FFCP PHASE1:Mm9::chr12:100188309..100188326,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=16|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:100188309..100188326,+|id=chr12:100188309..100188326,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!7.08e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.03e-16,9;UBERON:0000019,1.03e-16,9;UBERON:0000047,1.03e-16,9;UBERON:0010312,1.03e-16,9;UBERON:0004088,1.03e-16,9;UBERON:0002104,1.03e-16,9;UBERON:0001456,1.03e-16,9;UBERON:0003072,1.03e-16,9;UBERON:0004128,1.03e-16,9;UBERON:0003071,1.03e-16,9;UBERON:0001444,1.70e-13,11;UBERON:0003056,1.16e-12,49;UBERON:0000020,2.75e-12,12;UBERON:0001032,2.75e-12,12;UBERON:0004456,2.75e-12,12;UBERON:0000033,2.89e-11,13;UBERON:0005085,2.89e-11,13;UBERON:0002346,3.10e-10,64;UBERON:0003075,3.10e-10,64;UBERON:0007284,3.10e-10,64;UBERON:0004121,1.02e-08,95;UBERON:0000924,1.02e-08,95;UBERON:0006601,1.02e-08,95;UBERON:0010371,1.54e-08,73;UBERON:0002021,3.28e-07,10;UBERON:0000411,3.28e-07,10;UBERON:0001950,3.28e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0.383062014255563,0.307213066512487,0,0.0914876436024097,0,0,0,0.45839474333043,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0.301445281105245,0.705532242814229,0.125666591329675,0.247194967734374,0.144599356919912,0,0.970601099684455,0.441683036920787,0,0,1.17112318804619,0.83778682725382,0,0,0,0,0.898743836428936,1.83000241127451,0.753926112677186,0.695297280769106,0.767146371990992,1.0389402227978,0.811206315338788,0.712875546952214,0,0,2.10441855886474,1.43132487258974,0.229902104433473,0.360124259610698,1.35634336052144,1.29269348387523,2.0498195245576,1.68663104207512,10.0894314588216,0,0.756424320671277,0.527853372491847,0.43839146485515,1.66828349535359,0.348252166522167,0.61734640922383,0.398068533636986,0,0,0,0.414251545071004,0.469052119962192,0.180062061461015,0,0.196764231747404,0.771335564436891,0.465067889500816,0.268273401399619,0.700592054203017,0.493679549740441,0.820837320395476,0.162137619091711,0,0,0,0.630869845692382,0.617427674275707,0,0,0.639864751605702,0.928946687441754,0,0.403367049246685,0.22237804384487,0.380451252225118,0,0,0.251335208800269,0,0,0,0,0,0,1.14248512609729,0,0.610953983535943,1.55161989734101,0.911765658574141,0.822074982615345,0.147610147979602,1.09899109488962,0.370191491765402,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0.274561413188081,2.87536413054709,0,0,0,0,0,0.184753190166605,0,0.488894929326078,1.01847051465113,2.34690248288502,0.167506257441816,0.952174563544055,0.780534591431195,0.157635144106191,0.44292937929755,0.637819074629948,0.327726629431476,0,0.723245292907558,0,0,0,0.275936746304732,0.481651769963376,0.820481806145422,0,0.252470927204373,0,0.390438744296638,0.646270193198397,0.716906393857656,0.445597348164788,1.13230612315533,0.809621403349789,1.46127928955656,0.395287777946524,1.60660658210904,0.283880170416537,0.35613120733451,0.651547837414304,1.64970122972535,0,0.242780636154981,0.302323556964751,0.565815239267694,0,0.307435147943927,0.258428293168221,0,0,0,0,0,1.02131881726136,0.18006109403131,0,0,1.41872186913819,0.356737635204141,0.329098041204242,0.304464949114599,0.23467170806371,0,0,0.32977250588296,0,0.120625849856312,0.119372344003136,0.492422699235184,0,0.556275906031529,0.341741761595705,0.206386867963223,0,0,0.136694227721025,0.457556346413045,0,0,0.138199973804424,0,0,0.813277868507395,0.324016022465404,0.418176592028937,0.218362563746178,0.809186078308924,0.330613822901344,0,0.259229946583586,0.621339313086926,1.12738587736838,0,0.165458490457098,0.194451188344