON:0002529!8.90e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.06e-17,16;UBERON:0001474,9.65e-13,22;UBERON:0004765,9.65e-13,22;UBERON:0001434,9.65e-13,22;UBERON:0002390,5.95e-12,45;UBERON:0003061,5.95e-12,45;UBERON:0002193,3.33e-11,48;UBERON:0002405,3.33e-11,48;UBERON:0002204,7.98e-09,32;UBERON:0002384,1.16e-08,46;UBERON:0002106,3.14e-08,6;UBERON:0004457,3.14e-08,6;UBERON:0000042,3.14e-08,6;UBERON:0004854,3.14e-08,6;UBERON:0009034,3.14e-08,6;UBERON:0002095,3.14e-08,6;UBERON:0004782,3.14e-08,6;UBERON:0003281,3.14e-08,6;UBERON:0009664,3.14e-08,6;UBERON:0002296,3.14e-08,6;UBERON:0005602,3.14e-08,6;UBERON:0001179,3.14e-08,6;UBERON:0006293,3.14e-08,6|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.258246646883153,0,0,0,0,0.342401459862411,0,0.999329285446988,3.44207954562704,1.39912375625629,3.15462165358238,5.48457734422955,2.54633791078818,0,0.198581902401771,0.522399578277871,0.47997726838022,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67782606057736,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.75915937755276,0,0.185194527369712,0.376736914009382,0.27338845544205,1.37266903923914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0.179026695667481,0,0,0,0,0.15241361331,0.100826185136841,0,0.288635524920988,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p5@uc007pgs.1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=372 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-106bp_to_uc007pgs.1_5end | |||
|cluster_id=chr12:114659326..114659343,- | |||
|description=CAGE_peak_5_at_uc007pgs.1_5end | |||
|id=chr12:114659326..114659343,- | |||
|ontology_enrichment_celltype=CL:0000553!2.72e-16!6;CL:0000556!2.72e-16!6;CL:0002031!1.30e-12!25;CL:0000050!1.41e-10!9;CL:0000988!2.90e-09!32;CL:0002032!2.90e-09!32;CL:0000037!2.90e-09!32;CL:0000566!2.90e-09!32;CL:0000837!2.90e-09!32;CL:0002027!7.63e-09!3;CL:0002006!7.63e-09!3;CL:0002024!7.63e-09!3;CL:0000414!1.69e-08!11;CL:0000839!4.62e-07!13;CL:0000838!7.10e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,9.65e-46,6;CL:0000556,9.65e-46,6;CL:0000050,1.17e-30,9;CL:0000839,2.37e-21,13;CL:0000763,2.06e-17,16;CL:0002031,7.05e-16,25;CL:0002027,1.73e-15,3;CL:0002006,1.73e-15,3;CL:0002024,1.73e-15,3;CL:0000049,1.03e-14,19;CL:0000988,1.97e-12,32;CL:0002032,1.97e-12,32;CL:0000037,1.97e-12,32;CL:0000837,1.97e-12,32;CL:0000945,4.30e-12,1;CL:0000236,4.30e-12,1;CL:0000826,4.30e-12,1;CL:0002320,1.16e-08,46;CL:0000134,1.16e-08,46;CL:0000219,2.24e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.05e-18!48;UBERON:0002390!6.72e-14!45;UBERON:0003061!6.72e-14!45;UBERON:0002405!7.33e-11!70;UBERON:0003081!9.99e-11!88;UBERON:0002106!1.99e-10!6;UBERON:0004457!1.99e-10!6;UBERON:0000042!1.99e-10!6;UBERON:0004854!1.99e-10!6;UBERON:0009034!1.99e-10!6;UBERON:0002095!1.99e-10!6;UBERON:0004782!1.99e-10!6;UBERON:0003281!1.99e-10!6;UBERON:0009664!1.99e-10!6;UBERON:0002296!1.99e-10!6;UBERON:0005602!1.99e-10!6;UBERON:0001179!1.99e-10!6;UBERON:0006293!1.99e-10!6;UBERON:0001474!5.08e-10!22;UBERON:0004765!5.08e-10!22;UBERON:0001434!5.08e-10!22;UBERON:0004177!2.55e-09!29;UBERON:0003887!2.75e-08!10;UBERON:0007823!3.86e-08!5;UBERON:0002465!7.26e-08!3;UBERON:0002529!8.90e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.06e-17,16;UBERON:0001474,9.65e-