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FFCP PHASE1:Mm9::chr5:34892217..34892230,+: Difference between revisions

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{{FFCP|EntrezGene=24055|HGNC=|MCL_coexpression_id=22|UniProt=E9QJU7,Q5U3L0|association_with_transcript=0bp_to_ENSMUST00000118545,NM_001145859,uc008xco.2_5end|description=CAGE_peak_4_at_Sh3bp2_5end|id=chr5:34892217..34892230,+|ontology_enrichment_celltype=CL:0000540!2.95e-09!33;CL:0000047!2.95e-09!33;CL:0000031!2.95e-09!33;CL:0000404!2.95e-09!33;CL:0000393!2.54e-08!39;CL:0000211!2.54e-08!39;CL:0000117!3.20e-08!23;CL:0000337!3.20e-08!23;CL:0002319!2.65e-07!43;CL:0000221!3.26e-07!44;CL:0000133!3.26e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,9.17e-28,23;CL:0000337,9.17e-28,23;CL:0002609,1.30e-24,6;CL:0000540,1.21e-18,33;CL:0000047,1.21e-18,33;CL:0000031,1.21e-18,33;CL:0000404,1.21e-18,33;CL:0000393,2.07e-15,39;CL:0000211,2.07e-15,39;CL:0002319,9.34e-14,43;CL:0002608,1.98e-13,3;CL:0000221,2.17e-13,44;CL:0000133,2.17e-13,44;CL:0000120,5.46e-13,3;CL:0002321,1.57e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.55e-15,34;UBERON:0003528,1.87e-12,29;UBERON:0002791,1.87e-12,29;UBERON:0001893,1.87e-12,29;UBERON:0001017,8.02e-10,73;UBERON:0001954,8.92e-10,7;UBERON:0003022,8.92e-10,7;UBERON:0002421,8.92e-10,7;UBERON:0000349,8.92e-10,7;UBERON:0002600,8.92e-10,7;UBERON:0001016,1.74e-09,75;UBERON:0001049,4.16e-09,52;UBERON:0005068,4.16e-09,52;UBERON:0006241,4.16e-09,52;UBERON:0007135,4.16e-09,52;UBERON:0000956,7.57e-09,21;UBERON:0001869,7.57e-09,21;UBERON:0000203,7.57e-09,21;UBERON:0002780,7.90e-09,39;UBERON:0001890,7.90e-09,39;UBERON:0006240,7.90e-09,39;UBERON:0000073,1.09e-08,54;UBERON:0003080,1.45e-08,40;UBERON:0000369,1.14e-07,5;UBERON:0002435,1.14e-07,5;UBERON:0000204,1.14e-07,5;UBERON:0010082,1.14e-07,5;UBERON:0002616,3.14e-07,46;UBERON:0000955,4.85e-07,47;UBERON:0006238,4.85e-07,47;UBERON:0002346,5.35e-07,64;UBERON:0003075,5.35e-07,64;UBERON:0007284,5.35e-07,64;UBERON:0004121,6.70e-07,95;UBERON:0000924,6.70e-07,95;UBERON:0006601,6.70e-07,95|phase1_expression=0.320297694209588,0.348975407639361,0,0,0,0.16787927191189,0.233612640595526,0,0.703943610758334,0.70219357896598,0,0.159544317990673,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0.782391344348039,0.436050312760893,0.659058548203415,0,0,0,0,0,0,0.514518872071894,0.286533439938757,0,3.23706337375356,3.70293685490423,3.1691570175309,0,0,0,0,0,0.299600110518405,0,4.14758449233911,2.56511282830212,3.15487442027073,0.856952953211411,0.441737081903227,3.55223317723367,4.40889166683887,5.51531271966013,0,0.127687338085188,0,1.45074916503213,3.93396867490361,0.52091337055676,0,0.56276261003168,0,0.294628585473668,1.56608848879013,2.79599168737951,0,0,0,0,0,0,0,0,0.140444420131752,0,0.519572009205738,0,0.14084341977668,0,0,0,0.216491041011214,0,0.505524445014783,0.22836775943812,0.258937883647172,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0.161766849947409,0,0,0,0,0.209446706813455,0,0.11981512450592,0,0.127070227073065,0.149790639404823,0,2.51308704225729,0,0,0,0.162241263067758,0,0.124406970610093,0,0,0.520481771850815,0.459804208866946,0.360124259610698,0.30140963567143,0.476255494059295,0,0.374806898238915,0,0.862271971731369,1.32374256117473,0.879755620819744,0.219195732427575,0,0.348252166522167,0.411564272815887,0.398068533636986,0,0.257347907114715,0,0.207125772535502,0.234526059981096,0.36012412