FFCP PHASE1:Mm9::chr14:65207173..65207198,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=392|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:65207173..65207198,+|id=chr14:65207173..65207198,+|ontology_enrichment_celltype=CL:0000117!3.27e-27!23;CL:0000337!3.27e-27!23;CL:0000540!2.54e-22!33;CL:0000047!2.54e-22!33;CL:0000031!2.54e-22!33;CL:0000404!2.54e-22!33;CL:0002319!2.04e-18!43;CL:0000221!9.18e-18!44;CL:0000133!9.18e-18!44;CL:0000393!2.15e-17!39;CL:0000211!2.15e-17!39;CL:0000055!2.04e-14!50;CL:0002609!6.65e-09!6;CL:0002321!1.20e-07!70;CL:0000220!1.20e-07!70|ontology_enrichment_celltype_v019_2=CL:0000117,4.47e-43,23;CL:0000337,4.47e-43,23;CL:0000540,4.79e-28,33;CL:0000047,4.79e-28,33;CL:0000031,4.79e-28,33;CL:0000404,4.79e-28,33;CL:0000393,9.70e-23,39;CL:0000211,9.70e-23,39;CL:0002319,4.97e-20,43;CL:0000221,1.98e-19,44;CL:0000133,1.98e-19,44;CL:0002609,2.05e-13,6;CL:0002321,6.30e-10,70;CL:0002608,1.46e-07,3;CL:0002610,5.12e-07,3;CL:0002613,5.87e-07,3;CL:0000120,7.35e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.83e-35!71;UBERON:0003075!1.83e-35!71;UBERON:0007284!1.83e-35!71;UBERON:0001017!2.96e-34!73;UBERON:0005743!2.96e-34!73;UBERON:0000073!4.24e-34!75;UBERON:0001016!4.24e-34!75;UBERON:0004121!1.70e-32!102;UBERON:0000924!1.70e-32!102;UBERON:0006601!1.70e-32!102;UBERON:0000033!1.77e-32!63;UBERON:0002020!4.68e-32!34;UBERON:0001049!1.52e-29!52;UBERON:0005068!1.52e-29!52;UBERON:0006241!1.52e-29!52;UBERON:0007135!1.52e-29!52;UBERON:0003056!2.06e-28!49;UBERON:0000955!5.79e-28!50;UBERON:0006238!5.79e-28!50;UBERON:0002616!5.27e-27!49;UBERON:0002791!1.17e-26!29;UBERON:0003528!1.17e-26!29;UBERON:0001893!1.17e-26!29;UBERON:0003080!4.93e-21!40;UBERON:0002780!2.37e-20!39;UBERON:0001890!2.37e-20!39;UBERON:0006240!2.37e-20!39;UBERON:0007811!1.46e-19!86;UBERON:0000956!1.26e-18!21;UBERON:0001869!1.26e-18!21;UBERON:0000203!1.26e-18!21;UBERON:0000153!1.34e-16!94;UBERON:0002619!4.02e-14!17;UBERON:0002021!1.75e-11!10;UBERON:0000411!1.75e-11!10;UBERON:0001950!1.75e-11!10;UBERON:0002420!4.35e-09!8;UBERON:0007245!4.35e-09!8;UBERON:0010009!4.35e-09!8;UBERON:0010011!4.35e-09!8;UBERON:0000454!4.35e-09!8;UBERON:0003076!6.38e-09!12;UBERON:0003057!6.38e-09!12;UBERON:0000970!3.41e-08!9;UBERON:0000019!3.41e-08!9;UBERON:0000047!3.41e-08!9;UBERON:0004088!3.41e-08!9;UBERON:0002104!3.41e-08!9;UBERON:0001456!3.41e-08!9;UBERON:0003072!3.41e-08!9;UBERON:0003071!3.41e-08!9;UBERON:0004128!3.41e-08!9;UBERON:0002240!4.41e-07!6;UBERON:0005174!4.41e-07!6;UBERON:0001137!4.41e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.15e-46,34;UBERON:0000073,1.58e-41,54;UBERON:0003528,2.94e-37,29;UBERON:0002791,2.94e-37,29;UBERON:0001893,2.94e-37,29;UBERON:0002346,3.89e-37,64;UBERON:0003075,3.89e-37,64;UBERON:0007284,3.89e-37,64;UBERON:0001017,1.45e-36,73;UBERON:0001049,2.44e-35,52;UBERON:0005068,2.44e-35,52;UBERON:0006241,2.44e-35,52;UBERON:0007135,2.44e-35,52;UBERON:0001016,2.48e-35,75;UBERON