FFCP PHASE1:Mm9::chr2:180773865..180773897,-: Difference between revisions
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{{FFCP|EntrezGene=11438|HGNC=|MCL_coexpression_id=189|UniProt=B7ZBU7,O70174,Q53YK0|association_with_transcript=0bp_to_ENSMUST00000108851,NM_015730,uc008okq.1_5end|description=CAGE_peak_4_at_Chrna4_5end|id=chr2:180773865..180773897,-|ontology_enrichment_celltype=CL:0000221!6.06e-09!44;CL:0000133!6.06e-09!44;CL:0000117!8.39e-09!23;CL:0000337!8.39e-09!23;CL:0002319!1.18e-08!43;CL:0000540!3.80e-08!33;CL:0000047!3.80e-08!33;CL:0000031!3.80e-08!33;CL:0000404!3.80e-08!33;CL:0000055!5.17e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.49e-23,23;CL:0000337,2.49e-23,23;CL:0000540,6.74e-15,33;CL:0000047,6.74e-15,33;CL:0000031,6.74e-15,33;CL:0000404,6.74e-15,33;CL:0000393,6.22e-12,39;CL:0000211,6.22e-12,39;CL:0002319,9.39e-12,43;CL:0000221,2.20e-11,44;CL:0000133,2.20e-11,44;CL:0002610,5.25e-08,3;CL:0002614,2.66e-07,3;CL:0000120,6.21e-07,3;CL:0002612,6.50e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.13e-27!102;UBERON:0000924!1.13e-27!102;UBERON:0006601!1.13e-27!102;UBERON:0002346!2.13e-23!71;UBERON:0003075!2.13e-23!71;UBERON:0007284!2.13e-23!71;UBERON:0001017!3.30e-23!73;UBERON:0005743!3.30e-23!73;UBERON:0000073!1.32e-22!75;UBERON:0001016!1.32e-22!75;UBERON:0000033!1.62e-19!63;UBERON:0001049!1.02e-16!52;UBERON:0005068!1.02e-16!52;UBERON:0006241!1.02e-16!52;UBERON:0007135!1.02e-16!52;UBERON:0003056!2.41e-15!49;UBERON:0000955!2.65e-15!50;UBERON:0006238!2.65e-15!50;UBERON:0002616!9.33e-15!49;UBERON:0002020!1.74e-12!34;UBERON:0003080!1.23e-10!40;UBERON:0007811!3.80e-10!86;UBERON:0002780!6.05e-10!39;UBERON:0001890!6.05e-10!39;UBERON:0006240!6.05e-10!39;UBERON:0002791!4.83e-09!29;UBERON:0003528!4.83e-09!29;UBERON:0001893!4.83e-09!29;UBERON:0002021!2.13e-08!10;UBERON:0000411!2.13e-08!10;UBERON:0001950!2.13e-08!10;UBERON:0000153!2.14e-08!94;UBERON:0003076!2.13e-07!12;UBERON:0003057!2.13e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.64e-27,64;UBERON:0003075,1.64e-27,64;UBERON:0007284,1.64e-27,64;UBERON:0004121,8.12e-27,95;UBERON:0000924,8.12e-27,95;UBERON:0006601,8.12e-27,95;UBERON:0000073,1.11e-26,54;UBERON:0001017,2.77e-26,73;UBERON:0001016,2.33e-25,75;UBERON:0001049,2.84e-23,52;UBERON:0005068,2.84e-23,52;UBERON:0006241,2.84e-23,52;UBERON:0007135,2.84e-23,52;UBERON:0010371,4.05e-23,73;UBERON:0002020,9.17e-22,34;UBERON:0003056,1.38e-19,49;UBERON:0010314,6.98e-18,92;UBERON:0002616,5.76e-15,46;UBERON:0002021,6.02e-15,10;UBERON:0000411,6.02e-15,10;UBERON:0001950,6.02e-15,10;UBERON:0000955,1.56e-14,47;UBERON:0006238,1.56e-14,47;UBERON:0003528,3.07e-14,29;UBERON:0002791,3.07e-14,29;UBERON:0001893,3.07e-14,29;UBERON:0003080,3.35e-14,40;UBERON:0002780,7.47e-13,39;UBERON:0001890,7.47e-13,39;UBERON:0006240,7.47e-13,39;UBERON:0002240,1.13e-12,6;UBERON:0005174,1.13e-12,6;UBERON:0001137,1.13e-12,6;UBERON:0001948,1.08e-10,5;UBERON:0002315,1.08e-10,5;UBERON:0003076,1.96e-10,12;UBERON:0003057,1.96e-10,12;UBERON:0002950,2.51e-09,4;UBERON:0001891,2.51e-09,4;UBERON:0009616,2.51e-09,4;UBERON:0010286,2.51e-09,4;