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{{FFCP|EntrezGene=268480|HGNC=|MCL_coexpression_id=1610|UniProt=Q68EF8|association_with_transcript=-13bp_to_ENSMUST00000107479,NM_001080925,uc007lhr.1_5end|description=CAGE_peak_3_at_Rapgefl1_5end|id=chr11:98698076..98698085,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.74e-10!52;UBERON:0005068!3.74e-10!52;UBERON:0006241!3.74e-10!52;UBERON:0007135!3.74e-10!52;UBERON:0000955!1.53e-09!50;UBERON:0006238!1.53e-09!50;UBERON:0000033!1.62e-09!63;UBERON:0002616!5.34e-09!49;UBERON:0003080!6.96e-09!40;UBERON:0002020!1.20e-08!34;UBERON:0002780!1.80e-08!39;UBERON:0001890!1.80e-08!39;UBERON:0006240!1.80e-08!39;UBERON:0003056!6.24e-08!49;UBERON:0002791!8.69e-08!29;UBERON:0003528!8.69e-08!29;UBERON:0001893!8.69e-08!29;UBERON:0002021!1.23e-07!10;UBERON:0000411!1.23e-07!10;UBERON:0001950!1.23e-07!10;UBERON:0000956!1.52e-07!21;UBERON:0001869!1.52e-07!21;UBERON:0000203!1.52e-07!21;UBERON:0002619!2.41e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002021,8.20e-15,10;UBERON:0000411,8.20e-15,10;UBERON:0001950,8.20e-15,10;UBERON:0002619,3.56e-13,17;UBERON:0000955,5.40e-12,47;UBERON:0006238,5.40e-12,47;UBERON:0000956,9.78e-12,21;UBERON:0001869,9.78e-12,21;UBERON:0000203,9.78e-12,21;UBERON:0000073,1.86e-11,54;UBERON:0010371,2.16e-11,73;UBERON:0002020,3.01e-11,34;UBERON:0001049,3.46e-11,52;UBERON:0005068,3.46e-11,52;UBERON:0006241,3.46e-11,52;UBERON:0007135,3.46e-11,52;UBERON:0002616,5.18e-11,46;UBERON:0003528,5.90e-11,29;UBERON:0002791,5.90e-11,29;UBERON:0001893,5.90e-11,29;UBERON:0004121,9.05e-10,95;UBERON:0000924,9.05e-10,95;UBERON:0006601,9.05e-10,95;UBERON:0003080,1.03e-09,40;UBERON:0001017,4.69e-09,73;UBERON:0002780,5.29e-09,39;UBERON:0001890,5.29e-09,39;UBERON:0006240,5.29e-09,39;UBERON:0001016,1.30e-08,75;UBERON:0000014,5.82e-08,5;UBERON:0001003,5.82e-08,5;UBERON:0002097,5.82e-08,5;UBERON:0002199,5.82e-08,5;UBERON:0007029,5.82e-08,5;UBERON:0007376,5.82e-08,5;UBERON:0002416,5.82e-08,5;UBERON:0007383,5.82e-08,5;UBERON:0002346,7.59e-08,64;UBERON:0003075,7.59e-08,64;UBERON:0007284,7.59e-08,64;UBERON:0003056,5.61e-07,49|phase1_expression=1.28119077683835,2.79180326111489,0.909998478779072,3.93203474698879,5.00895729946347,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0.315462165358238,0,0,1.02051948181284,0.0992909512008853,0,1.11994695955385,0.68822784320151,2.8711598205751,0.430761996159075,0.430942465371778,1.33016393619462,1.26015064879965,0.221730510655305,0,0.61506478758457,0,0,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0,0,0.439372365468944,0,0,0,0.167782606057736,0,0,0.257259436035947,0,0,0.202316460859598,1.05798195854407,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0.405017814995072,0.630974884054146,1.42825492201902,2.65042249141936,0.122490799214954,0.383381884072945,1.83843757322004,0,1.0214987046815,0.614426133024974,0.659431438650969,0.914876436024097,1.04182674111352,0,0,1.22238598221448,0,0.854230084794618,0.931997229126503,0,0,0.289864488701678,0,0,0,0,0,0,0.340860645156116,0,0.35333957451034,0.14084341977668,0,2.54805239706646,0,0,0.253359865475099,0.505524445014783,0.11418387971906,0.258937883647172,0.148442139064825,0,0,0,0,0.23517741427141,0.125666591329675,0,0,0,0.323533699894818,0.220841518460394,0,0,2.34224637609238,1.8850203613211,2.29911349687732,0,0,0,1.3481157546434,0.457500602818626,1.50785222535437,2.25971616249959,1.27857728665165,1.24672826735736,1.94689515681309,0.203678727700633,0.124406970610093,0,0.210441855886474,0.130120442962704,0.919608417733892,0.720248