13,22;UBERON:0004765,9.65e-13,22;UBERON:0001434,9.65e-13,22;UBERON:0002390,5.95e-12,45;UBERON:0003061,5.95e-12,45;UBERON:0002193,3.33e-11,48;UBERON:0002405,3.33e-11,48;UBERON:0002204,7.98e-09,32;UBERON:0002384,1.16e-08,46;UBERON:0002106,3.14e-08,6;UBERON:0004457,3.14e-08,6;UBERON:0000042,3.14e-08,6;UBERON:0004854,3.14e-08,6;UBERON:0009034,3.14e-08,6;UBERON:0002095,3.14e-08,6;UBERON:0004782,3.14e-08,6;UBERON:0003281,3.14e-08,6;UBERON:0009664,3.14e-08,6;UBERON:0002296,3.14e-08,6;UBERON:0005602,3.14e-08,6;UBERON:0001179,3.14e-08,6;UBERON:0006293,3.14e-08,6 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.258246646883153,0,0,0,0,0.342401459862411,0,0.999329285446988,3.44207954562704,1.39912375625629,3.15462165358238,5.48457734422955,2.54633791078818,0,0.198581902401771,0.522399578277871,0.47997726838022,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67782606057736,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.75915937755276,0,0.185194527369712,0.376736914009382,0.27338845544205,1.37266903923914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0.179026695667481,0,0,0,0,0.15241361331,0.100826185136841,0,0.288635524920988,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@uc007pgs.1 | |||
}} |
Latest revision as of 19:45, 4 August 2015
Short description: | p5@uc007pgs.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_uc007pgs.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:372 |
Association with transcript: | -106bp_to_uc007pgs.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 9.65e-46 | 6 |
megakaryocyte | 9.65e-46 | 6 |
megakaryocyte-erythroid progenitor cell | 1.17e-30 | 9 |
myeloid lineage restricted progenitor cell | 2.37e-21 | 13 |
myeloid cell | 2.06e-17 | 16 |
hematopoietic lineage restricted progenitor cell | 7.05e-16 | 25 |
CD9-positive, CD41-positive megakaryocyte cell | 1.73e-15 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.73e-15 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.73e-15 | 3 |
common myeloid progenitor | 1.03e-14 | 19 |
hematopoietic cell | 1.97e-12 | 32 |
hematopoietic oligopotent progenitor cell | 1.97e-12 | 32 |
hematopoietic stem cell | 1.97e-12 | 32 |
hematopoietic multipotent progenitor cell | 1.97e-12 | 32 |
lymphocyte of B lineage | 4.30e-12 | 1 |
B cell | 4.30e-12 | 1 |
pro-B cell | 4.30e-12 | 1 |
connective tissue cell | 1.16e-08 | 46 |
mesenchymal cell | 1.16e-08 | 46 |
motile cell | 2.24e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.06e-17 | 16 |
bone element | 9.65e-13 | 22 |
skeletal element | 9.65e-13 | 22 |
skeletal system | 9.65e-13 | 22 |
hematopoietic system | 5.95e-12 | 45 |
blood island | 5.95e-12 | 45 |
hemolymphoid system | 3.33e-11 | 48 |
immune system | 3.33e-11 | 48 |
musculoskeletal system | 7.98e-09 | 32 |
connective tissue | 1.16e-08 | 46 |
spleen | 3.14e-08 | 6 |
cavity lining | 3.14e-08 | 6 |
serous membrane | 3.14e-08 | 6 |
gastrointestinal system mesentery | 3.14e-08 | 6 |
stomach region | 3.14e-08 | 6 |
mesentery | 3.14e-08 | 6 |
gastrointestinal system serosa | 3.14e-08 | 6 |
mesentery of stomach | 3.14e-08 | 6 |
gut mesentery | 3.14e-08 | 6 |
dorsal mesentery | 3.14e-08 | 6 |
dorsal mesogastrium | 3.14e-08 | 6 |
peritoneal cavity | 3.14e-08 | 6 |
spleen primordium | 3.14e-08 | 6 |