UBERON:0002420,9.06e-09,8;UBERON:0007245,9.06e-09,8;UBERON:0010009,9.06e-09,8;UBERON:0010011,9.06e-09,8;UBERON:0000454,9.06e-09,8;UBERON:0002619,4.65e-08,17;UBERON:0004684,5.25e-08,3;UBERON:0002275,5.25e-08,3;UBERON:0000956,1.07e-07,21;UBERON:0001869,1.07e-07,21;UBERON:0000203,1.07e-07,21;UBERON:0002038,2.66e-07,3;UBERON:0009663,2.66e-07,3;UBERON:0009661,2.66e-07,3;UBERON:0000125,2.66e-07,3;UBERON:0002308,2.66e-07,3;UBERON:0000025,5.89e-07,114;UBERON:0002257,6.50e-07,3|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.436050312760893,0.219686182734472,0,0.139986421625363,1.43752564364972,0,0,0,0.257259436035947,0,0,3.03474691289397,3.1739458756322,3.1691570175309,0,0,0,0,0,0.299600110518405,0.768436610643109,0,0,0,5.42736870367227,3.3130281142742,0,0,0,14.3150645299205,17.8762273319263,18.279177457493,1.84640802822271,2.56165402086747,1.56274011167028,8.65467296904281,2.25105044012672,7.63991238884051,4.41942878210502,3.98640706237488,2.05039390407831,0,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,1.03909497345377,0.173485326766136,0,0.230615497256059,0.150722640552623,0.23517741427141,0.251333182659351,0,0,0,0.161766849947409,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,7.63932260964596,0.915001205637253,0.251308704225729,2.25971616249959,2.30143911597297,9.97382613885888,5.353961681236,0.305518091550949,0,0,1.47309299120532,0.260240885925407,0.689706313300419,1.44049703844279,1.20563854268572,2.10913147369116,1.2811372028485,1.40552586839593,0.517406741478031,0,0.378212160335639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0,0,0,0,0,0,0,0.420579897128254,0.308713837137853,0,0,0,0,0,0,0,0,0,0.329397909448022,0,0,0,0,0.216138049874694,0,0.189667900953082,0,0,0.407302655690628,0,0.140271639780637,0.948548056863859,1.03327103585722,0.627994911365499,1.233971639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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:11438 | |||
|HGNC= | |||
|MCL_coexpression_id=189 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:B7ZBU7,uniprot:O70174,uniprot:Q53YK0 | |||
|association_with_transcript=0bp_to_ENSMUST00000108851,NM_015730,uc008okq.1_5end | |||
|cluster_id=chr2:180773865..180773897,- | |||
|description=CAGE_peak_4_at_Chrna4_5end | |||
|id=chr2:180773865..180773897,- | |||
|ontology_enrichment_celltype=CL:0000221!6.06e-09!44;CL:0000133!6.06e-09!44;CL:0000117!8.39e-09!23;CL:0000337!8.39e-09!23;CL:0002319!1.18e-08!43;CL:0000540!3.80e-08!33;CL:0000047!3.80e-08!33;CL:0000031!3.80e-08!33;CL:0000404!3.80e-08!33;CL:0000055!5.17e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.49e-23,23;CL:0000337,2.49e-23,23;CL:0000540,6.74e-15,33;CL:0000047,6.74e-15,33;CL:0000031,6.74e-15,33;CL:0000404,6.74e-15,33;CL:0000393,6.22e-12,39;CL:0000211,6.22e-12,39;CL:0002319,9.39e-12,43;CL:0000221,2.20e-11,44;CL:0000133,2.20e-11,44;CL:0002610,5.25e-08,3;CL:0002614,2.66e-07,3;CL:0000120,6.21e-07,3;CL:0002612,6.50e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.13e-27!102;UBERON:0000924!1.13e-27!102;UBERON:0006601!1.13e-27!102;UBERON:0002346!2.13e-23!71;UBERON:0003