519221397,0,0.272145996605311,0,0.281105173679186,0.517406741478031,0.215567992932842,0.567318240503458,0.703804496655795,1.31517439456545,0.556094498451196,3.1342694986995,2.05782136407943,0.199034266818493,0,0.257347907114715,0,0,0,0.180062061461015,0,0.196764231747404,0,0,0.268273401399619,0.116765342367169,0,0.164167464079095,0,0.292399974850665,0.219550115291051,0,4.20579897128254,1.3377599609307,1.98251269790279,0.264450566663544,0.213288250535234,0.232236671860439,0.128867461322093,0,0.667134131534611,0.190225626112559,0.474529061544512,0.329397909448022,1.00534083520108,0.198956472041151,0.58489226135736,0,0.864552199498777,1.7922714592893,0.379335801906163,0.114248512609729,0,0.407302655690628,0,0.280543279561274,0.189709611372772,0.442830443938806,0.156998727841375,0.123397163921801,0.296452627087149,0.166845105716094,0.196558995113203,0,0.202860121388503,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0.369506380333209,0,0.162964976442026,0,0.234690248288502,0.167506257441816,0,0.975668239288994,0.157635144106191,0,0.159454768657487,0.163863314715738,0,0.433947175744535,0,0,0,0,0.321101179975584,1.64096361229084,0.163934945376675,0.504941854408746,0,0,0,0.238968797952552,0,0,0.809621403349789,0,0,3.53453448063988,0.283880170416537,0.35613120733451,0.977321756121456,0.329940245945071,0,0,0,0,0.295301892880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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:268480
|HGNC=
|MCL_coexpression_id=1610
|TSSclassifier=NA
|UniProt=uniprot:Q68EF8
|association_with_transcript=-13bp_to_ENSMUST00000107479,NM_001080925,uc007lhr.1_5end
|cluster_id=chr11:98698076..98698085,+
|description=CAGE_peak_3_at_Rapgefl1_5end
|id=chr11:98698076..98698085,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!3.74e-10!52;UBERON:0005068!3.74e-10!52;UBERON:0006241!3.74e-10!52;UBERON:0007135!3.74e-10!52;UBERON:0000955!1.53e-09!50;UBERON:0006238!1.53e-09!50;UBERON:0000033!1.62e-09!63;UBERON:0002616!5.34e-09!49;UBERON:0003080!6.96e-09!40;UBERON:0002020!1.20e-08!34;UBERON:0002780!1.80e-08!39;UBERON:0001890!1.80e-08!39;UBERON:0006240!1.80e-08!39;UBERON:0003056!6.24e-08!49;UBERON:0002791!8.69e-08!29;UBERON:0003528!8.69e-08!29;UBERON:0001893!8.69e-08!29;UBERON:0002021!1.23e-07!10;UBERON:0000411!1.23e-07!10;UBERON:0001950!1.23e-07!10;UBERON:0000956!1.52e-07!21;UBERON:0001869!1.52e-07!21;UBERON:0000203!1.52e-07!21;UBERON:0002619!2.41e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0002021,8.20e-15,10;UBERON:0000411,8.20e-15,10;UBERON:0001950,8.20e-15,10;UBERON:0002619,3.56e-13,17;UBERON:0000955,5.40e-12,47;UBERON:0006238,5.40e-12,47;UBERON:0000956,9.78e-12,21;UBERON:0001869,9.78e-12,21;UBERON:0000203,9.78e-12,21;UBERON:0000073,1.86e-11,54;UBERON:0010371,2.16e-11,73;UBERON:0002020,3.01e-11,34;UBERON:0001049,3.46e-11,52;UBERON:0005068,3.46e-11,52;UBERON:0006241,3.46e-11,52;UBERON:0007135,3.46e-11,52;UBERON:0002616,5.18e-11,46;UBERON:0003528,5.90e-11,29;UBERON:0002791,5.90e-11,29;UBERON:0001893,5.90e-11,29;UBERON:0004121,9.05e-10,95;UBERON:0000924,9.05e-10,95;UBERON:0006601,9.05e-10,95;UBERON:0003080,1.03e-09,40;UBERON:0001017,4.69e-09,73;UBERON:0002780,5.29e-09,39;UBERON:0001890,5.29e-09,39;UBERON:0006240,5.29e-09,39;UBERON:0001016,1.30e-08,75;UBERON:0000014,5.82e-08,5;UBERON:0001003,5.82e-08,5;UBERON:0002097,5.82e-08,5;UBERON:0002199,5.82e-08,5;UBERON:0007029,5.82e-08,5;UBERON:0007376,5.82e-08,5;UBERON:0002416,5.82e-08,5;UBERON:0007383,5.82e-08,5;UBERON:0002346,7.59e-08,64;UBERON:0003075,7.59e-08,64;UBERON:0007284,7.59e-08,64;UBERON:0003056,5.61e-07,49