292203,0.473489471170421,0,0.154267112887378,0,0,0,0,0.164167464079095,0,0,0.439100230582101,0,0,2.57261530948211,0,0.264450566663544,0,1.39342003116263,0.257734922644187,0.403367049246685,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0,0.38992817423824,0.898819408654221,0,0.199141273254367,0.758671603812327,0.342745537829186,0,0,0,0.0701358198903186,0.316182685621286,0,0,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0.287696137450811,0,0,0,0.372140947668503,0,0,0,0,0,0.189491411770485,0.488894929326078,0.169745085775188,0.469380496577004,0,0,0.195133647857799,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0.390438744296638,0.215423397732799,0.477937595905104,0,0.566153061577665,0.404810701674894,0.584511715822624,0.790575555893047,0,0.283880170416537,0.534196811001766,0.162886959353576,0.494910368917606,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0.922305443831782,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0.517434735131018,0,0.709360934569094,0.178368817602071,0.329098041204242,0.304464949114599,0.704015124191131,0,0.220528398054962,0.16488625294148,0.322928853391811,0.301564624640779,0.477489376012546,0.328281799490123,0.291480836629851,0,0,0.412773735926445,0,0,0,0,0.169978429993855,0.419854356970974,0.138199973804424,0,1.10717597753397,0.203319467126849,0.108005340821801,0,0.218362563746178,0.269728692769641,0,0,0.259229946583586,0,0,0.598066184175915,0,0,0.258319646955462,0,0.234714477291508,0,0.104859344425711,0,0,0,0.405450430580328,0,0.129920822977795,0,0.198681354781265,0.240390899039938,0,0.605798699688886,0.304827226619999,0.201652370273681,0.0974578807397524,0.384847366561318,0.116876902181569,0,0,0,0,0.19318959403219,0,0.36630324853453,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.62272408550506,1.19707462020309,0.170733605754134,0.486213434136588,0.628839487883947,1.10306105070008,0.222246727801615,0.412070114477788,1.28367683836726,0.252697211763798,0.760437899670719,0.565879024158229,0.280924522409647,0.192075457214608,0.574354689556133,0.952587382566147,0.695305955669133,0.38581844092741,0.824171801606613,0.883193520806384,1.37147700954166,0.532427418478012,0.238436189947321,0.145346416632329,0.282328141245992,0.25384382367503,0.914639864363863,0.263069711437843,0.135804113845862,0,0.237270036248348,0.492522411877817,0.818462086339379,0,0.385813221962283,1.99848462350357,0.233931608445408,0.214871054048298,0.57386499620653,0,0.463735671240843|short_description=p4@Sh3bp2}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:24055
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=uniprot:E9QJU7,uniprot:Q5U3L0
|association_with_transcript=0bp_to_ENSMUST00000118545,NM_001145859,uc008xco.2_5end
|cluster_id=chr5:34892217..34892230,+
|description=CAGE_peak_4_at_Sh3bp2_5end
|id=chr5:34892217..34892230,+
|ontology_enrichment_celltype=CL:0000540!2.95e-09!33;CL:0000047!2.95e-09!33;CL:0000031!2.95e-09!33;CL:0000404!2.95e-09!33;CL:0000393!2.54e-08!39;CL:0000211!2.54e-08!39;CL:0000117!3.20e-08!23;CL:0000337!3.20e-08!23;CL:0002319!2.65e-07!43;CL:0000221!3.26e-07!44;CL:0000133!3.26e-07!44
