FFCP PHASE1:Mm9::chr10:25798660..25798671,-: Difference between revisions
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{{FFCP|EntrezGene=77220|HGNC=|MCL_coexpression_id=146|UniProt=|association_with_transcript=97bp_to_uc007erx.2_5end|description=CAGE_peak_3_at_Tmem200a_5end|id=chr10:25798660..25798671,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002613,2.84e-14,3;CL:0000117,3.69e-09,23;CL:0000337,3.69e-09,23;CL:0000120,4.48e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.52e-10!71;UBERON:0003075!3.52e-10!71;UBERON:0007284!3.52e-10!71;UBERON:0004121!1.53e-09!102;UBERON:0000924!1.53e-09!102;UBERON:0006601!1.53e-09!102;UBERON:0003056!4.74e-08!49;UBERON:0003080!4.98e-08!40;UBERON:0002780!1.79e-07!39;UBERON:0001890!1.79e-07!39;UBERON:0006240!1.79e-07!39;UBERON:0000073!2.32e-07!75;UBERON:0001016!2.32e-07!75;UBERON:0001049!2.58e-07!52;UBERON:0005068!2.58e-07!52;UBERON:0006241!2.58e-07!52;UBERON:0007135!2.58e-07!52;UBERON:0001017!4.65e-07!73;UBERON:0005743!4.65e-07!73|ontology_enrichment_uberon_v019_2=UBERON:0002369,4.18e-11,7;UBERON:0006858,4.18e-11,7;UBERON:0002420,1.56e-09,8;UBERON:0007245,1.56e-09,8;UBERON:0010009,1.56e-09,8;UBERON:0010011,1.56e-09,8;UBERON:0000454,1.56e-09,8;UBERON:0000369,8.88e-09,5;UBERON:0002435,8.88e-09,5;UBERON:0000204,8.88e-09,5;UBERON:0010082,8.88e-09,5|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,0.404632921719196,1.5869729378161,1.26766280701236,0.338844532069132,2.66788438833342,0,0,0,0,0.384218305321555,0,0,0,0.285650984403804,0.220868540951614,0.367472397644862,0.0958454710182364,0,0,0,0.307213066512487,1.58263545276233,1.37231465403614,1.04182674111352,0.279182999001381,2.25105044012672,0.61119299110724,0,0.142371680799103,1.3047961207771,0.37863096666592,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0.11418387971906,0,9.50029690014878,0.346970653532272,0.913396434936424,0.691846491768175,1.20578112442098,1.29347577849275,2.89033160058254,0,0,0,0,0,0,3.72783522436244,0,0.209446706813455,0,0,0,0,1.3481157546434,0.457500602818626,0.753926112677186,0.869121600961382,0.511430914660661,0.20778804455956,0.648965052271031,0.203678727700633,0.124406970610093,0.252722758433675,0,0,0,0.540186389416048,0.30140963567143,0.476255494059295,0.12811372028485,0.187403449119458,0.517406741478031,0.215567992932842,0.567318240503458,0.351902248327898,0.219195732427575,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.720332286654991,0,0.264450566663544,0.639864751605702,1.62565670302307,0.128867461322093,0.605050573870028,0,0.380451252225118,0.474529061544512,0.164698954724011,0.251335208800269,0.397912944082302,0.38992817423824,0.898819408654221,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0.757965647081939,0.325929952884052,0,0.234690248288502,0,0,0,0.315270288212382,0.44292937929755,0.159454768657487,0.491589944147214,0.518054945597687,0.433947175744535,0,0,0.491764273019036,0.275936746304732,0.321101179975584,0.35163505977661,0.327869890753351,0.252470927204373,0,0,0.215423397732799,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0.395287777946524,0,0.425820255624806,0,0.325773918707152,0.659880491890142,0,0.485561272309963,0.604647113929502,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,0,0.18006109403131,0.388076051348264,0,0.886701168211368,0.713475270408282,1.15184314421485,0.913394847343798,0,0,0,0,0,