|phase1_expression=1.28119077683835,2.79180326111489,0.909998478779072,3.93203474698879,5.00895729946347,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0.315462165358238,0,0,1.02051948181284,0.0992909512008853,0,1.11994695955385,0.68822784320151,2.8711598205751,0.430761996159075,0.430942465371778,1.33016393619462,1.26015064879965,0.221730510655305,0,0.61506478758457,0,0,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0,0,0.439372365468944,0,0,0,0.167782606057736,0,0,0.257259436035947,0,0,0.202316460859598,1.05798195854407,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0.405017814995072,0.630974884054146,1.42825492201902,2.65042249141936,0.122490799214954,0.383381884072945,1.83843757322004,0,1.0214987046815,0.614426133024974,0.659431438650969,0.914876436024097,1.04182674111352,0,0,1.22238598221448,0,0.854230084794618,0.931997229126503,0,0,0.289864488701678,0,0,0,0,0,0,0.340860645156116,0,0.35333957451034,0.14084341977668,0,2.54805239706646,0,0,0.253359865475099,0.505524445014783,0.11418387971906,0.258937883647172,0.148442139064825,0,0,0,0,0.23517741427141,0.125666591329675,0,0,0,0.323533699894818,0.220841518460394,0,0,2.34224637609238,1.8850203613211,2.29911349687732,0,0,0,1.3481157546434,0.457500602818626,1.50785222535437,2.25971616249959,1.27857728665165,1.24672826735736,1.94689515681309,0.203678727700633,0.124406970610093,0,0.210441855886474,0.130120442962704,0.919608417733892,0.720248519221397,0,0.272145996605311,0,0.281105173679186,0.517406741478031,0.215567992932842,0.567318240503458,0.703804496655795,1.31517439456545,0.556094498451196,3.1342694986995,2.05782136407943,0.199034266818493,0,0.257347907114715,0,0,0,0.180062061461015,0,0.196764231747404,0,0,0.268273401399619,0.116765342367169,0,0.164167464079095,0,0.292399974850665,0.219550115291051,0,4.20579897128254,1.3377599609307,1.98251269790279,0.264450566663544,0.213288250535234,0.232236671860439,0.128867461322093,0,0.667134131534611,0.190225626112559,0.474529061544512,0.329397909448022,1.00534083520108,0.198956472041151,0.58489226135736,0,0.864552199498777,1.7922714592893,0.379335801906163,0.114248512609729,0,0.407302655690628,0,0.280543279561274,0.189709611372772,0.442830443938806,0.156998727841375,0.123397163921801,0.296452627087149,0.166845105716094,0.196558995113203,0,0.202860121388503,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0.369506380333209,0,0.162964976442026,0,0.234690248288502,0.167506257441816,0,0.975668239288994,0.157635144106191,0,0.159454768657487,0.163863314715738,0,0.433947175744535,0,0,0,0,0.321101179975584,1.64096361229084,0.163934945376675,0.504941854408746,0,0,0,0.238968797952552,0,0,0.809621403349789,0,0,3.53453448063988,0.283880170416537,0.35613120733451,0.977321756121456,0.329940245945071,0,0,0,0,0.295301892880773,0,0,0.727067458955011,0.356497378384721,0,3.16255825724996,0,0.340439605753788,0.36012218806262,0.388076051348264,0.214337035031592,0.354680467284547,0.356737635204141,0.329098041204242,0.304464949114599,0,0,0.441056796109924,2.14352128823924,2.09903754704677,2.95533332147964,2.14870219205646,3.11867709515616,1.7488850197791,0.556275906031529,0,0.412773735926445,0,0,0,0,0,0,0,0.954670618015114,0.474503990371703,0.406638934253697,1.08005340821801,1.67270636811575,2.40198820120795,1.61837215661785,1.90102948168273,2.09404753587224,0.90730481304255,0.621339313086926,0,0.299033092087958,0.330916980914195,0.388902376688095,0.387479470433193,0.506868376472335,0.352071715937262,0,0.734015410979976,0,0.864090018773596,