FFCP PHASE1:Mm9::chr16:9995505..9995536,-: Difference between revisions
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{{FFCP|EntrezGene=14811|HGNC=|MCL_coexpression_id=2|UniProt=P35436|association_with_transcript=-491bp_to_ENSMUST00000115835_5end|description=CAGE_peak_6_at_Grin2a_5end|id=chr16:9995505..9995536,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000117,2.03e-08,23;CL:0000337,2.03e-08,23;CL:0002614,1.62e-07,3;CL:0002610,2.23e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.84e-19!52;UBERON:0005068!2.84e-19!52;UBERON:0006241!2.84e-19!52;UBERON:0007135!2.84e-19!52;UBERON:0000955!7.66e-18!50;UBERON:0006238!7.66e-18!50;UBERON:0002616!5.20e-17!49;UBERON:0000033!3.49e-16!63;UBERON:0001017!3.98e-16!73;UBERON:0005743!3.98e-16!73;UBERON:0002346!1.02e-15!71;UBERON:0003075!1.02e-15!71;UBERON:0007284!1.02e-15!71;UBERON:0000073!3.20e-15!75;UBERON:0001016!3.20e-15!75;UBERON:0003080!2.88e-13!40;UBERON:0002020!5.76e-13!34;UBERON:0003056!1.22e-12!49;UBERON:0002780!1.49e-12!39;UBERON:0001890!1.49e-12!39;UBERON:0006240!1.49e-12!39;UBERON:0004121!1.95e-11!102;UBERON:0000924!1.95e-11!102;UBERON:0006601!1.95e-11!102;UBERON:0002021!9.85e-11!10;UBERON:0000411!9.85e-11!10;UBERON:0001950!9.85e-11!10;UBERON:0002791!1.74e-09!29;UBERON:0003528!1.74e-09!29;UBERON:0001893!1.74e-09!29;UBERON:0007811!9.37e-09!86;UBERON:0000153!1.03e-08!94;UBERON:0000025!1.79e-08!114;UBERON:0004111!5.37e-08!122;UBERON:0002619!2.88e-07!17;UBERON:0003076!6.08e-07!12;UBERON:0003057!6.08e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.06e-33,54;UBERON:0001049,3.57e-30,52;UBERON:0005068,3.57e-30,52;UBERON:0006241,3.57e-30,52;UBERON:0007135,3.57e-30,52;UBERON:0001017,3.76e-29,73;UBERON:0001016,3.40e-28,75;UBERON:0002021,5.87e-26,10;UBERON:0000411,5.87e-26,10;UBERON:0001950,5.87e-26,10;UBERON:0000955,3.66e-24,47;UBERON:0006238,3.66e-24,47;UBERON:0002020,1.01e-23,34;UBERON:0002346,2.29e-23,64;UBERON:0003075,2.29e-23,64;UBERON:0007284,2.29e-23,64;UBERON:0002616,2.19e-22,46;UBERON:0010371,2.09e-21,73;UBERON:0004121,7.72e-21,95;UBERON:0000924,7.72e-21,95;UBERON:0006601,7.72e-21,95;UBERON:0002619,1.32e-17,17;UBERON:0003528,1.72e-17,29;UBERON:0002791,1.72e-17,29;UBERON:0001893,1.72e-17,29;UBERON:0003080,2.31e-17,40;UBERON:0000956,1.40e-16,21;UBERON:0001869,1.40e-16,21;UBERON:0000203,1.40e-16,21;UBERON:0002780,7.11e-16,39;UBERON:0001890,7.11e-16,39;UBERON:0006240,7.11e-16,39;UBERON:0010314,1.10e-15,92;UBERON:0003076,1.56e-14,12;UBERON:0003057,1.56e-14,12;UBERON:0003056,2.23e-13,49;UBERON:0000025,1.98e-10,114;UBERON:0004111,2.77e-10,122;UBERON:0002240,8.11e-10,6;UBERON:0005174,8.11e-10,6;UBERON:0001137,8.11e-10,6;UBERON:0002950,1.42e-09,4;UBERON:0001891,1.42e-09,4;UBERON:0009616,1.42e-09,4;UBERON:0010286,1.42e-09,4;UBERON:0001948,4.64e-08,5;UBERON:0002315,4.64e-08,5;UBERON:0002038,1.62e-07,3;UBERON:0009663,1.62e-07,3;UBERON:0009661,1.62e-07,3;UBERON:0000125,1.62e-07,3;UBERON:0002308,1.62e-07,3;UBERON:0011216,2.11e-07,194;UBERON:0004684,2.23e-07,3;UBERON:0002275,2.23e-07,3|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304130793658544,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,4.57041575046086,3.3130281142742,0,0,0,1.10115880999389,3.70293280447044,1.22885226604995,0.659431438650969,0.548925861614458,0,1.11673199600552,1.68828783009504,3.0559649555362,1.47314292736834,2.27794689278565,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0.150722640552623,0,0.251333182659351,0,0,0,0.323533699894818,0,0,0,2.34224637609238,2.09446706813455,0,0,0,0,2.24685959107234,0.915001205637253,0.251308704225729,7.82209440865244,7.41574826257959,3.1168206683934,4.38051410282946,0.305518091550949,0,0,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0,0.2562274405697,0,0.517406741478031,0,0,0.351902248327898,1.31517439456545,0,1.0447564995665,0,0.59710280045548,0,0