FFCP PHASE1:Mm9::chr5:44259771..44259785,+: Difference between revisions
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{{FFCP|EntrezGene=12494|HGNC=|MCL_coexpression_id=18|UniProt=P56528|association_with_transcript=-262bp_to_ENSMUST00000030964_5end|description=CAGE_peak_3_at_Cd38_5end|id=chr5:44259771..44259785,+|ontology_enrichment_celltype=CL:0000553!1.95e-12!6;CL:0000556!1.95e-12!6;CL:0000050!5.85e-08!9|ontology_enrichment_celltype_v019_2=CL:0000553,4.26e-24,6;CL:0000556,4.26e-24,6;CL:0000050,3.24e-16,9;CL:0000839,2.42e-11,13;CL:0000945,3.74e-10,1;CL:0000236,3.74e-10,1;CL:0000826,3.74e-10,1;CL:0000763,2.83e-09,16;CL:0002031,5.18e-09,25;CL:0000049,7.43e-08,19;CL:0000988,4.79e-07,32;CL:0002032,4.79e-07,32;CL:0000037,4.79e-07,32;CL:0000837,4.79e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003887!1.57e-08!10;UBERON:0005409!4.20e-08!59;UBERON:0004923!9.52e-08!24|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.66e-13,6;UBERON:0004457,1.66e-13,6;UBERON:0000042,1.66e-13,6;UBERON:0004854,1.66e-13,6;UBERON:0009034,1.66e-13,6;UBERON:0002095,1.66e-13,6;UBERON:0004782,1.66e-13,6;UBERON:0003281,1.66e-13,6;UBERON:0009664,1.66e-13,6;UBERON:0002296,1.66e-13,6;UBERON:0005602,1.66e-13,6;UBERON:0001179,1.66e-13,6;UBERON:0006293,1.66e-13,6;UBERON:0002193,2.37e-11,48;UBERON:0002405,2.37e-11,48;UBERON:0000029,3.04e-10,1;UBERON:0001097,3.04e-10,1;UBERON:0003968,3.04e-10,1;UBERON:0001467,3.04e-10,1;UBERON:0001153,4.59e-10,1;UBERON:0001045,4.59e-10,1;UBERON:0002390,2.70e-09,45;UBERON:0003061,2.70e-09,45;UBERON:0002371,2.83e-09,16;UBERON:0003887,2.36e-08,10;UBERON:0001474,8.10e-07,22;UBERON:0004765,8.10e-07,22;UBERON:0001434,8.10e-07,22|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,1.61980213911861,0.699561878128147,7.88655413395594,6.30726394586398,5.94145512517242,0,0,0,0,0.45881856213434,0,0,0,0.950117097281869,0,0.443461021310609,0,0,0,0,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02678254538567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.91981978929626,0.148442139064825,0,0,0,0,0,0.125666591329675,0,0.144599356919912,0,0,0.220841518460394,0.969750506270444,3.72783522436244,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0,0.201683524623343,0,0,0,0,0,0,0.38992817423824,0,0.432276099749388,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655453258862952,0.172684981865896,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,2.22132145037209,0,0,0.941842285023455,2.59719032669948,1.83022538565218,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0.777689839750757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p3@Cd38}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12494 | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P56528 | |||
|association_with_transcript=-262bp_to_ENSMUST00000030964_5end | |||
|cluster_id=chr5:44259771..44259785,+ | |||
|description=CAGE_peak_3_at_Cd38_5end | |||
|id=chr5:44259771..44259785,+ | |||
|ontology_enrichment_celltype=CL:0000553!1.95e-12!6;CL:0000556!1.95e-12!6;CL:0000050!5.85e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,4.26e-24,6;CL:0000556,4.26e-24,6;CL:0000050,3.24e-16,9;CL:0000839,2.42e-11,13;CL:0000945,3.74e-10,1;CL:0000236,3.74e-10,1;CL:0000826,3.74e-10,1;CL:0000763,2.83e-09,16;CL:0002031,5.18e-09,25;CL:0000049,7.43e-08,19;CL:0000988,4.79e-07,32;CL:0002032,4.79e-07,32;CL:0000037,4.79e-07,32;CL:0000837,4.79e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003887!1.57e-08!10;UBERON:0005409!4.20e-08!59;UBERON:0004923!9.52e-08!