FFCP PHASE1:Mm9::chr19:47098414..47098424,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=224|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:47098414..47098424,+|id=chr19:47098414..47098424,+|ontology_enrichment_celltype=CL:0000117!2.27e-26!23;CL:0000337!2.27e-26!23;CL:0000540!2.78e-20!33;CL:0000047!2.78e-20!33;CL:0000031!2.78e-20!33;CL:0000404!2.78e-20!33;CL:0000393!1.09e-15!39;CL:0000211!1.09e-15!39;CL:0002319!2.64e-14!43;CL:0000221!9.14e-14!44;CL:0000133!9.14e-14!44;CL:0000055!5.12e-11!50;CL:0002609!1.41e-07!6|ontology_enrichment_celltype_v019_2=CL:0000117,1.06e-55,23;CL:0000337,1.06e-55,23;CL:0000540,1.62e-37,33;CL:0000047,1.62e-37,33;CL:0000031,1.62e-37,33;CL:0000404,1.62e-37,33;CL:0000393,4.47e-31,39;CL:0000211,4.47e-31,39;CL:0002319,8.86e-28,43;CL:0000221,4.77e-27,44;CL:0000133,4.77e-27,44;CL:0002321,2.30e-15,70;CL:0002609,1.94e-12,6;CL:0000120,7.13e-11,3;CL:0000723,8.48e-11,91;CL:0000048,8.48e-11,91;CL:0002613,1.96e-10,3;CL:0002612,3.01e-10,3;CL:0000034,7.41e-10,97;CL:0002610,9.17e-10,3;CL:0002608,1.48e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.01e-24!73;UBERON:0005743!3.01e-24!73;UBERON:0000073!3.65e-24!75;UBERON:0001016!3.65e-24!75;UBERON:0002346!5.22e-22!71;UBERON:0003075!5.22e-22!71;UBERON:0007284!5.22e-22!71;UBERON:0001049!1.25e-21!52;UBERON:0005068!1.25e-21!52;UBERON:0006241!1.25e-21!52;UBERON:0007135!1.25e-21!52;UBERON:0004121!3.79e-21!102;UBERON:0000924!3.79e-21!102;UBERON:0006601!3.79e-21!102;UBERON:0002020!1.17e-20!34;UBERON:0000033!7.33e-20!63;UBERON:0000955!1.19e-19!50;UBERON:0006238!1.19e-19!50;UBERON:0002616!7.44e-19!49;UBERON:0003056!1.31e-16!49;UBERON:0002791!1.42e-15!29;UBERON:0003528!1.42e-15!29;UBERON:0001893!1.42e-15!29;UBERON:0003080!2.85e-14!40;UBERON:0002780!1.50e-13!39;UBERON:0001890!1.50e-13!39;UBERON:0006240!1.50e-13!39;UBERON:0007811!4.64e-11!86;UBERON:0000956!6.59e-10!21;UBERON:0001869!6.59e-10!21;UBERON:0000203!6.59e-10!21;UBERON:0000153!4.31e-09!94;UBERON:0003076!2.40e-08!12;UBERON:0003057!2.40e-08!12;UBERON:0002240!1.27e-07!6;UBERON:0005174!1.27e-07!6;UBERON:0001137!1.27e-07!6;UBERON:0002420!3.57e-07!8;UBERON:0007245!3.57e-07!8;UBERON:0010009!3.57e-07!8;UBERON:0010011!3.57e-07!8;UBERON:0000454!3.57e-07!8;UBERON:0002619!8.55e-07!17;UBERON:0001948!9.64e-07!5;UBERON:0002315!9.64e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.00e-35,34;UBERON:0000073,5.40e-33,54;UBERON:0001017,2.52e-30,73;UBERON:0001016,2.22e-29,75;UBERON:0001049,3.94e-26,52;UBERON:0005068,3.94e-26,52;UBERON:0006241,3.94e-26,52;UBERON:0007135,3.94e-26,52;UBERON:0003528,1.49e-23,29;UBERON:0002791,1.49e-23,29;UBERON:0001893,1.49e-23,29;UBERON:0004121,4.12e-22,95;UBERON:0000924,4.12e-22,95;UBERON:0006601,4.12e-22,95;UBERON:0002346,2.31e-20,64;UBERON:0003075,2.31e-20,64;UBERON:0007284,2.31e-20,64;UBERON:0002616,1.68e-17,46;UBERON:0010371,2.82e-17,73;UBERON:0000955,4.77e-17,47;UBERON:0006238,4.77e-17,47;UBERON:0002780,1.20e-16,39;UBERON:0001890,1.20e-16,39;UBERON:0006240,1.20e-16,39;UBERON:0003080,3.80e-16,40;UBERON:0000956,4.62e-15,21;UBERON:0001869,4.62e-15,21;UBERON:0000203,4.62e-15,21;UBERON:0001948,6.92e-15,5;UBERON:0002315,6.92e-15,5;UBERON:0010314,9.66e-13,92;UBERON:0002619,1.35e-12,17;UBERON:0003056,1.46e-12,49;UBERON:0002240,2.30e-12,6;UBERON:0005174,2.30e-12,6;UBERON:0001137,2.30e-12,6;UBERON:0003076,3.51e-11,12;UBERON:0003057,3.51e-11,12;UBERON:0002257,3.01e-10,3;UBERON:0002021,4.69e-10,10;UBERON:0000411,4.69e-10,10;UBERON:0001950,4.69e-10,10;UBERON:0002420,7.66e-10,8;UBERON:0007245,7.66e-10,8;UBERON:0010009,7.66e-10,8;UBERON:0010011,7.66e-10,8;UBERON:0000454,7.66e-10,8;UBERON:0004684,9.17e-10,3;UBERON:0002275,9.17e-10,3;UBERON:0000025,2.25e-09,114;UBERON:0004111,1.88e-08,122;UBERON:0011216,4.38e-08,194|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.45096213891115,14.2827564403449,5.70448263155561,0,0,0,0,0,0,0,0.725827286159344,2.97013064329719,1.47227472945967,1.14260393761521,1.10434270475807,1.46988959057945,2.01275489138296,2.75765635983006,2.20231761998777,2.42605942361857,2.15049146558741,5.27545150920775,9.97215315266265,2.08365348222704,3.07101298901519,0.56276261003168,1.68078072554491,2.94628585473668,2.56269025438385,3.54158947068071,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0.608930956624282,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,1.46612694769419,0,0,0,0,0.599162557619291,0,0.376963056338593,0.347648640384553,1.02286182932132,0.20778804455956,0.162241263067758,0.101839363850316,0,0,0,0,0.689706313300419,0.900310649026746,0.452114453507145,0.408218994907967,0.384341160854549,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617427674275707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,0.35163505977661,0,0,0,0,0.215423397732799,0,0,0,0,0.876767573733936,0.395287777946524,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,2.76195141904306,1.14579102687879,0.859265911718438,0,0,0,1.35096360967266,3.17199686288943,1.55328093525546,0,0.798049746802062,0.341467211508268,0.486213434136588,0,0,0,0,0.320919209591815,0.758091635291392,0,0.188626341386076,0.37456602987953,0.192075457214608,0.229741875822453,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0.342869252385415,0.532427418478012,0.238436189947321,0.145346416632329,0.470546902076653,0.338458431566706,0.182927972872773,0.526139422875686,0.271608227691724,0,0.355905054372522,0,0.409231043169689,0.154936841185966,0,0.749431733813838,0.233931608445408,0.429742108096597,0.382576664137687,0.220591419119515,0|short_description=p@chr19:47098414..47098424,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=224 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:47098414..47098424,+ | |||
|description=CAGE_peak_at_chr19:47098414..47098424,+ | |||