,0,0,0.234526059981096,0.180062061461015,0.710234206755631,0.196764231747404,0,0.232533944750408,0.268273401399619,0.116765342367169,0,0.164167464079095,0,0,0,0,10.3042074796422,0.92614151141356,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0.704070744865506,0.167506257441816,0,0.390267295715598,0.315270288212382,0,0.318909537314974,0,0,0,0,0,0,0,1.28440471990234,1.87538698547525,0,0,0,0,0,0,0,0,0,0,0,5.46246237917072,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.680879211507576,0.18006109403131,0,0,0.532020700926821,0.713475270408282,0.822745103010605,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0,0,1.11255181206306,0,1.23832120777933,0.555583582109135,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0.897099276263873,0.827292452285488,0.777804753376191,0.129159823477731,0.337912250981556,0.234714477291508,0.13020438484395,0,0,0,0,0,0.205421914329655,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0.643105137237198,0,5.64751842617067,6.90487854760765,5.15605962095457,9.10821866421544,7.53590771747707,5.2877572817279,5.40018000185445,8.10578165803597,7.70342095273148,10.8729665467882,0,0.399024873401031,0.341467211508268,0,0.209613162627982,0.367687016900028,0,0.206035057238894,0,0.758091635291392,0.50695859978048,0,0.561849044819294,0.320125762024346,0.229741875822453,0,0.463537303779422,0.38581844092741,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.376437521661322,0.169229215783353,0,0.263069711437843,0.407412341537585,0,0.237270036248348,0.591026894253381,0.409231043169689,0,0.192906610981141,0.499621155875892,0.233931608445408,0.214871054048298,0.191288332068843,0,0.231867835620421|short_description=p6@Grin2a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14811 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P35436 | |||
|association_with_transcript=-491bp_to_ENSMUST00000115835_5end | |||
|cluster_id=chr16:9995505..9995536,- | |||
|description=CAGE_peak_6_at_Grin2a_5end | |||
|id=chr16:9995505..9995536,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.03e-08,23;CL:0000337,2.03e-08,23;CL:0002614,1.62e-07,3;CL:0002610,2.23e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.84e-19!52;UBERON:0005068!2.84e-19!52;UBERON:0006241!2.84e-19!52;UBERON:0007135!2.84e-19!52;UBERON:0000955!7.66e-18!50;UBERON:0006238!7.66e-18!50;UBERON:0002616!5.20e-17!49;UBERON:0000033!3.49e-16!63;UBERON:0001017!3.98e-16!73;UBERON:0005743!3.98e-16!73;UBERON:0002346!1.02e-15!71;UBERON:0003075!1.02e-15!71;UBERON:0007284!1.02e-15!71;UBERON:0000073!3.20e-15!75;UBERON:0001016!3.20e-15!75;UBERON:0003080!2.88e-13!40;UBERON:0002020!5.76e-13!34;UBERON:0003056!1.22e-12!49;UBERON:0002780!1.49e-12!39;UBERON:0001890!1.49e-12!39;UBERON:0006240!1.49e-12!39;UBERON:0004121!1.95e-11!102;UBERON:0000924!1.95e-11!102;UBERON:0006601!1.95e-11!102;UBERON:0002021!9.85e-11!10;UBERON:0000411!9.85e-11!10;UBERON:0001950!9.85e-11!10;UBERON:0002791!1.74e-09!29;UBERON:0003528!1.74e-09!29;UBERON:0001893!1.74e-09!29;UBERON:0007811!9.37e-09!86;UBERON:0000153!1.03e-08!94;UBERON:0000025!1.79e-08!114;UBERON:0004111!5.37e-08!122;UBERON:0002619!2.88e-07!17;UBERON:0003076!6.08e-07!12;UBERON:0003057!6.08e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.06e-33,54;UBERON:0001049,3.57e-30,52;UBERON:0005068,3.57e-30,52;UBERON:0006241,3.57e-30,52;UBERON:0007135,3.57e-30,52;UBERON:0001017,3.76e-29,73;UBERON:0001016,3.40e-28,75;UBERON:0002021,5.87e-26,10;UBERON:0000411,5.87e-26,10;UBERON:0001950,5.87e-26,10;UBERON:0000955,3.66e-24,47;UBERON:0006238,3.66e-24,47;UBERON:0002020,1.01e-23,34;UBERON:0002346,2.29e-23,64;UBERON:0003075,2.29e-23,64;UBERON:0007284,2.29e-23,64;UBERON:0002616,2.19e-22,46;UBERON:0010371,2.09e-21,73;UBERON:0004121,7.72e-21,95;UBERON:0000924,7.72e-21,95;UBERON:0006601,7.72e-21,95;UBERON:0002619,1.32e-17,17;UBERON:0003528,1.72e-17,29