FFCP PHASE1:Mm9::chr11:96147952..96147967,+: Difference between revisions
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{{FFCP|EntrezGene=15415|HGNC=|MCL_coexpression_id=1601|UniProt=P09024|association_with_transcript=0bp_to_NM_010460,uc007lbr.1_5end|description=CAGE_peak_1_at_Hoxb7_5end|id=chr11:96147952..96147967,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000489!2.00e-15!21;UBERON:0001008!3.16e-11!17;UBERON:0006554!1.09e-10!16;UBERON:0002113!1.34e-10!14;UBERON:0003918!1.34e-10!14;UBERON:0005095!1.34e-10!14;UBERON:0007687!1.34e-10!14;UBERON:0003064!3.14e-09!14;UBERON:0005177!3.80e-08!85;UBERON:0002342!1.41e-07!10;UBERON:0005062!1.41e-07!10;UBERON:0002100!2.79e-07!98|ontology_enrichment_uberon_v019_2=UBERON:0000489,8.41e-19,21;UBERON:0002113,8.46e-13,14;UBERON:0003918,8.46e-13,14;UBERON:0011143,8.46e-13,14;UBERON:0005095,8.46e-13,14;UBERON:0007687,8.46e-13,14;UBERON:0001008,1.29e-10,19;UBERON:0003064,3.29e-10,14;UBERON:0006554,5.84e-10,18;UBERON:0002369,4.04e-07,7;UBERON:0006858,4.04e-07,7;UBERON:0002240,6.23e-07,6;UBERON:0005174,6.23e-07,6;UBERON:0001137,6.23e-07,6|phase1_expression=0,0.697950815278722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91199134694921,0.0992909512008853,0,0.159992422793407,0.22940928106717,0,0.430761996159075,0.646413698057667,1.33016393619462,0.252030129759931,2.21730510655305,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,14.7299277031425,14.6996550268296,12.2976323948327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,23.9946826899195,29.5963844875162,0,0,0,0,0,0,0,0,0,0,0,0,38.5963446970505,37.5861237309632,38.0254869483613,0.302904773332736,1.13357340160178,2.6087803983151,0.860423876981386,0,0,0,0,1.26399978118577,1.02258193546835,1.55871602761721,1.41335829804136,0,2.56652954828636,0,0,0.432982082022428,0,0,3.53970027129086,0,13.8051189330287,9.88866362566974,10.3518262626128,14.9900073216438,21.2518923179198,10.8181610564848,19.35265506477,0,1.87979163995885,0,0.485300549842228,0.441683036920787,0.484875253135222,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,7.84163101647435,23.5129174453076,109.681677160215,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0.657587197282725,0,1.0447564995665,0.411564272815887,4.57778813682534,0,0,0,0,0,0.180062061461015,0,0,0,0.232533944750408,0.268273401399619,0,0,0,0,0.146199987425332,0,0,0,0,0,0.264450566663544,8.53153002140936,2.55460339046482,1.80414445850931,0.80673409849337,1.77902435075896,1.90225626112559,2.37264530772256,1.97638745668813,4.77536896720512,0.596869416123452,1.36474860983384,0.898819408654221,1.94524244887225,1.99141273254367,10.4317345524195,15.6520462275328,13.5249282807697,15.8848035719345,18.4254862809244,12.4841759404767,16.6312092636797,12.5468625782662,14.2868842335651,9.00799296629144,0,0,0.393117990226406,0,0,0.241177159752417,0,0,0,0,0,0,0,0.252578877947112,0,0,0.369506380333209,1.32643988239339,0.488894929326078,1.69745085775188,0.234690248288502,0.837531287209079,0.238043640886014,0.585400943573396,0.630540576424764,0.664394068946325,0.637819074629948,0.655453258862952,0.345369963731791,0.723245292907558,0,0,0,0.275936746304732,5.29816946959713,2.93029216480508,0,0.504941854408746,5.36363973007636,5.46614242015294,7.97066571611356,0,0,0.849229592366497,2.83367491172426,2.04579100537918,1.18586333383957,0,3.12268187458191,6.23229612835393,2.11753047159649,9.40329700943452,0,2.18502572539483,0.302323556964751,0.754420319023592,1.77181135728464,1.84461088766356,1.55056975900933,0.727067458955011,0.356497378384721,1.58018378967908,1.05418608574999,1.03135543248187,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0.704015124191131,0.42366414172764,0.661585194164886,3.2977250588296,0.968786560175