:0004121,3.20e-34,95;UBERON:0000924,3.20e-34,95;UBERON:0006601,3.20e-34,95;UBERON:0003056,5.38e-33,49;UBERON:0010371,2.12e-31,73;UBERON:0002780,2.94e-30,39;UBERON:0001890,2.94e-30,39;UBERON:0006240,2.94e-30,39;UBERON:0000955,6.75e-30,47;UBERON:0006238,6.75e-30,47;UBERON:0000956,7.98e-30,21;UBERON:0001869,7.98e-30,21;UBERON:0000203,7.98e-30,21;UBERON:0003080,2.55e-29,40;UBERON:0002616,1.66e-28,46;UBERON:0010314,5.68e-23,92;UBERON:0002619,1.72e-22,17;UBERON:0002021,1.40e-17,10;UBERON:0000411,1.40e-17,10;UBERON:0001950,1.40e-17,10;UBERON:0000025,1.76e-11,114;UBERON:0004111,3.49e-10,122;UBERON:0001948,1.75e-09,5;UBERON:0002315,1.75e-09,5;UBERON:0002420,1.54e-08,8;UBERON:0007245,1.54e-08,8;UBERON:0010009,1.54e-08,8;UBERON:0010011,1.54e-08,8;UBERON:0000454,1.54e-08,8;UBERON:0002240,7.89e-08,6;UBERON:0005174,7.89e-08,6;UBERON:0001137,7.89e-08,6;UBERON:0000483,9.25e-08,174;UBERON:0011216,1.10e-07,194;UBERON:0000119,1.44e-07,176;UBERON:0004684,5.12e-07,3;UBERON:0002275,5.12e-07,3;UBERON:0001954,6.88e-07,7;UBERON:0003022,6.88e-07,7;UBERON:0002421,6.88e-07,7;UBERON:0000349,6.88e-07,7;UBERON:0002600,6.88e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38121212422995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,6.87875966922632,12.1667925232568,3.1691570175309,0,0,0,0,0,0,0.768436610643109,13.2722703754851,23.0860154547191,7.36137364729837,3.99911378165325,2.65042249141936,11.3916443269907,13.4183659425531,39.5264078242309,9.91042928994498,5.61824287574826,4.76180253094355,4.74790635828698,5.48925861614458,8.33461392890816,5.30447698102624,3.37657566019008,3.0559649555362,4.71405736757868,3.41692033917847,4.65998614563251,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,1.17112318804619,1.46612694769419,0,0,0,0,0.449371918214468,0.457500602818626,0.879580464790051,2.43354048269187,1.79000820131231,1.0389402227978,1.29793010454206,0,0,0,0.841767423545896,0.260240885925407,0.229902104433473,0.36012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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=392 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:65207173..65207198,+ | |||
|description=CAGE_peak_at_chr14:65207173..65207198,+ | |||
|id=chr14:65207173..65207198,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.27e-27!23;CL:0000337!3.27e-27!23;CL:0000540!2.54e-22!33;CL:0000047!2.54e-22!33;CL:0000031!2.54e-22!33;CL:0000404!2.54e-22!33;CL:0002319!2.04e-18!43;CL:0000221!9.18e-18!44;CL:0000133!9.18e-18!44;CL:0000393!2.15e-17!39;CL:0000211!2.15e-17!39;CL:0000055!2.04e-14!50;CL:0002609!6.65e-09!6;CL:0002321!1.20e-07!70;CL:0000220!1.20e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.47e-43,23;CL:0000337,4.47e-43,23;CL:0000540,4.79e-28,33;CL:0000047,4.79e-28,33;CL:0000031,4.79e-28,33;CL:0000404,4.79e-28,33;CL:0000393,9.70e-23,39;CL:0000211,9.70e-23,39;CL:0002319,4.97e-20,43;CL:0000221,1.98e-19,44;CL:0000133,1.98e-19,44;CL:0002609,2.05e-13,6;CL:0002321