075!2.13e-23!71;UBERON:0007284!2.13e-23!71;UBERON:0001017!3.30e-23!73;UBERON:0005743!3.30e-23!73;UBERON:0000073!1.32e-22!75;UBERON:0001016!1.32e-22!75;UBERON:0000033!1.62e-19!63;UBERON:0001049!1.02e-16!52;UBERON:0005068!1.02e-16!52;UBERON:0006241!1.02e-16!52;UBERON:0007135!1.02e-16!52;UBERON:0003056!2.41e-15!49;UBERON:0000955!2.65e-15!50;UBERON:0006238!2.65e-15!50;UBERON:0002616!9.33e-15!49;UBERON:0002020!1.74e-12!34;UBERON:0003080!1.23e-10!40;UBERON:0007811!3.80e-10!86;UBERON:0002780!6.05e-10!39;UBERON:0001890!6.05e-10!39;UBERON:0006240!6.05e-10!39;UBERON:0002791!4.83e-09!29;UBERON:0003528!4.83e-09!29;UBERON:0001893!4.83e-09!29;UBERON:0002021!2.13e-08!10;UBERON:0000411!2.13e-08!10;UBERON:0001950!2.13e-08!10;UBERON:0000153!2.14e-08!94;UBERON:0003076!2.13e-07!12;UBERON:0003057!2.13e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.64e-27,64;UBERON:0003075,1.64e-27,64;UBERON:0007284,1.64e-27,64;UBERON:0004121,8.12e-27,95;UBERON:0000924,8.12e-27,95;UBERON:0006601,8.12e-27,95;UBERON:0000073,1.11e-26,54;UBERON:0001017,2.77e-26,73;UBERON:0001016,2.33e-25,75;UBERON:0001049,2.84e-23,52;UBERON:0005068,2.84e-23,52;UBERON:0006241,2.84e-23,52;UBERON:0007135,2.84e-23,52;UBERON:0010371,4.05e-23,73;UBERON:0002020,9.17e-22,34;UBERON:0003056,1.38e-19,49;UBERON:0010314,6.98e-18,92;UBERON:0002616,5.76e-15,46;UBERON:0002021,6.02e-15,10;UBERON:0000411,6.02e-15,10;UBERON:0001950,6.02e-15,10;UBERON:0000955,1.56e-14,47;UBERON:0006238,1.56e-14,47;UBERON:0003528,3.07e-14,29;UBERON:0002791,3.07e-14,29;UBERON:0001893,3.07e-14,29;UBERON:0003080,3.35e-14,40;UBERON:0002780,7.47e-13,39;UBERON:0001890,7.47e-13,39;UBERON:0006240,7.47e-13,39;UBERON:0002240,1.13e-12,6;UBERON:0005174,1.13e-12,6;UBERON:0001137,1.13e-12,6;UBERON:0001948,1.08e-10,5;UBERON:0002315,1.08e-10,5;UBERON:0003076,1.96e-10,12;UBERON:0003057,1.96e-10,12;UBERON:0002950,2.51e-09,4;UBERON:0001891,2.51e-09,4;UBERON:0009616,2.51e-09,4;UBERON:0010286,2.51e-09,4;UBERON:0002420,9.06e-09,8;UBERON:0007245,9.06e-09,8;UBERON:0010009,9.06e-09,8;UBERON:0010011,9.06e-09,8;UBERON:0000454,9.06e-09,8;UBERON:0002619,4.65e-08,17;UBERON:0004684,5.25e-08,3;UBERON:0002275,5.25e-08,3;UBERON:0000956,1.07e-07,21;UBERON:0001869,1.07e-07,21;UBERON:0000203,1.07e-07,21;UBERON:0002038,2.66e-07,3;UBERON:0009663,2.66e-07,3;UBERON:0009661,2.66e-07,3;UBERON:0000125,2.66e-07,3;UBERON:0002308,2.66e-07,3;UBERON:0000025,5.89e-07,114;UBERON:0002257,6.50e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.436050312760893,0.219686182734472,0,0.139986421625363,1.43752564364972,0,0,0,0.257259436035947,0,0,3.03474691289397,3.1739458756322,3.1691570175309,0,0,0,0,0,0.299600110518405,0.768436610643109,0,0,0,5.42736870367227,3.3130281142742,0,0,0,14.3150645299205,17.8762273319263,18.279177457493,1.84640802822271,2.56165402086747,1.56274011167028,8.65467296904281,2.25105044012672,7.63991238884051,4.41942878210502,3.98640706237488,2.05039390407831,0,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,1.03909497345377,0.173485326766136,0,0.230615497256059,0.150722640552623,0.23517741427141,0.251333182659351,0,0,0,0.161766849947