;UBERON:0002791,1.72e-17,29;UBERON:0001893,1.72e-17,29;UBERON:0003080,2.31e-17,40;UBERON:0000956,1.40e-16,21;UBERON:0001869,1.40e-16,21;UBERON:0000203,1.40e-16,21;UBERON:0002780,7.11e-16,39;UBERON:0001890,7.11e-16,39;UBERON:0006240,7.11e-16,39;UBERON:0010314,1.10e-15,92;UBERON:0003076,1.56e-14,12;UBERON:0003057,1.56e-14,12;UBERON:0003056,2.23e-13,49;UBERON:0000025,1.98e-10,114;UBERON:0004111,2.77e-10,122;UBERON:0002240,8.11e-10,6;UBERON:0005174,8.11e-10,6;UBERON:0001137,8.11e-10,6;UBERON:0002950,1.42e-09,4;UBERON:0001891,1.42e-09,4;UBERON:0009616,1.42e-09,4;UBERON:0010286,1.42e-09,4;UBERON:0001948,4.64e-08,5;UBERON:0002315,4.64e-08,5;UBERON:0002038,1.62e-07,3;UBERON:0009663,1.62e-07,3;UBERON:0009661,1.62e-07,3;UBERON:0000125,1.62e-07,3;UBERON:0002308,1.62e-07,3;UBERON:0011216,2.11e-07,194;UBERON:0004684,2.23e-07,3;UBERON:0002275,2.23e-07,3 | |||
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304130793658544,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,4.57041575046086,3.3130281142742,0,0,0,1.10115880999389,3.70293280447044,1.22885226604995,0.659431438650969,0.548925861614458,0,1.11673199600552,1.68828783009504,3.0559649555362,1.47314292736834,2.27794689278565,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0.150722640552623,0,0.251333182659351,0,0,0,0.323533699894818,0,0,0,2.34224637609238,2.09446706813455,0,0,0,0,2.24685959107234,0.915001205637253,0.251308704225729,7.82209440865244,7.41574826257959,3.1168206683934,4.38051410282946,0.305518091550949,0,0,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0,0.2562274405697,0,0.517406741478031,0,0,0.351902248327898,1.31517439456545,0,1.0447564995665,0,0.59710280045548,0,0,0,0,0.234526059981096,0.180062061461015,0.710234206755631,0.196764231747404,0,0.232533944750408,0.268273401399619,0.116765342367169,0,0.164167464079095,0,0,0,0,10.3042074796422,0.92614151141356,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0.704070744865506,0.167506257441816,0,0.390267295715598,0.315270288212382,0,0.318909537314974,0,0,0,0,0,0,0,1.28440471990234,1.87538698547525,0,0,0,0,0,0,0,0,0,0,0,5.46246237917072,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.680879211507576,0.18006109403131,0,0,0.532020700926821,0.713475270408282,0.822745103010605,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0,0,1.11255181206306,0,1.23832120777933,0.555583582109135,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0.897099276263873,0.827292452285488,0.777804753376191,0.129159823477731,0.337912250981556,0.234714477291508,0.13020438484395,0,0,0,0,0,0.205421914329655,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0.643105137237198,0,5.64751842617067,6.90487854760765,5.15605962095457,9.10821866421544,7.53590771747707,5.2877572817279,5.40018000185445,8.10578165803597,7.70342095273148,10.8729665467882,0,0.399024873401031,0.341467211508268,0,0.209613162627982,0.367687016900028,0,0.206035057238894,0,0.758091635291392,0.50695859978048,0,0.561849044819294,0.320125762024346,0.229741875822453,0,0.463537303779422,0.38581844092741,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.376437521661322,0.169229215783353,0,0.263069711437843,0.407412341537585,0,0.237270036248348,0.591026894253381,0.409231043169689,0,0.192906610981141,0.499621155875892,0.233931608445408,0.214871054048298,0.191288332068843,0,0.231867835620421 | |||
|short_description=p6@Grin2a | |||
}} |
Revision as of 07:04, 4 August 2015
Short description: | p6@Grin2a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Grin2a_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | -491bp_to_ENSMUST00000115835_5end |
EntrezGene: | 14811 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.03e-08 | 23 |
neuroblast (sensu Vertebrata) | 2.03e-08 | 23 |
neuron of the substantia nigra | 1.62e-07 | 3 |
raphe nuclei neuron | 2.23e-07 | 3 |