|id=chr19:47098414..47098424,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.27e-26!23;CL:0000337!2.27e-26!23;CL:0000540!2.78e-20!33;CL:0000047!2.78e-20!33;CL:0000031!2.78e-20!33;CL:0000404!2.78e-20!33;CL:0000393!1.09e-15!39;CL:0000211!1.09e-15!39;CL:0002319!2.64e-14!43;CL:0000221!9.14e-14!44;CL:0000133!9.14e-14!44;CL:0000055!5.12e-11!50;CL:0002609!1.41e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.06e-55,23;CL:0000337,1.06e-55,23;CL:0000540,1.62e-37,33;CL:0000047,1.62e-37,33;CL:0000031,1.62e-37,33;CL:0000404,1.62e-37,33;CL:0000393,4.47e-31,39;CL:0000211,4.47e-31,39;CL:0002319,8.86e-28,43;CL:0000221,4.77e-27,44;CL:0000133,4.77e-27,44;CL:0002321,2.30e-15,70;CL:0002609,1.94e-12,6;CL:0000120,7.13e-11,3;CL:0000723,8.48e-11,91;CL:0000048,8.48e-11,91;CL:0002613,1.96e-10,3;CL:0002612,3.01e-10,3;CL:0000034,7.41e-10,97;CL:0002610,9.17e-10,3;CL:0002608,1.48e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.01e-24!73;UBERON:0005743!3.01e-24!73;UBERON:0000073!3.65e-24!75;UBERON:0001016!3.65e-24!75;UBERON:0002346!5.22e-22!71;UBERON:0003075!5.22e-22!71;UBERON:0007284!5.22e-22!71;UBERON:0001049!1.25e-21!52;UBERON:0005068!1.25e-21!52;UBERON:0006241!1.25e-21!52;UBERON:0007135!1.25e-21!52;UBERON:0004121!3.79e-21!102;UBERON:0000924!3.79e-21!102;UBERON:0006601!3.79e-21!102;UBERON:0002020!1.17e-20!34;UBERON:0000033!7.33e-20!63;UBERON:0000955!1.19e-19!50;UBERON:0006238!1.19e-19!50;UBERON:0002616!7.44e-19!49;UBERON:0003056!1.31e-16!49;UBERON:0002791!1.42e-15!29;UBERON:0003528!1.42e-15!29;UBERON:0001893!1.42e-15!29;UBERON:0003080!2.85e-14!40;UBERON:0002780!1.50e-13!39;UBERON:0001890!1.50e-13!39;UBERON:0006240!1.50e-13!39;UBERON:0007811!4.64e-11!86;UBERON:0000956!6.59e-10!21;UBERON:0001869!6.59e-10!21;UBERON:0000203!6.59e-10!21;UBERON:0000153!4.31e-09!94;UBERON:0003076!2.40e-08!12;UBERON:0003057!2.40e-08!12;UBERON:0002240!1.27e-07!6;UBERON:0005174!1.27e-07!6;UBERON:0001137!1.27e-07!6;UBERON:0002420!3.57e-07!8;UBERON:0007245!3.57e-07!8;UBERON:0010009!3.57e-07!8;UBERON:0010011!3.57e-07!8;UBERON:0000454!3.57e-07!8;UBERON:0002619!8.55e-07!17;UBERON:0001948!9.64e-07!5;UBERON:0002315!9.64e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.00e-35,34;UBERON:0000073,5.40e-33,54;UBERON:0001017,2.52e-30,73;UBERON:0001016,2.22e-29,75;UBERON:0001049,3.94e-26,52;UBERON:0005068,3.94e-26,52;UBERON:0006241,3.94e-26,52;UBERON:0007135,3.94e-26,52;UBERON:0003528,1.49e-23,29;UBERON:0002791,1.49e-23,29;UBERON:0001893,1.49e-23,29;UBERON:0004121,4.12e-22,95;UBERON:0000924,4.12e-22,95;UBERON:0006601,4.12e-22,95;UBERON:0002346,2.31e-20,64;UBERON:0003075,2.31e-20,64;UBERON:0007284,2.31e-20,64;UBERON:0002616,1.68e-17,46;UBERON:0010371,2.82e-17,73;UBERON:0000955,4.77e-17,47;UBERON:0006238,4.77e-17,47;UBERON:0002780,1.20e-16,39;UBERON:0001890,1.20e-16,39;UBERON:0006240,1.20e-16,39;UBERON:0003080,3.80e-16,40;UBERON:0000956,4.62e-15,21;UBERON:0001869,4.62e-15,21;UBERON:0000203,4.62e-15,21;UBERON:0001948,6.92e-15,5;UBERON:0002315,6.92e-15,5;UBERON:0010314,9.66e-13,92;UBERON:0002619,1.35e-12,17;UBERON:0003056,1.46e-12,49;UBERON:0002240,2.30e-12,6;UBERON:0005174,2.30e-12,6;UBERON:0001137,2.30e-12,6;UBERON:0003076,3.51e-11,12;UBERON:0003057,3.51e-11,12;UBERON:0002257,3.01e-10,3;UBERON:0002021,4.69e-10,10;UBERON:0000411,4.69e-10,10;UBERON:0001950,4.69e-10,10;UBERON:0002420,7.66e-10,8;UBERON:0007245,7.66e-10,8;UBERON:0010009,7.66e-10,8;UBERON:0010011,7.66e-10,8;UBERON:0000454,7.66e-10,8;UBERON:0004684,9.17e-10,3;UBERON:0002275,9.17e-10,3;UBERON:0000025,2.25e-09,114;UBERON:0004111,1.88e-08,122;UBERON:0011216,4.38e-08,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.45096213891115,14.2827564403449,5.70448263155561,0,0,0,0,0,0,0,0.725827286159344,2.97013064329719,1.47227472945967,1.14260393761521,1.10434270475807,1.46988959057945,2.01275489138296,2.75765635983006,2.20231761998777,2.42605942361857,2.15049146558741,5.27545150920775,9.97215315266265,2.08365348222704,3.07101298901519,0.56276261003168,1.68078072554491,2.94628585473668,2.56269025438385,3.54158947068071,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0.608930956624282,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,1.46612694769419,0,0,0,0,0.599162557619291,0,0.376963056338593,0.347648640384553,1.02286182932132,0.20778804455956,0.162241263067758,0.101839363850316,0,0,0,0,0.689706313300419,0.900310649026746,0.452114453507145,0.408218994907967,0.384341160854549,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617427674275707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,0.35163505977661,0,0,0,0,0.215423397732799,0,0,0,0,0.876767573733936,0.395287777946524,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,2.76195141904306,1.14579102687879,0.859265911718438,0,0,0,1.35096360967266,3.17199686288943,1.55328093525546,0,0.798049746802062,0.341467211508268,0.486213434136588,0,0,0,0,0.320919209591815,0.758091635291392,0,0.188626341386076,0.37456602987953,0.192075457214608,0.229741875822453,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0.342869252385415,0.532427418478012,0.238436189947321,0.145346416632329,0.470546902076653,0.338458431566706,0.182927972872773,0.526139422875686,0.271608227691724,0,0.355905054372522,0,0.409231043169689,0.154936841185966,0,0.749431733813838,0.233931608445408,0.429742108096597,0.382576664137687,0.220591419119515,0 | |||
|short_description=p@chr19:47098414..47098424,+ | |||
}} |
Latest revision as of 06:16, 4 August 2015
Short description: | p@chr19:47098414..47098424, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:47098414..47098424, + |
Coexpression cluster: | MCL_coexpression_mm9:224 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.06e-55 | 23 |
neuroblast (sensu Vertebrata) | 1.06e-55 | 23 |
neuron | 1.62e-37 | 33 |
neuronal stem cell | 1.62e-37 | 33 |
neuroblast | 1.62e-37 | 33 |
electrically signaling cell | 1.62e-37 | 33 |
electrically responsive cell | 4.47e-31 | 39 |
electrically active cell | 4.47e-31 | 39 |
neural cell | 8.86e-28 | 43 |
ectodermal cell | 4.77e-27 | 44 |
neurectodermal cell | 4.77e-27 | 44 |
embryonic cell | 2.30e-15 | 70 |
neuron of cerebral cortex | 1.94e-12 | 6 |
granule cell | 7.13e-11 | 3 |
somatic stem cell | 8.48e-11 | 91 |
multi fate stem cell | 8.48e-11 | 91 |
striatum neuron | 1.96e-10 | 3 |
neuron of the ventral spinal cord | 3.01e-10 | 3 |
stem cell | 7.41e-10 | 97 |
raphe nuclei neuron | 9.17e-10 | 3 |
hippocampal neuron | 1.48e-09 | 3 |