,6.30e-10,70;CL:0002608,1.46e-07,3;CL:0002610,5.12e-07,3;CL:0002613,5.87e-07,3;CL:0000120,7.35e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.83e-35!71;UBERON:0003075!1.83e-35!71;UBERON:0007284!1.83e-35!71;UBERON:0001017!2.96e-34!73;UBERON:0005743!2.96e-34!73;UBERON:0000073!4.24e-34!75;UBERON:0001016!4.24e-34!75;UBERON:0004121!1.70e-32!102;UBERON:0000924!1.70e-32!102;UBERON:0006601!1.70e-32!102;UBERON:0000033!1.77e-32!63;UBERON:0002020!4.68e-32!34;UBERON:0001049!1.52e-29!52;UBERON:0005068!1.52e-29!52;UBERON:0006241!1.52e-29!52;UBERON:0007135!1.52e-29!52;UBERON:0003056!2.06e-28!49;UBERON:0000955!5.79e-28!50;UBERON:0006238!5.79e-28!50;UBERON:0002616!5.27e-27!49;UBERON:0002791!1.17e-26!29;UBERON:0003528!1.17e-26!29;UBERON:0001893!1.17e-26!29;UBERON:0003080!4.93e-21!40;UBERON:0002780!2.37e-20!39;UBERON:0001890!2.37e-20!39;UBERON:0006240!2.37e-20!39;UBERON:0007811!1.46e-19!86;UBERON:0000956!1.26e-18!21;UBERON:0001869!1.26e-18!21;UBERON:0000203!1.26e-18!21;UBERON:0000153!1.34e-16!94;UBERON:0002619!4.02e-14!17;UBERON:0002021!1.75e-11!10;UBERON:0000411!1.75e-11!10;UBERON:0001950!1.75e-11!10;UBERON:0002420!4.35e-09!8;UBERON:0007245!4.35e-09!8;UBERON:0010009!4.35e-09!8;UBERON:0010011!4.35e-09!8;UBERON:0000454!4.35e-09!8;UBERON:0003076!6.38e-09!12;UBERON:0003057!6.38e-09!12;UBERON:0000970!3.41e-08!9;UBERON:0000019!3.41e-08!9;UBERON:0000047!3.41e-08!9;UBERON:0004088!3.41e-08!9;UBERON:0002104!3.41e-08!9;UBERON:0001456!3.41e-08!9;UBERON:0003072!3.41e-08!9;UBERON:0003071!3.41e-08!9;UBERON:0004128!3.41e-08!9;UBERON:0002240!4.41e-07!6;UBERON:0005174!4.41e-07!6;UBERON:0001137!4.41e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.15e-46,34;UBERON:0000073,1.58e-41,54;UBERON:0003528,2.94e-37,29;UBERON:0002791,2.94e-37,29;UBERON:0001893,2.94e-37,29;UBERON:0002346,3.89e-37,64;UBERON:0003075,3.89e-37,64;UBERON:0007284,3.89e-37,64;UBERON:0001017,1.45e-36,73;UBERON:0001049,2.44e-35,52;UBERON:0005068,2.44e-35,52;UBERON:0006241,2.44e-35,52;UBERON:0007135,2.44e-35,52;UBERON:0001016,2.48e-35,75;UBERON:0004121,3.20e-34,95;UBERON:0000924,3.20e-34,95;UBERON:0006601,3.20e-34,95;UBERON:0003056,5.38e-33,49;UBERON:0010371,2.12e-31,73;UBERON:0002780,2.94e-30,39;UBERON:0001890,2.94e-30,39;UBERON:0006240,2.94e-30,39;UBERON:0000955,6.75e-30,47;UBERON:0006238,6.75e-30,47;UBERON:0000956,7.98e-30,21;UBERON:0001869,7.98e-30,21;UBERON:0000203,7.98e-30,21;UBERON:0003080,2.55e-29,40;UBERON:0002616,1.66e-28,46;UBERON:0010314,5.68e-23,92;UBERON:0002619,1.72e-22,17;UBERON:0002021,1.40e-17,10;UBERON:0000411,1.40e-17,10;UBERON:0001950,1.40e-17,10;UBERON:0000025,1.76e-11,114;UBERON:0004111,3.49e-10,122;UBERON:0001948,1.75e-09,5;UBERON:0002315,1.75e-09,5;UBERON:0002420,1.54e-08,8;UBERON:0007245,1.54e-08,8;UBERON:0010009,1.54e-08,8;UBERON:0010011,1.54e-08,8;UBERON:0000454,1.54e-08,8;UBERON:0002240,7.89e-08,6;UBERON:0005174,7.89e-08,6;UBERON:0001137,7.89e-08,6;UBERON:0000483,9.25e-08,174;UBERON:0011216,1.10