|ontology_enrichment_celltype_v019_2=CL:0000117,9.17e-28,23;CL:0000337,9.17e-28,23;CL:0002609,1.30e-24,6;CL:0000540,1.21e-18,33;CL:0000047,1.21e-18,33;CL:0000031,1.21e-18,33;CL:0000404,1.21e-18,33;CL:0000393,2.07e-15,39;CL:0000211,2.07e-15,39;CL:0002319,9.34e-14,43;CL:0002608,1.98e-13,3;CL:0000221,2.17e-13,44;CL:0000133,2.17e-13,44;CL:0000120,5.46e-13,3;CL:0002321,1.57e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.55e-15,34;UBERON:0003528,1.87e-12,29;UBERON:0002791,1.87e-12,29;UBERON:0001893,1.87e-12,29;UBERON:0001017,8.02e-10,73;UBERON:0001954,8.92e-10,7;UBERON:0003022,8.92e-10,7;UBERON:0002421,8.92e-10,7;UBERON:0000349,8.92e-10,7;UBERON:0002600,8.92e-10,7;UBERON:0001016,1.74e-09,75;UBERON:0001049,4.16e-09,52;UBERON:0005068,4.16e-09,52;UBERON:0006241,4.16e-09,52;UBERON:0007135,4.16e-09,52;UBERON:0000956,7.57e-09,21;UBERON:0001869,7.57e-09,21;UBERON:0000203,7.57e-09,21;UBERON:0002780,7.90e-09,39;UBERON:0001890,7.90e-09,39;UBERON:0006240,7.90e-09,39;UBERON:0000073,1.09e-08,54;UBERON:0003080,1.45e-08,40;UBERON:0000369,1.14e-07,5;UBERON:0002435,1.14e-07,5;UBERON:0000204,1.14e-07,5;UBERON:0010082,1.14e-07,5;UBERON:0002616,3.14e-07,46;UBERON:0000955,4.85e-07,47;UBERON:0006238,4.85e-07,47;UBERON:0002346,5.35e-07,64;UBERON:0003075,5.35e-07,64;UBERON:0007284,5.35e-07,64;UBERON:0004121,6.70e-07,95;UBERON:0000924,6.70e-07,95;UBERON:0006601,6.70e-07,95
|phase1_expression=0.320297694209588,0.348975407639361,0,0,0,0.16787927191189,0.233612640595526,0,0.703943610758334,0.70219357896598,0,0.159544317990673,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0.782391344348039,0.436050312760893,0.659058548203415,0,0,0,0,0,0,0.514518872071894,0.286533439938757,0,3.23706337375356,3.70293685490423,3.1691570175309,0,0,0,0,0,0.299600110518405,0,4.14758449233911,2.56511282830212,3.15487442027073,0.856952953211411,0.441737081903227,3.55223317723367,4.40889166683887,5.51531271966013,0,0.127687338085188,0,1.45074916503213,3.93396867490361,0.52091337055676,0,0.56276261003168,0,0.294628585473668,1.56608848879013,2.79599168737951,0,0,0,0,0,0,0,0,0.140444420131752,0,0.519572009205738,0,0.14084341977668,0,0,0,0.216491041011214,0,0.505524445014783,0.22836775943812,0.258937883647172,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0.161766849947409,0,0,0,0,0.209446706813455,0,0.11981512450592,0,0.127070227073065,0.149790639404823,0,2.51308704225729,0,0,0,0.162241263067758,0,0.124406970610093,0,0,0.520481771850815,0.459804208866946,0.360124259610698,0.30140963567143,0.476255494059295,0,0.374806898238915,0,0.862271971731369,1.32374256117473,0.879755620819744,0.219195732427575,0,0.348252166522167,0.411564272815887,0.398068533636986,0,0.257347907114715,0,0.207125772535502,0.234526059981096,0.36012412292203,0.473489471170421,0,0.154267112887378,0,0,0,0,0.164167464079095,0,0,0.439100230582101,0,0,2.57261530948211,0,0.264450566663544,0,1.39342003116263,0.257734922644187,0.403367049246685,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0,0.38992817423824,0.898819408654221,0,0.199141273254367,0.758671603812327,0.342745537829186,0,0,0,0.0701358198903186,0.316182685621286,0,0,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0.287696137450811,0,0,0,0.372140947668503,0,0,0,0,0,0.189491411770485,0.488894929326078,0.169745085775188,0.469380496577004,0,0,0.195133647857799,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0.390438744296638,0.215423397732799,0.477937595905104,0,0.566153061577665,0.404810701674894,0.584511715822624,0.790575555893047,0,0.283880170416537,0.534196811001766,0.162886959353576,0.494910368917606,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0.922305443831782,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0.517434735131018,0,0.709360934569