FFCP PHASE1:Mm9::chr7:152402163..152402164,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=723|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:152402163..152402164,+|id=chr7:152402163..152402164,+|ontology_enrichment_celltype=CL:0000068!4.90e-12!3;CL:0002202!4.90e-12!3;CL:0000069!4.90e-12!3;CL:0002632!4.90e-12!3;CL:0002368!4.90e-12!3;CL:0000307!4.90e-12!3;CL:0000377!4.90e-12!3;CL:0000349!1.13e-11!3;CL:0000351!1.13e-11!3;CL:0000050!1.31e-10!9;CL:0000553!2.00e-10!6;CL:0000556!2.00e-10!6;CL:0000063!1.91e-08!66;CL:0000548!4.80e-08!115;CL:0000004!4.80e-08!115;CL:0000255!4.80e-08!115;CL:0002371!9.52e-08!118;CL:0000325!1.38e-07!2;CL:0000217!1.38e-07!2;CL:0000328!1.38e-07!2;CL:0002573!1.38e-07!2;CL:0002376!1.38e-07!2;CL:0000218!1.38e-07!2;CL:0000692!1.38e-07!2;CL:0002377!1.38e-07!2;CL:0002375!1.38e-07!2;CL:0000144!1.83e-07!121;CL:0000012!1.83e-07!121;CL:0000839!3.01e-07!13|ontology_enrichment_celltype_v019_2=CL:0000068,2.34e-26,3;CL:0002202,2.34e-26,3;CL:0000069,2.34e-26,3;CL:0002632,2.34e-26,3;CL:0002368,2.34e-26,3;CL:0000307,2.34e-26,3;CL:0000377,2.34e-26,3;CL:0000050,2.26e-16,9;CL:0000553,4.51e-14,6;CL:0000556,4.51e-14,6;CL:0002027,4.82e-13,3;CL:0002006,4.82e-13,3;CL:0002024,4.82e-13,3;CL:0000839,1.89e-11,13;CL:0000763,2.32e-09,16;CL:0002031,4.25e-09,25;CL:0000049,6.30e-08,19;CL:0000988,4.12e-07,32;CL:0002032,4.12e-07,32;CL:0000037,4.12e-07,32;CL:0000837,4.12e-07,32;CL:0002320,7.50e-07,46;CL:0000134,7.50e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003126!4.90e-12!3;UBERON:0001005!4.90e-12!3;UBERON:0007196!4.90e-12!3;UBERON:0001558!4.90e-12!3;UBERON:0000358!1.13e-11!3;UBERON:0000307!1.13e-11!3;UBERON:0001962!6.70e-08!2;UBERON:0001961!6.70e-08!2;UBERON:0001744!6.70e-08!2|ontology_enrichment_uberon_v019_2=UBERON:0003126,2.34e-26,3;UBERON:0001005,2.34e-26,3;UBERON:0007196,2.34e-26,3;UBERON:0001558,2.34e-26,3;UBERON:0002384,7.50e-07,46|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,5.06188168474565,5.59649502502517,0.315462165358238,0,1.69755860719212,0,0,2.08959831311148,0.159992422793407,0.91763712426868,0,0,0,0.380046838912748,0,0,6.98533740805594,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0.226714680320357,0,0,0,0,0,0,0,0,0.779358013808606,1.06001872353102,0,0,0,0,1.08245520505607,1.01343946190039,2.02209778005913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,1.10992976687032,0.538283139656854,0.839423081820392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p@chr7:152402163..152402164,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=723 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:152402163..152402164,+ | |||
|description=CAGE_peak_at_chr7:152402163..152402164,+ | |||
|id=chr7:152402163..152402164,+ | |||
|ontology_enrichment_celltype=CL:0000068!4.90e-12!3;CL:0002202!4.90e-12!3;CL:0000069!4.90e-12!3;CL:0002632!4.90e-12!3;CL:0002368!4.90e-12!3;CL:0000307!4.90e-12!3;CL:0000377!4.90e-12!3;CL:0000349!1.13e-11!3;CL:0000351!1.13e-11!3;CL:0000050!1.31e-10!9;CL:0000553!2.00e-10!6;CL:0000556!2.00e-10!6;CL:0000063!1.91e-08!66;CL:0000548!4.80e-08!115;CL:0000004!4.80e-08!115;CL:0000255!4.80e-08!115;CL:0002371!9.52e-08!118;CL:0000325!1.38e-07!2;CL:0000217!1.38e-07!2;CL:0000328!1.38e-07!2;CL:0002573!1.38e-07!2;CL:0002376!1.38e-07!2;CL:0000218!1.38e-07!2;CL:0000692!1.38e-07!2;CL:0002377