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.66e-13,6;UBERON:0004457,1.66e-13,6;UBERON:0000042,1.66e-13,6;UBERON:0004854,1.66e-13,6;UBERON:0009034,1.66e-13,6;UBERON:0002095,1.66e-13,6;UBERON:0004782,1.66e-13,6;UBERON:0003281,1.66e-13,6;UBERON:0009664,1.66e-13,6;UBERON:0002296,1.66e-13,6;UBERON:0005602,1.66e-13,6;UBERON:0001179,1.66e-13,6;UBERON:0006293,1.66e-13,6;UBERON:0002193,2.37e-11,48;UBERON:0002405,2.37e-11,48;UBERON:0000029,3.04e-10,1;UBERON:0001097,3.04e-10,1;UBERON:0003968,3.04e-10,1;UBERON:0001467,3.04e-10,1;UBERON:0001153,4.59e-10,1;UBERON:0001045,4.59e-10,1;UBERON:0002390,2.70e-09,45;UBERON:0003061,2.70e-09,45;UBERON:0002371,2.83e-09,16;UBERON:0003887,2.36e-08,10;UBERON:0001474,8.10e-07,22;UBERON:0004765,8.10e-07,22;UBERON:0001434,8.10e-07,22 | |||
|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,1.61980213911861,0.699561878128147,7.88655413395594,6.30726394586398,5.94145512517242,0,0,0,0,0.45881856213434,0,0,0,0.950117097281869,0,0.443461021310609,0,0,0,0,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02678254538567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.91981978929626,0.148442139064825,0,0,0,0,0,0.125666591329675,0,0.144599356919912,0,0,0.220841518460394,0.969750506270444,3.72783522436244,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0,0.201683524623343,0,0,0,0,0,0,0.38992817423824,0,0.432276099749388,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655453258862952,0.172684981865896,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,2.22132145037209,0,0,0.941842285023455,2.59719032669948,1.83022538565218,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0.777689839750757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p3@Cd38 | |||
}} |
Revision as of 10:15, 4 August 2015
Short description: | p3@Cd38 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cd38_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | -262bp_to_ENSMUST00000030964_5end |
EntrezGene: | 12494 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 4.26e-24 | 6 |
megakaryocyte | 4.26e-24 | 6 |
megakaryocyte-erythroid progenitor cell | 3.24e-16 | 9 |
myeloid lineage restricted progenitor cell | 2.42e-11 | 13 |
lymphocyte of B lineage | 3.74e-10 | 1 |
B cell | 3.74e-10 | 1 |
pro-B cell | 3.74e-10 | 1 |
myeloid cell | 2.83e-09 | 16 |
hematopoietic lineage restricted progenitor cell | 5.18e-09 | 25 |
common myeloid progenitor | 7.43e-08 | 19 |
hematopoietic cell | 4.79e-07 | 32 |
hematopoietic oligopotent progenitor cell | 4.79e-07 | 32 |
hematopoietic stem cell | 4.79e-07 | 32 |
hematopoietic multipotent progenitor cell | 4.79e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.66e-13 | 6 |
cavity lining | 1.66e-13 | 6 |
serous membrane | 1.66e-13 | 6 |
gastrointestinal system mesentery | 1.66e-13 | 6 |
stomach region | 1.66e-13 | 6 |
mesentery | 1.66e-13 | 6 |
gastrointestinal system serosa | 1.66e-13 | 6 |
mesentery of stomach | 1.66e-13 | 6 |
gut mesentery | 1.66e-13 | 6 |
dorsal mesentery | 1.66e-13 | 6 |
dorsal mesogastrium | 1.66e-13 | 6 |
peritoneal cavity | 1.66e-13 | 6 |
spleen primordium | 1.66e-13 | 6 |
hemolymphoid system | 2.37e-11 | 48 |
immune system | 2.37e-11 | 48 |
lymph node | 3.04e-10 | 1 |
axillary lymph node | 3.04e-10 | 1 |
peripheral lymph node | 3.04e-10 | 1 |
shoulder | 3.04e-10 | 1 |
caecum | 4.59e-10 | 1 |
midgut | 4.59e-10 | 1 |
hematopoietic system | 2.70e-09 | 45 |
blood island | 2.70e-09 | 45 |
bone marrow | 2.83e-09 | 16 |
intraembryonic coelom | 2.36e-08 | 10 |
bone element | 8.10e-07 | 22 |
skeletal element | 8.10e-07 | 22 |
skeletal system | 8.10e-07 | 22 |