048,0,0.675824501963113,0.704143431874524,0.39061315453185,0.209718688851422,0.241584120826006,0.288030006257865,0,0.202725215290164,0.205421914329655,0.25984164595559,0.179026695667481,0,0.360586348559907,0.295379054349154,0.302899349844443,0.228620419965,0.201652370273681,0,0.0962118416403295,0.233753804363138,0.226730383615211,0,0,0,0.386379188064381,0,0.183151624267265,0,0,1.12950368523413,0.460325236507177,0.572895513439397,1.20297227640581,0,0,2.02506750069542,0.900642406448441,1.35942722695261,1.03552062350364,0,0.399024873401031,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0.824140228955577,0.64183841918363,0.505394423527595,0.760437899670719,0.377252682772152,0.187283014939765,0.128050304809739,0.402048282689293,0,0.115884325944855,0.38581844092741,0,0.147198920134397,0.342869252385415,0.177475806159338,0.715308569841963,0.581385666529314,0.0941093804153306,0.169229215783353,0.914639864363863,0.526139422875686,0.543216455383447,1.12228454331548,0.355905054372522,0.197008964751127,0,0.154936841185966,0.385813221962283,0.499621155875892,0.701794825336225,0.214871054048298,0.382576664137687,0,0.231867835620421|short_description=p@chr12:100188309..100188326,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=16 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:100188309..100188326,+ | |||
|description=CAGE_peak_at_chr12:100188309..100188326,+ | |||
|id=chr12:100188309..100188326,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!7.08e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.03e-16,9;UBERON:0000019,1.03e-16,9;UBERON:0000047,1.03e-16,9;UBERON:0010312,1.03e-16,9;UBERON:0004088,1.03e-16,9;UBERON:0002104,1.03e-16,9;UBERON:0001456,1.03e-16,9;UBERON:0003072,1.03e-16,9;UBERON:0004128,1.03e-16,9;UBERON:0003071,1.03e-16,9;UBERON:0001444,1.70e-13,11;UBERON:0003056,1.16e-12,49;UBERON:0000020,2.75e-12,12;UBERON:0001032,2.75e-12,12;UBERON:0004456,2.75e-12,12;UBERON:0000033,2.89e-11,13;UBERON:0005085,2.89e-11,13;UBERON:0002346,3.10e-10,64;UBERON:0003075,3.10e-10,64;UBERON:0007284,3.10e-10,64;UBERON:0004121,1.02e-08,95;UBERON:0000924,1.02e-08,95;UBERON:0006601,1.02e-08,95;UBERON:0010371,1.54e-08,73;UBERON:0002021,3.28e-07,10;UBERON:0000411,3.28e-07,10;UBERON:0001950,3.28e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0.383062014255563,0.307213066512487,0,0.0914876436024097,0,0,0,0.45839474333043,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0.301445281105245,0.705532242814229,0.125666591329675,0.247194967734374,0.144599356919912,0,0.970601099684455,0.441683036920787,0,0,1.17112318804619,0.83778682725382,0,0,0,0,0.898743836428936,1.83000241127451,0.753926112677186,0.695297280769106,0.767146371990992,1.0389402227978,0.811206315338788,0.712875546952214,0,0,2.10441855886474,1.43132487258974,0.229902104433473,0.360124259610698,1.35634336052144,1.29269348387523,2.0498195245576,1.68663104207512,10.0894314588216,0,0.756424320671277,0.527853372491847,0.43839146485515,1.66828349535359,0.348252166522167,0.61734640922383,0.398068533636986,0,0,0,0.414251545071004,0.469052119962192,0.180062061461015,0,0.196764231747404,0.771335564436891,0.465067889500816,0.268273401399619,0.700592054203017,0.493679549740441,0.820837320395476,0.162137619091711,0,0,0,0.630869845692382,0.617427674275707,0,0,0.639864751605702,0.928946687441754,0,0.403367049246685,0.22237804384487,0.380451252225118,0,0,0.251335208800269,0,0,0,0,0,0,1.14248512609729,0,0.610953983535943,1.55161989734101,0.911765658574141,0.822074982615345,0.147610147979602,1.09899109488962,0.370191491765402,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