e-07,194;UBERON:0000119,1.44e-07,176;UBERON:0004684,5.12e-07,3;UBERON:0002275,5.12e-07,3;UBERON:0001954,6.88e-07,7;UBERON:0003022,6.88e-07,7;UBERON:0002421,6.88e-07,7;UBERON:0000349,6.88e-07,7;UBERON:0002600,6.88e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38121212422995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,6.87875966922632,12.1667925232568,3.1691570175309,0,0,0,0,0,0,0.768436610643109,13.2722703754851,23.0860154547191,7.36137364729837,3.99911378165325,2.65042249141936,11.3916443269907,13.4183659425531,39.5264078242309,9.91042928994498,5.61824287574826,4.76180253094355,4.74790635828698,5.48925861614458,8.33461392890816,5.30447698102624,3.37657566019008,3.0559649555362,4.71405736757868,3.41692033917847,4.65998614563251,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,1.17112318804619,1.46612694769419,0,0,0,0,0.449371918214468,0.457500602818626,0.879580464790051,2.43354048269187,1.79000820131231,1.0389402227978,1.29793010454206,0,0,0,0.841767423545896,0.260240885925407,0.229902104433473,0.360124259610698,1.35634336052144,1.49680298132921,3.07472928683639,3.37326208415024,4.13925393182425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,1.13195073617213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0.315508219416257,0.780877488593277,0.430846795465598,0,0.222798674082394,0,0,0,0,2.89189184779626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.51801474093653,5.06357760157895,6.30185064783336,11.5141632170271,3.42541259885321,2.2661816921691,2.02506750069542,3.15224842256954,3.17199686288943,4.65984280576638,0.103787347584177,0,0,0.486213434136588,0.209613162627982,0,0,0.618105171716683,0.962757628775446,0,0.25347929989024,0.188626341386076,0.37456602987953,0.192075457214608,0.17230640686684,0.476293691283074,0.231768651889711,0,0,0.441596760403192,0,0,0,0.290692833264657,0.376437521661322,0.0846146078916765,0.365855945745545,1.05227884575137,0.135804113845862,0,0,0,0.818462086339379,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:65207173..65207198,+ | |||
}} |
Latest revision as of 15:50, 4 August 2015
Short description: | p@chr14:65207173..65207198, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:65207173..65207198, + |
Coexpression cluster: | MCL_coexpression_mm9:392 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.47e-43 | 23 |
neuroblast (sensu Vertebrata) | 4.47e-43 | 23 |
neuron | 4.79e-28 | 33 |
neuronal stem cell | 4.79e-28 | 33 |
neuroblast | 4.79e-28 | 33 |
electrically signaling cell | 4.79e-28 | 33 |
electrically responsive cell | 9.70e-23 | 39 |
electrically active cell | 9.70e-23 | 39 |
neural cell | 4.97e-20 | 43 |
ectodermal cell | 1.98e-19 | 44 |
neurectodermal cell | 1.98e-19 | 44 |
neuron of cerebral cortex | 2.05e-13 | 6 |
embryonic cell | 6.30e-10 | 70 |
hippocampal neuron | 1.46e-07 | 3 |
raphe nuclei neuron | 5.12e-07 | 3 |
striatum neuron | 5.87e-07 | 3 |
granule cell | 7.35e-07 | 3 |