433,3.98065304525829,4.53614907211919,4.59594519286172,1.7488850197791,11.8672193286726,0.683483523191411,2.27025554759545,0.740778109478847,0.376736914009382,0.410082683163076,0.228778173206523,0,0,0,0,3.95419991976419,3.25311147402958,3.45617090629764,2.92723614420256,2.62035076495413,1.61837215661785,1.32245529160537,1.57053565190418,3.36998930558661,0,0,0.448549638131936,1.32366792365678,0,0.645799117388655,0.168956125490778,0.234714477291508,3.51551839078665,0.104859344425711,0.241584120826006,2.30424005006292,0,0.405450430580328,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,2.70465431645067,7.3196165425961,12.454310450174,7.28852488868824,8.02515366456581,0,0,0,0,0,0,0,0,0,0,3.1136204275253,1.59609949360412,3.75613932659095,2.43106717068294,1.25767897576789,1.65459157605013,2.00022055021454,3.09052585858341,1.28367683836726,1.51618327058278,2.5347929989024,1.69763707247469,2.62196220915671,1.60062881012173,1.89537047553524,0.952587382566147,1.39061191133827,1.73618298417335,1.64834360321323,2.20798380201596,1.02860775715625,2.66213709239006,2.38436189947321,2.18019624948493,1.59985946706062,1.4384483341585,1.64635175585495,0.526139422875686,2.03706170768793,0.561142271657738,1.66089025373844,1.18205378850676,2.45538625901814,1.08455788830176,1.92906610981141,0.249810577937946,1.16965804222704,0.859484216193193,1.53030665655075,1.10295709559758,1.39120701372253|short_description=p1@Hoxb7}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:15415 | |||
|HGNC= | |||
|MCL_coexpression_id=1601 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P09024 | |||
|association_with_transcript=0bp_to_NM_010460,uc007lbr.1_5end | |||
|cluster_id=chr11:96147952..96147967,+ | |||
|description=CAGE_peak_1_at_Hoxb7_5end | |||
|id=chr11:96147952..96147967,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!2.00e-15!21;UBERON:0001008!3.16e-11!17;UBERON:0006554!1.09e-10!16;UBERON:0002113!1.34e-10!14;UBERON:0003918!1.34e-10!14;UBERON:0005095!1.34e-10!14;UBERON:0007687!1.34e-10!14;UBERON:0003064!3.14e-09!14;UBERON:0005177!3.80e-08!85;UBERON:0002342!1.41e-07!10;UBERON:0005062!1.41e-07!10;UBERON:0002100!2.79e-07!98 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,8.41e-19,21;UBERON:0002113,8.46e-13,14;UBERON:0003918,8.46e-13,14;UBERON:0011143,8.46e-13,14;UBERON:0005095,8.46e-13,14;UBERON:0007687,8.46e-13,14;UBERON:0001008,1.29e-10,19;UBERON:0003064,3.29e-10,14;UBERON:0006554,5.84e-10,18;UBERON:0002369,4.04e-07,7;UBERON:0006858,4.04e-07,7;UBERON:0002240,6.23e-07,6;UBERON:0005174,6.23e-07,6;UBERON:0001137,6.23e-07,6 | |||
|phase1_expression=0,0.697950815278722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91199134694921,0.0992909512008853,0,0.159992422793407,0.22940928106717,0,0.430761996159075,0.646413698057667,1.33016393619462,0.252030129759931,2.21730510655305,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,14.7299277031425,14.6996550268296,12.2976323948327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,23.9946826899195,29.5963844875162,0,0,0,0,0,0,0,0,0,0,0,0,38.5963446970505,37.5861237309632,38.0254869483613,0.302904773332736,1.13357340160178,2.6087803983151,0.860423876981386,0,0,0,0,1.26399978118577,1.02258193546835,1.55871602761721,1.41335829804136,0,2.56652954828636,0,0,0.432982082022428,0,0,3.53970027129086,0,13.8051189330287,9.88866362566974,10.3518262626128,14.9900073216438,21.2518923179198,10.8181610564848,19.35265506477,0,1.87979163995885,0,0.485300549842228,0.441683036920787,0.484875253135222,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,7.84163101647435,23.5129174453076,109.681677160215,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0.657587197282725,0,1.0447564995665,0.411564272815887,4.57778813682534,0,