094,0.178368817602071,0.329098041204242,0.304464949114599,0.704015124191131,0,0.220528398054962,0.16488625294148,0.322928853391811,0.301564624640779,0.477489376012546,0.328281799490123,0.291480836629851,0,0,0.412773735926445,0,0,0,0,0.169978429993855,0.419854356970974,0.138199973804424,0,1.10717597753397,0.203319467126849,0.108005340821801,0,0.218362563746178,0.269728692769641,0,0,0.259229946583586,0,0,0.598066184175915,0,0,0.258319646955462,0,0.234714477291508,0,0.104859344425711,0,0,0,0.405450430580328,0,0.129920822977795,0,0.198681354781265,0.240390899039938,0,0.605798699688886,0.304827226619999,0.201652370273681,0.0974578807397524,0.384847366561318,0.116876902181569,0,0,0,0,0.19318959403219,0,0.36630324853453,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.62272408550506,1.19707462020309,0.170733605754134,0.486213434136588,0.628839487883947,1.10306105070008,0.222246727801615,0.412070114477788,1.28367683836726,0.252697211763798,0.760437899670719,0.565879024158229,0.280924522409647,0.192075457214608,0.574354689556133,0.952587382566147,0.695305955669133,0.38581844092741,0.824171801606613,0.883193520806384,1.37147700954166,0.532427418478012,0.238436189947321,0.145346416632329,0.282328141245992,0.25384382367503,0.914639864363863,0.263069711437843,0.135804113845862,0,0.237270036248348,0.492522411877817,0.818462086339379,0,0.385813221962283,1.99848462350357,0.233931608445408,0.214871054048298,0.57386499620653,0,0.463735671240843
|short_description=p4@Sh3bp2
}}

Revision as of 08:29, 4 August 2015

Short description:p4@Sh3bp2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Sh3bp2_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: 0bp_to_ENSMUST00000118545, NM_001145859, uc008xco.2_5end
EntrezGene:24055
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p4@Sh3bp2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.24
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.15
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.57
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.55
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.41
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.93
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.80
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F12.51
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G12.57
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter4.55e-1534
brain grey matter1.87e-1229
regional part of telencephalon1.87e-1229
telencephalon1.87e-1229
central nervous system8.02e-1073
Ammon's horn8.92e-107
lobe parts of cerebral cortex8.92e-107
hippocampal formation8.92e-107
limbic system8.92e-107
limbic lobe8.92e-107
nervous system1.74e-0975
neural tube4.16e-0952
neural rod4.16e-0952
future spinal cord4.16e-0952
neural keel4.16e-0952
cerebral cortex7.57e-0921
cerebral hemisphere7.57e-0921
pallium7.57e-0921
regional part of forebrain7.90e-0939
forebrain7.90e-0939
future forebrain7.90e-0939
regional part of nervous system1.09e-0854
anterior neural tube1.45e-0840
corpus striatum1.14e-075
striatum1.14e-075
ventral part of telencephalon1.14e-075
future corpus striatum1.14e-075
regional part of brain3.14e-0746
brain4.85e-0747
future brain4.85e-0747
neurectoderm5.35e-0764
neural plate5.35e-0764
presumptive neural plate5.35e-0764
ectoderm-derived structure6.70e-0795
ectoderm6.70e-0795
presumptive ectoderm6.70e-0795
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