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,1.81384306892169,0,0,0,2.89784391048286,1.12609485270709,0.915758121336325,4.50173596066038,0.501572104035363,1.6942555278512,2.76195141904306,4.01026859407578,4.1244763762485,4.11049511862385,1.5107877947794,2.70009000092722,2.2516060161211,3.62513927187364,2.5888015587591,0.207574695168353,0.798049746802062,0.170733605754134,0.729320151204882,0.838452650511929,0.919217542250071,0.888986911206461,0.206035057238894,0.962757628775446,0.252697211763798,0.25347929989024,0.754505365544305,0.468207537349412,0.640251524048693,0.689225627467359,0,0.927074607558844,0.77163688185482,1.23625770240992,0.588795680537589,0.342869252385415,0.532427418478012,0.238436189947321,0.290692833264657,0.470546902076653,0.423073039458382,0.914639864363863,0.263069711437843,0.271608227691724,0,0.711810108745045,1.18205378850676,0,0.929621047115796,0.385813221962283,0.749431733813838,0.233931608445408,1.28922632428979,0.382576664137687,0.441182838239031,0.463735671240843
|short_description=p3@Rapgefl1
}}

Revision as of 12:50, 4 August 2015

Short description:p3@Rapgefl1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rapgefl1_5end
Coexpression cluster:MCL_coexpression_mm9:1610
Association with transcript: -13bp_to_ENSMUST00000107479, NM_001080925, uc007lhr.1_5end
EntrezGene:268480
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Rapgefl1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.93
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B91.33
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H72.30
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F11.51
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B52.06
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E84.21
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A31.64
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C32.14
skin, neonate N00.CNhs11124.650-25G42.10
skin, neonate N03.CNhs11215.662-22H32.96
skin, neonate N06.CNhs11097.693-20I52.15
skin, neonate N10.CNhs11108.762-6C43.12
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B81.62
stomach, neonate N07.CNhs11210.718-18A91.90
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.90
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D54.50
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.12
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
occipital lobe8.20e-1510
visual cortex8.20e-1510
neocortex8.20e-1510
regional part of cerebral cortex3.56e-1317
brain5.40e-1247
future brain5.40e-1247
cerebral cortex9.78e-1221
cerebral hemisphere9.78e-1221
pallium9.78e-1221
regional part of nervous system1.86e-1154
ecto-epithelium2.16e-1173
gray matter3.01e-1134
neural tube3.46e-1152
neural rod3.46e-1152
future spinal cord3.46e-1152
neural keel3.46e-1152
regional part of brain5.18e-1146
brain grey matter5.90e-1129
regional part of telencephalon5.90e-1129
telencephalon5.90e-1129
ectoderm-derived structure9.05e-1095
ectoderm9.05e-1095
presumptive ectoderm9.05e-1095
anterior neural tube1.03e-0940
central nervous system4.69e-0973
regional part of forebrain5.29e-0939
forebrain5.29e-0939
future forebrain5.29e-0939
nervous system1.30e-0875
zone of skin5.82e-085
skin epidermis5.82e-085
skin of body5.82e-085
integument5.82e-085
surface5.82e-085
outer epithelium5.82e-085
integumental system5.82e-085
enveloping layer of ectoderm5.82e-085
neurectoderm7.59e-0864
neural plate7.59e-0864
presumptive neural plate7.59e-0864
pre-chordal neural plate5.61e-0749
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