!1.38e-07!2;CL:0002375!1.38e-07!2;CL:0000144!1.83e-07!121;CL:0000012!1.83e-07!121;CL:0000839!3.01e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,2.34e-26,3;CL:0002202,2.34e-26,3;CL:0000069,2.34e-26,3;CL:0002632,2.34e-26,3;CL:0002368,2.34e-26,3;CL:0000307,2.34e-26,3;CL:0000377,2.34e-26,3;CL:0000050,2.26e-16,9;CL:0000553,4.51e-14,6;CL:0000556,4.51e-14,6;CL:0002027,4.82e-13,3;CL:0002006,4.82e-13,3;CL:0002024,4.82e-13,3;CL:0000839,1.89e-11,13;CL:0000763,2.32e-09,16;CL:0002031,4.25e-09,25;CL:0000049,6.30e-08,19;CL:0000988,4.12e-07,32;CL:0002032,4.12e-07,32;CL:0000037,4.12e-07,32;CL:0000837,4.12e-07,32;CL:0002320,7.50e-07,46;CL:0000134,7.50e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003126!4.90e-12!3;UBERON:0001005!4.90e-12!3;UBERON:0007196!4.90e-12!3;UBERON:0001558!4.90e-12!3;UBERON:0000358!1.13e-11!3;UBERON:0000307!1.13e-11!3;UBERON:0001962!6.70e-08!2;UBERON:0001961!6.70e-08!2;UBERON:0001744!6.70e-08!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,2.34e-26,3;UBERON:0001005,2.34e-26,3;UBERON:0007196,2.34e-26,3;UBERON:0001558,2.34e-26,3;UBERON:0002384,7.50e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,5.06188168474565,5.59649502502517,0.315462165358238,0,1.69755860719212,0,0,2.08959831311148,0.159992422793407,0.91763712426868,0,0,0,0.380046838912748,0,0,6.98533740805594,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0.226714680320357,0,0,0,0,0,0,0,0,0.779358013808606,1.06001872353102,0,0,0,0,1.08245520505607,1.01343946190039,2.02209778005913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,1.10992976687032,0.538283139656854,0.839423081820392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr7:152402163..152402164,+ | |||
}} |
Latest revision as of 15:48, 4 August 2015
Short description: | p@chr7:152402163..152402164, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:152402163..152402164, + |
Coexpression cluster: | MCL_coexpression_mm9:723 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 2.34e-26 | 3 |
epithelial cell of tracheobronchial tree | 2.34e-26 | 3 |
branched duct epithelial cell | 2.34e-26 | 3 |
epithelial cell of lower respiratory tract | 2.34e-26 | 3 |
respiratory epithelial cell | 2.34e-26 | 3 |
tracheal epithelial cell | 2.34e-26 | 3 |
tracheoblast | 2.34e-26 | 3 |
megakaryocyte-erythroid progenitor cell | 2.26e-16 | 9 |
megakaryocyte progenitor cell | 4.51e-14 | 6 |
megakaryocyte | 4.51e-14 | 6 |
CD9-positive, CD41-positive megakaryocyte cell | 4.82e-13 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 4.82e-13 | 3 |
Kit-positive megakaryocyte progenitor cell | 4.82e-13 | 3 |
myeloid lineage restricted progenitor cell | 1.89e-11 | 13 |
myeloid cell | 2.32e-09 | 16 |
hematopoietic lineage restricted progenitor cell | 4.25e-09 | 25 |
common myeloid progenitor | 6.30e-08 | 19 |
hematopoietic cell | 4.12e-07 | 32 |
hematopoietic oligopotent progenitor cell | 4.12e-07 | 32 |
hematopoietic stem cell | 4.12e-07 | 32 |
hematopoietic multipotent progenitor cell | 4.12e-07 | 32 |
connective tissue cell | 7.50e-07 | 46 |
mesenchymal cell | 7.50e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
trachea | 2.34e-26 | 3 |
respiratory airway | 2.34e-26 | 3 |
tracheobronchial tree | 2.34e-26 | 3 |
lower respiratory tract | 2.34e-26 | 3 |
connective tissue | 7.50e-07 | 46 |