0,0,0,0,0.180062061461015,0,0,0,0.232533944750408,0.268273401399619,0,0,0,0,0.146199987425332,0,0,0,0,0,0.264450566663544,8.53153002140936,2.55460339046482,1.80414445850931,0.80673409849337,1.77902435075896,1.90225626112559,2.37264530772256,1.97638745668813,4.77536896720512,0.596869416123452,1.36474860983384,0.898819408654221,1.94524244887225,1.99141273254367,10.4317345524195,15.6520462275328,13.5249282807697,15.8848035719345,18.4254862809244,12.4841759404767,16.6312092636797,12.5468625782662,14.2868842335651,9.00799296629144,0,0,0.393117990226406,0,0,0.241177159752417,0,0,0,0,0,0,0,0.252578877947112,0,0,0.369506380333209,1.32643988239339,0.488894929326078,1.69745085775188,0.234690248288502,0.837531287209079,0.238043640886014,0.585400943573396,0.630540576424764,0.664394068946325,0.637819074629948,0.655453258862952,0.345369963731791,0.723245292907558,0,0,0,0.275936746304732,5.29816946959713,2.93029216480508,0,0.504941854408746,5.36363973007636,5.46614242015294,7.97066571611356,0,0,0.849229592366497,2.83367491172426,2.04579100537918,1.18586333383957,0,3.12268187458191,6.23229612835393,2.11753047159649,9.40329700943452,0,2.18502572539483,0.302323556964751,0.754420319023592,1.77181135728464,1.84461088766356,1.55056975900933,0.727067458955011,0.356497378384721,1.58018378967908,1.05418608574999,1.03135543248187,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0.704015124191131,0.42366414172764,0.661585194164886,3.2977250588296,0.968786560175433,3.98065304525829,4.53614907211919,4.59594519286172,1.7488850197791,11.8672193286726,0.683483523191411,2.27025554759545,0.740778109478847,0.376736914009382,0.410082683163076,0.228778173206523,0,0,0,0,3.95419991976419,3.25311147402958,3.45617090629764,2.92723614420256,2.62035076495413,1.61837215661785,1.32245529160537,1.57053565190418,3.36998930558661,0,0,0.448549638131936,1.32366792365678,0,0.645799117388655,0.168956125490778,0.234714477291508,3.51551839078665,0.104859344425711,0.241584120826006,2.30424005006292,0,0.405450430580328,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,2.70465431645067,7.3196165425961,12.454310450174,7.28852488868824,8.02515366456581,0,0,0,0,0,0,0,0,0,0,3.1136204275253,1.59609949360412,3.75613932659095,2.43106717068294,1.25767897576789,1.65459157605013,2.00022055021454,3.09052585858341,1.28367683836726,1.51618327058278,2.5347929989024,1.69763707247469,2.62196220915671,1.60062881012173,1.89537047553524,0.952587382566147,1.39061191133827,1.73618298417335,1.64834360321323,2.20798380201596,1.02860775715625,2.66213709239006,2.38436189947321,2.18019624948493,1.59985946706062,1.4384483341585,1.64635175585495,0.526139422875686,2.03706170768793,0.561142271657738,1.66089025373844,1.18205378850676,2.45538625901814,1.08455788830176,1.92906610981141,0.249810577937946,1.16965804222704,0.859484216193193,1.53030665655075,1.10295709559758,1.39120701372253 | |||
|short_description=p1@Hoxb7 | |||
}} |
Revision as of 10:25, 4 August 2015
Short description: | p1@Hoxb7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Hoxb7_5end |
Coexpression cluster: | MCL_coexpression_mm9:1601 |
Association with transcript: | 0bp_to_NM_010460, uc007lbr.1_5end |
EntrezGene: | 15415 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cavitated compound organ | 8.41e-19 | 21 |
kidney | 8.46e-13 | 14 |
kidney mesenchyme | 8.46e-13 | 14 |
upper urinary tract | 8.46e-13 | 14 |
kidney rudiment | 8.46e-13 | 14 |
kidney field | 8.46e-13 | 14 |
renal system | 1.29e-10 | 19 |
intermediate mesoderm | 3.29e-10 | 14 |
urinary system structure | 5.84e-10 | 18 |
adrenal gland | 4.04e-07 | 7 |
adrenal/interrenal gland | 4.04e-07 | 7 |
spinal cord | 6.23e-07 | 6 |
dorsal region element | 6.23e-07 | 6 |
dorsum | 6.23e-07 | 6 |