0.0603129249281559,0,0,0,0,0.341741761595705,0.619160603889667,0,0,0.136694227721025,0,0,0,0,0,1.42351197111511,0.609958401380546,0.216010681643603,0.836353184057875,0.87345025498471,0.134864346384821,1.65306911450672,0.26175594198403,0.129614973291793,0,0,0.598066184175915,0.165458490457098,0,0.258319646955462,0,0,0.13020438484395,0.104859344425711,0.241584120826006,0.288030006257865,0,0.405450430580328,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.386379188064381,0.187682475451182,1.46521299413812,0,0,0.564751842617067,0.920650473014354,0,0.343706364687375,0,0,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0,0.798049746802062,0.682934423016537,0.729320151204882,0.209613162627982,0.367687016900028,0.44449345560323,0.206035057238894,0,0,0.25347929989024,0.565879024158229,0.280924522409647,0.128050304809739,0.114870937911227,0,0.231768651889711,0.192909220463705,0,0.735994600671987,0,0.177475806159338,0.238436189947321,0.145346416632329,0.376437521661322,0.25384382367503,0.182927972872773,0.789209134313529,0.135804113845862,0,0.118635018124174,0.197008964751127,0.409231043169689,0,0.385813221962283,0.249810577937946,0,0.644613162144895,0,0,0|short_description=p3@Tmem200a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:77220 | |||
|HGNC= | |||
|MCL_coexpression_id=146 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=97bp_to_uc007erx.2_5end | |||
|cluster_id=chr10:25798660..25798671,- | |||
|description=CAGE_peak_3_at_Tmem200a_5end | |||
|id=chr10:25798660..25798671,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,2.84e-14,3;CL:0000117,3.69e-09,23;CL:0000337,3.69e-09,23;CL:0000120,4.48e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.52e-10!71;UBERON:0003075!3.52e-10!71;UBERON:0007284!3.52e-10!71;UBERON:0004121!1.53e-09!102;UBERON:0000924!1.53e-09!102;UBERON:0006601!1.53e-09!102;UBERON:0003056!4.74e-08!49;UBERON:0003080!4.98e-08!40;UBERON:0002780!1.79e-07!39;UBERON:0001890!1.79e-07!39;UBERON:0006240!1.79e-07!39;UBERON:0000073!2.32e-07!75;UBERON:0001016!2.32e-07!75;UBERON:0001049!2.58e-07!52;UBERON:0005068!2.58e-07!52;UBERON:0006241!2.58e-07!52;UBERON:0007135!2.58e-07!52;UBERON:0001017!4.65e-07!73;UBERON:0005743!4.65e-07!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,4.18e-11,7;UBERON:0006858,4.18e-11,7;UBERON:0002420,1.56e-09,8;UBERON:0007245,1.56e-09,8;UBERON:0010009,1.56e-09,8;UBERON:0010011,1.56e-09,8;UBERON:0000454,1.56e-09,8;UBERON:0000369,8.88e-09,5;UBERON:0002435,8.88e-09,5;UBERON:0000204,8.88e-09,5;UBERON:0010082,8.88e-09,5 | |||
|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,0.404632921719196,1.5869729378161,1.26766280701236,0.338844532069132,2.66788438833342,0,0,0,0,0.384218305321555,0,0,0,0.285650984403804,0.220868540951614,0.367472397644862,0.0958454710182364,0,0,0,0.307213066512487,1.58263545276233,1.37231465403614,1.04182674111352,0.279182999001381,2.25105044012672,0.61119299110724,0,0.142371680799103,1.3047961207771,0.37863096666592,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0.11418387971906,0,9.50029690014878,0.346970653532272,0.913396434936424,0.691846491768175,1.20578112442098,1.29347577849275,2.89033160058254,0,0,0,0,0,0,3.72783522436244,0,0.209446706813455,0,0,0,0,1.3481157546434,0.457500602818626,0.753926112677186,0.869121600961382,0.511430914660661,0.20778804455956,0.648965052271031,0.203678727700633,0