FFCP PHASE1:Mm9::chr12:114645518..114645529,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=18|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:114645518..114645529,-|id=chr12:114645518..114645529,-|ontology_enrichment_celltype=CL:0000553!4.44e-14!6;CL:0000556!4.44e-14!6;CL:0000050!2.84e-09!9;CL:0000414!1.61e-07!11|ontology_enrichment_celltype_v019_2=CL:0000553,1.45e-29,6;CL:0000556,1.45e-29,6;CL:0000050,6.57e-20,9;CL:0000839,6.11e-14,13;CL:0000763,2.07e-11,16;CL:0000049,1.13e-09,19;CL:0002031,1.94e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!7.57e-09!48;UBERON:0002106!9.52e-09!6;UBERON:0004457!9.52e-09!6;UBERON:0000042!9.52e-09!6;UBERON:0004854!9.52e-09!6;UBERON:0009034!9.52e-09!6;UBERON:0002095!9.52e-09!6;UBERON:0004782!9.52e-09!6;UBERON:0003281!9.52e-09!6;UBERON:0009664!9.52e-09!6;UBERON:0002296!9.52e-09!6;UBERON:0005602!9.52e-09!6;UBERON:0001179!9.52e-09!6;UBERON:0006293!9.52e-09!6|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.20e-12,1;UBERON:0001097,1.20e-12,1;UBERON:0003968,1.20e-12,1;UBERON:0001467,1.20e-12,1;UBERON:0002371,2.07e-11,16;UBERON:0002193,3.21e-11,48;UBERON:0002405,3.21e-11,48;UBERON:0002390,7.94e-09,45;UBERON:0003061,7.94e-09,45;UBERON:0001474,2.09e-08,22;UBERON:0004765,2.09e-08,22;UBERON:0001434,2.09e-08,22;UBERON:0002106,3.41e-08,6;UBERON:0004457,3.41e-08,6;UBERON:0000042,3.41e-08,6;UBERON:0004854,3.41e-08,6;UBERON:0009034,3.41e-08,6;UBERON:0002095,3.41e-08,6;UBERON:0004782,3.41e-08,6;UBERON:0003281,3.41e-08,6;UBERON:0009664,3.41e-08,6;UBERON:0002296,3.41e-08,6;UBERON:0005602,3.41e-08,6;UBERON:0001179,3.41e-08,6;UBERON:0006293,3.41e-08,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,1.21485160433896,0,5.0473946457318,6.7186072466812,2.12194825899015,0,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0.503347818173209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.54495016035667,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0.220841518460394,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,2.05045056957423,0,0,0.188368457004691,1.77702496037333,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p@chr12:114645518..114645529,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:114645518..114645529,- | |||
|description=CAGE_peak_at_chr12:114645518..114645529,- | |||
|id=chr12:114645518..114645529,- | |||
|ontology_enrichment_celltype=CL:0000553!4.44e-14!6;CL:0000556!4.44e-14!6;CL:0000050!2.84e-09!9;CL:0000414!1.61e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.45e-29,6;CL:0000556,1.45e-29,6;CL:0000050,6.57e-20,9;CL:0000839,6.11e-14,13;CL:0000763,2.07e-11,16;CL:0000049,1.13e-09,19;CL:0002031,1.94e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.57e-09!48;UBERON:0002106!9.52e-09!6;UBERON:0004457!9.52e-09!6;UBERON:0000042!9.52e-09!6;UBERON:0004854!9.52e-09!6;UBERON:0009034!9.52e-09!6;UBERON:0002095!9.52e-09!6;UBERON:0004782!9.52e-09!6;UBERON:0003281!9.52e-09!6;UBERON:0009664!9.52e-09!6;UBERON:0002296!9.52e-09!6;UBERON:0005602!9.52e-09!6;UBERON:0001179!9.52e-09!6;UBERON:0006293!9.52e-09!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.20e-12,1;UBERON:0001097,1.20e-12,1;UBERON:0003968,1.20e-12,1;UBERON:0001467,1.20e-12,1;UBERON:0002371,2.07e-11,16;UBERON:0002193,3.21e-11,48;UBERON:0002405,3.21e-11,48;UBERON:0002390,7.94e-09,45;UBERON:0003061,7.94e-09,45;UBERON:0001474,2.09e-08,22;UBERON:0004765,2.09e-08,22;UBERON:0001434,2.09e-08,22;UBERON:0002106,3.41e-08,6;UBERON:0004457,3.41e-08,6;UBERON:0000042,3.41e-08,6;UBERON:0004854,3.41e-08,6;UBERON:0009034,3.41e-08,6;UBERON:0002095,3.41e-08,6;UBERON:0004782,3.41e-08,6;UBERON:0003281,3.41e-08,6;UBERON:0009664,3.41e-08,6;UBERON:0002296,3.41e-08,6;UBERON:0005602,3.41e-08,6;UBERON:0001179,3.41e-08,6;UBERON:0006293,3.41e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,1.21485160433896,0,5.0473946457318,6.7186072466812,2.12194825899015,0,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0.503347818173209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.54495016035667,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0.220841518460394,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,2.05045056957423,0,0,0.188368457004691,1.77702496037333,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr12:114645518..114645529,- | |||
}} |
Latest revision as of 19:43, 4 August 2015
Short description: | p@chr12:114645518..114645529, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:114645518..114645529, - |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.45e-29 | 6 |
megakaryocyte | 1.45e-29 | 6 |
megakaryocyte-erythroid progenitor cell | 6.57e-20 | 9 |
myeloid lineage restricted progenitor cell | 6.11e-14 | 13 |
myeloid cell | 2.07e-11 | 16 |
common myeloid progenitor | 1.13e-09 | 19 |
hematopoietic lineage restricted progenitor cell | 1.94e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
lymph node | 1.20e-12 | 1 |
axillary lymph node | 1.20e-12 | 1 |
peripheral lymph node | 1.20e-12 | 1 |
shoulder | 1.20e-12 | 1 |
bone marrow | 2.07e-11 | 16 |
hemolymphoid system | 3.21e-11 | 48 |
immune system | 3.21e-11 | 48 |
hematopoietic system | 7.94e-09 | 45 |
blood island | 7.94e-09 | 45 |
bone element | 2.09e-08 | 22 |
skeletal element | 2.09e-08 | 22 |
skeletal system | 2.09e-08 | 22 |
spleen | 3.41e-08 | 6 |
cavity lining | 3.41e-08 | 6 |
serous membrane | 3.41e-08 | 6 |
gastrointestinal system mesentery | 3.41e-08 | 6 |
stomach region | 3.41e-08 | 6 |
mesentery | 3.41e-08 | 6 |
gastrointestinal system serosa | 3.41e-08 | 6 |
mesentery of stomach | 3.41e-08 | 6 |
gut mesentery | 3.41e-08 | 6 |
dorsal mesentery | 3.41e-08 | 6 |
dorsal mesogastrium | 3.41e-08 | 6 |
peritoneal cavity | 3.41e-08 | 6 |
spleen primordium | 3.41e-08 | 6 |