FFCP PHASE1:Mm9::chr7:148882547..148882558,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=273|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:148882547..148882558,+|id=chr7:148882547..148882558,+|ontology_enrichment_celltype=CL:0000473!1.15e-11!3;CL:0000627!1.15e-11!3;CL:0000682!1.15e-11!3;CL:0000239!2.82e-10!6;CL:0000677!2.82e-10!6;CL:0000212!2.82e-10!6;CL:0000584!2.82e-10!6;CL:0000075!8.23e-09!7;CL:0002563!7.47e-07!9;CL:0002251!7.47e-07!9|ontology_enrichment_celltype_v019_2=CL:0000239,1.93e-17,6;CL:0000677,1.93e-17,6;CL:0000584,1.93e-17,6;CL:0000682,1.46e-15,3;CL:0000075,4.68e-15,7;CL:0002563,7.23e-12,9;CL:0002251,7.23e-12,9;CL:0000066,2.50e-11,25;CL:0002076,2.28e-07,15;CL:0000473,3.27e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!9.77e-29!43;UBERON:0005409!2.50e-22!59;UBERON:0001242!1.22e-16!13;UBERON:0000060!1.22e-16!13;UBERON:0001262!1.22e-16!13;UBERON:0004786!1.22e-16!13;UBERON:0000344!2.92e-14!15;UBERON:0000331!9.81e-11!3;UBERON:0002116!9.81e-11!3;UBERON:0001204!9.81e-11!3;UBERON:0001168!9.81e-11!3;UBERON:0004923!1.85e-08!24;UBERON:0004921!2.43e-08!126;UBERON:0004185!2.43e-08!126;UBERON:0001007!3.79e-08!128;UBERON:0001555!3.79e-08!128;UBERON:0007026!3.79e-08!128;UBERON:0004119!5.84e-08!130;UBERON:0000925!5.84e-08!130;UBERON:0006595!5.84e-08!130;UBERON:0003350!7.47e-07!9;UBERON:0004808!7.47e-07!9;UBERON:0001277!7.47e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0003350,7.23e-12,9;UBERON:0004808,7.23e-12,9;UBERON:0001277,7.23e-12,9;UBERON:0000485,7.89e-10,11;UBERON:0000160,4.19e-09,31;UBERON:0005409,1.83e-08,47;UBERON:0001242,2.06e-08,13;UBERON:0001262,2.06e-08,13;UBERON:0004786,2.06e-08,13;UBERON:0000344,2.28e-07,15|phase1_expression=0,0,0,0.60492842261366,1.50268718983904,3.3575854382378,5.60670337429262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57423196411502,1.29228598847722,1.50829862880122,0.950117097281869,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0.264450566663544,0,0,0,0.403367049246685,0,0.190225626112559,0.474529061544512,0.329397909448022,0.251335208800269,0,0.38992817423824,0.898819408654221,1.08069024937347,0.995706366271836,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16653475962614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr7:148882547..148882558,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=273 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:148882547..148882558,+ | |||
|description=CAGE_peak_at_chr7:148882547..148882558,+ | |||
|id=chr7:148882547..148882558,+ | |||
|ontology_enrichment_celltype=CL:0000473!1.15e-11!3;CL:0000627!1.15e-11!3;CL:0000682!1.15e-11!3;CL:0000239!2.82e-10!6;CL:0000677!2.82e-10!6;CL:0000212!2.82e-10!6;CL:0000584!2.82e-10!6;CL:0000075!8.23e-09!7;CL:0002563!7.47e-07!9;CL:0002251!7.47e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.93e-17,6;CL:0000677,1.93e-17,6;CL:0000584,1.93e-17,6;CL:0000682,1.46e-15,3;CL:0000075,4.68e-15,7;CL:0002563,7.23e-12,9;CL:0002251,7.23e-12,9;CL:0000066,2.50e-11,25;CL:0002076,2.28e-07,15;CL:0000473,3.27e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!9.77e-29!43;UBERON:0005409!2.50e-22!59;UBERON:0001242!1.22e-16!13;UBERON:0000060!1.22e-16!13;UBERON:0001262!1.22e-16!13;UBERON:0004786!1.22e-16!13;UBERON:0000344!2.92e-14!15;UBERON:0000331!9.81e-11!3;UBERON:0002116!9.81e-11!3;UBERON:0001204!9.81e-11!3;UBERON:0001168!9.81e-11!3;UBERON:0004923!1.85e-08!24;UBERON:0004921!2.43e-08!126;UBERON:0004185!2.43e-08!126;UBERON:0001007!3.79e-08!128;UBERON:0001555!3.79e-08!128;UBERON:0007026!3.79e-08!128;UBERON:0004119!5.84e-08!130;UBERON:0000925!5.84e-08!130;UBERON:0006595!5.84e-08!130;UBERON:0003350!7.47e-07!9;UBERON:0004808!7.47e-07!9;UBERON:0001277!7.47e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,7.23e-12,9;UBERON:0004808,7.23e-12,9;UBERON:0001277,7.23e-12,9;UBERON:0000485,7.89e-10,11;UBERON:0000160,4.19e-09,31;UBERON:0005409,1.83e-08,47;UBERON:0001242,2.06e-08,13;UBERON:0001262,2.06e-08,13;UBERON:0004786,2.06e-08,13;UBERON:0000344,2.28e-07,15 | |||
|phase1_expression=0,0,0,0.60492842261366,1.50268718983904,3.3575854382378,5.60670337429262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57423196411502,1.29228598847722,1.50829862880122,0.950117097281869,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0.264450566663544,0,0,0,0.403367049246685,0,0.190225626112559,0.474529061544512,0.329397909448022,0.251335208800269,0,0.38992817423824,0.898819408654221,1.08069024937347,0.995706366271836,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16653475962614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:148882547..148882558,+ | |||
}} |
Latest revision as of 13:15, 4 August 2015
Short description: | p@chr7:148882547..148882558, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:148882547..148882558, + |
Coexpression cluster: | MCL_coexpression_mm9:273 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.93e-17 | 6 |
gut absorptive cell | 1.93e-17 | 6 |
enterocyte | 1.93e-17 | 6 |
M cell of gut | 1.46e-15 | 3 |
columnar/cuboidal epithelial cell | 4.68e-15 | 7 |
intestinal epithelial cell | 7.23e-12 | 9 |
epithelial cell of alimentary canal | 7.23e-12 | 9 |
epithelial cell | 2.50e-11 | 25 |
endo-epithelial cell | 2.28e-07 | 15 |
defensive cell | 3.27e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 7.23e-12 | 9 |
gastrointestinal system epithelium | 7.23e-12 | 9 |
intestinal epithelium | 7.23e-12 | 9 |
simple columnar epithelium | 7.89e-10 | 11 |
intestine | 4.19e-09 | 31 |
gastrointestinal system | 1.83e-08 | 47 |
intestinal mucosa | 2.06e-08 | 13 |
wall of intestine | 2.06e-08 | 13 |
gastrointestinal system mucosa | 2.06e-08 | 13 |
mucosa | 2.28e-07 | 15 |