0.274561413188081,2.87536413054709,0,0,0,0,0,0.184753190166605,0,0.488894929326078,1.01847051465113,2.34690248288502,0.167506257441816,0.952174563544055,0.780534591431195,0.157635144106191,0.44292937929755,0.637819074629948,0.327726629431476,0,0.723245292907558,0,0,0,0.275936746304732,0.481651769963376,0.820481806145422,0,0.252470927204373,0,0.390438744296638,0.646270193198397,0.716906393857656,0.445597348164788,1.13230612315533,0.809621403349789,1.46127928955656,0.395287777946524,1.60660658210904,0.283880170416537,0.35613120733451,0.651547837414304,1.64970122972535,0,0.242780636154981,0.302323556964751,0.565815239267694,0,0.307435147943927,0.258428293168221,0,0,0,0,0,1.02131881726136,0.18006109403131,0,0,1.41872186913819,0.356737635204141,0.329098041204242,0.304464949114599,0.23467170806371,0,0,0.32977250588296,0,0.120625849856312,0.119372344003136,0.492422699235184,0,0.556275906031529,0.341741761595705,0.206386867963223,0,0,0.136694227721025,0.457556346413045,0,0,0.138199973804424,0,0,0.813277868507395,0.324016022465404,0.418176592028937,0.218362563746178,0.809186078308924,0.330613822901344,0,0.259229946583586,0.621339313086926,1.12738587736838,0,0.165458490457098,0.194451188344048,0,0.675824501963113,0.704143431874524,0.39061315453185,0.209718688851422,0.241584120826006,0.288030006257865,0,0.202725215290164,0.205421914329655,0.25984164595559,0.179026695667481,0,0.360586348559907,0.295379054349154,0.302899349844443,0.228620419965,0.201652370273681,0,0.0962118416403295,0.233753804363138,0.226730383615211,0,0,0,0.386379188064381,0,0.183151624267265,0,0,1.12950368523413,0.460325236507177,0.572895513439397,1.20297227640581,0,0,2.02506750069542,0.900642406448441,1.35942722695261,1.03552062350364,0,0.399024873401031,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0.824140228955577,0.64183841918363,0.505394423527595,0.760437899670719,0.377252682772152,0.187283014939765,0.128050304809739,0.402048282689293,0,0.115884325944855,0.38581844092741,0,0.147198920134397,0.342869252385415,0.177475806159338,0.715308569841963,0.581385666529314,0.0941093804153306,0.169229215783353,0.914639864363863,0.526139422875686,0.543216455383447,1.12228454331548,0.355905054372522,0.197008964751127,0,0.154936841185966,0.385813221962283,0.499621155875892,0.701794825336225,0.214871054048298,0.382576664137687,0,0.231867835620421 | |||
|short_description=p@chr12:100188309..100188326,+ | |||
}} |
Latest revision as of 13:47, 4 August 2015
Short description: | p@chr12:100188309..100188326, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:100188309..100188326, + |
Coexpression cluster: | MCL_coexpression_mm9:16 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 1.03e-16 | 9 |
camera-type eye | 1.03e-16 | 9 |
simple eye | 1.03e-16 | 9 |
immature eye | 1.03e-16 | 9 |
ocular region | 1.03e-16 | 9 |
visual system | 1.03e-16 | 9 |
face | 1.03e-16 | 9 |
optic cup | 1.03e-16 | 9 |
optic vesicle | 1.03e-16 | 9 |
eye primordium | 1.03e-16 | 9 |
subdivision of head | 1.70e-13 | 11 |
pre-chordal neural plate | 1.16e-12 | 49 |
sense organ | 2.75e-12 | 12 |
sensory system | 2.75e-12 | 12 |
entire sense organ system | 2.75e-12 | 12 |
head | 2.89e-11 | 13 |
ectodermal placode | 2.89e-11 | 13 |
neurectoderm | 3.10e-10 | 64 |
neural plate | 3.10e-10 | 64 |
presumptive neural plate | 3.10e-10 | 64 |
ectoderm-derived structure | 1.02e-08 | 95 |
ectoderm | 1.02e-08 | 95 |
presumptive ectoderm | 1.02e-08 | 95 |
ecto-epithelium | 1.54e-08 | 73 |
occipital lobe | 3.28e-07 | 10 |
visual cortex | 3.28e-07 | 10 |
neocortex | 3.28e-07 | 10 |