.124406970610093,0.252722758433675,0,0,0,0.540186389416048,0.30140963567143,0.476255494059295,0.12811372028485,0.187403449119458,0.517406741478031,0.215567992932842,0.567318240503458,0.351902248327898,0.219195732427575,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.720332286654991,0,0.264450566663544,0.639864751605702,1.62565670302307,0.128867461322093,0.605050573870028,0,0.380451252225118,0.474529061544512,0.164698954724011,0.251335208800269,0.397912944082302,0.38992817423824,0.898819408654221,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0.757965647081939,0.325929952884052,0,0.234690248288502,0,0,0,0.315270288212382,0.44292937929755,0.159454768657487,0.491589944147214,0.518054945597687,0.433947175744535,0,0,0.491764273019036,0.275936746304732,0.321101179975584,0.35163505977661,0.327869890753351,0.252470927204373,0,0,0.215423397732799,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0.395287777946524,0,0.425820255624806,0,0.325773918707152,0.659880491890142,0,0.485561272309963,0.604647113929502,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,0,0.18006109403131,0.388076051348264,0,0.886701168211368,0.713475270408282,1.15184314421485,0.913394847343798,0,0,0,0,0,0.0603129249281559,0,0,0,0,0.341741761595705,0.619160603889667,0,0,0.136694227721025,0,0,0,0,0,1.42351197111511,0.609958401380546,0.216010681643603,0.836353184057875,0.87345025498471,0.134864346384821,1.65306911450672,0.26175594198403,0.129614973291793,0,0,0.598066184175915,0.165458490457098,0,0.258319646955462,0,0,0.13020438484395,0.104859344425711,0.241584120826006,0.288030006257865,0,0.405450430580328,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.386379188064381,0.187682475451182,1.46521299413812,0,0,0.564751842617067,0.920650473014354,0,0.343706364687375,0,0,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0,0.798049746802062,0.682934423016537,0.729320151204882,0.209613162627982,0.367687016900028,0.44449345560323,0.206035057238894,0,0,0.25347929989024,0.565879024158229,0.280924522409647,0.128050304809739,0.114870937911227,0,0.231768651889711,0.192909220463705,0,0.735994600671987,0,0.177475806159338,0.238436189947321,0.145346416632329,0.376437521661322,0.25384382367503,0.182927972872773,0.789209134313529,0.135804113845862,0,0.118635018124174,0.197008964751127,0.409231043169689,0,0.385813221962283,0.249810577937946,0,0.644613162144895,0,0,0 | |||
|short_description=p3@Tmem200a | |||
}} |
Revision as of 06:54, 4 August 2015
Short description: | p3@Tmem200a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Tmem200a_5end |
Coexpression cluster: | MCL_coexpression_mm9:146 |
Association with transcript: | 97bp_to_uc007erx.2_5end |
EntrezGene: | 77220 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 2.84e-14 | 3 |
CNS neuron (sensu Vertebrata) | 3.69e-09 | 23 |
neuroblast (sensu Vertebrata) | 3.69e-09 | 23 |
granule cell | 4.48e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 4.18e-11 | 7 |
adrenal/interrenal gland | 4.18e-11 | 7 |
basal ganglion | 1.56e-09 | 8 |
nuclear complex of neuraxis | 1.56e-09 | 8 |
aggregate regional part of brain | 1.56e-09 | 8 |
collection of basal ganglia | 1.56e-09 | 8 |
cerebral subcortex | 1.56e-09 | 8 |
corpus striatum | 8.88e-09 | 5 |
striatum | 8.88e-09 | 5 |
ventral part of telencephalon | 8.88e-09 | 5 |
future corpus striatum | 8.88e-09 | 5 |