409,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,7.63932260964596,0.915001205637253,0.251308704225729,2.25971616249959,2.30143911597297,9.97382613885888,5.353961681236,0.305518091550949,0,0,1.47309299120532,0.260240885925407,0.689706313300419,1.44049703844279,1.20563854268572,2.10913147369116,1.2811372028485,1.40552586839593,0.517406741478031,0,0.378212160335639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0,0,0,0,0,0,0,0.420579897128254,0.308713837137853,0,0,0,0,0,0,0,0,0,0.329397909448022,0,0,0,0,0.216138049874694,0,0.189667900953082,0,0,0.407302655690628,0,0.140271639780637,0.948548056863859,1.03327103585722,0.627994911365499,1.23397163921801,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69266356971921,4.21962071731931,0,0,0,0.780877488593277,0.646270193198397,0.238968797952552,0.222798674082394,0.283076530788832,0,0,0,0.963963949265421,0.283880170416537,0.178065603667255,0.325773918707152,0.494910368917606,0,0.242780636154981,0.604647113929502,0.188605079755898,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0.214337035031592,0.177340233642274,0.535106452806212,0,0.608929898229199,0,0.21183207086382,0,0.16488625294148,0,0.120625849856312,0.596861720015682,0.492422699235184,0,5.93360966433631,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0.506868376472335,0,0.2604087696879,0.104859344425711,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.335769232728157,0,0,0,0,0,2.25900737046827,1.84130094602871,2.86447756719698,2.23409137046794,2.05524755931193,2.2661816921691,3.37511250115903,0.900642406448441,2.71885445390523,6.21312374102184,0.103787347584177,1.19707462020309,0.170733605754134,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0,0.252697211763798,0,0.188626341386076,0.280924522409647,0.256100609619477,0.17230640686684,1.42888107384922,0,0.192909220463705,0.412085900803307,0.441596760403192,0.342869252385415,0.354951612318675,0,0.145346416632329,0.376437521661322,0.169229215783353,0.548783918618318,0.263069711437843,0,0,0.237270036248348,0,0,0.309873682371932,0.192906610981141,0.999242311751784,0.233931608445408,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p4@Chrna4 | |||
}} |
Revision as of 17:52, 4 August 2015
Short description: | p4@Chrna4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Chrna4_5end |
Coexpression cluster: | MCL_coexpression_mm9:189 |
Association with transcript: | 0bp_to_ENSMUST00000108851, NM_015730, uc008okq.1_5end |
EntrezGene: | 11438 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.49e-23 | 23 |
neuroblast (sensu Vertebrata) | 2.49e-23 | 23 |
neuron | 6.74e-15 | 33 |
neuronal stem cell | 6.74e-15 | 33 |
neuroblast | 6.74e-15 | 33 |
electrically signaling cell | 6.74e-15 | 33 |
electrically responsive cell | 6.22e-12 | 39 |
electrically active cell | 6.22e-12 | 39 |
neural cell | 9.39e-12 | 43 |
ectodermal cell | 2.20e-11 | 44 |
neurectodermal cell | 2.20e-11 | 44 |
raphe nuclei neuron | 5.25e-08 | 3 |
neuron of the substantia nigra | 2.66e-07 | 3 |
granule cell | 6.21e-07 | 3 |
neuron of the ventral spinal cord | 6.50e-07 | 3 |