FFCP PHASE1:Mm9::chr16:92540124..92540127,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=54|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:92540124..92540127,+|id=chr16:92540124..92540127,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,8.68e-10,3;CL:0002202,8.68e-10,3;CL:0000069,8.68e-10,3;CL:0002632,8.68e-10,3;CL:0002368,8.68e-10,3;CL:0000307,8.68e-10,3;CL:0000377,8.68e-10,3;CL:0002250,1.94e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.36e-16!59;UBERON:0000160!4.20e-14!43;UBERON:0004119!6.97e-08!130;UBERON:0000925!6.97e-08!130;UBERON:0006595!6.97e-08!130;UBERON:0001007!9.23e-08!128;UBERON:0001555!9.23e-08!128;UBERON:0007026!9.23e-08!128;UBERON:0004921!2.30e-07!126;UBERON:0004185!2.30e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.43e-17,47;UBERON:0003126,8.68e-10,3;UBERON:0001005,8.68e-10,3;UBERON:0007196,8.68e-10,3;UBERON:0001558,8.68e-10,3;UBERON:0000160,1.51e-09,31;UBERON:0000945,9.91e-09,16;UBERON:0010039,9.91e-09,16;UBERON:0004921,2.93e-08,114;UBERON:0001007,4.90e-08,116;UBERON:0001555,4.90e-08,116;UBERON:0007026,4.90e-08,116;UBERON:0004119,8.04e-08,118;UBERON:0000925,8.04e-08,118;UBERON:0006595,8.04e-08,118|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0.443461021310609,0,0,0,1.1554064790051,2.82598897109437,2.24586291888606,0,0,0,0,0,0,0,0,0,0,0,0,1.55543919259427,0,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09855523508697,0,0,0,2.59789249213457,2.02687892380079,2.52762222507392,0.22836775943812,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,1.86391761218122,0.292780797011547,0.209446706813455,0.510914110417183,0,0,0,0.299581278809645,0.457500602818626,0.125654352112864,0,0,0.20778804455956,0.324482526135515,0,0,0.758168275301024,0,0,0,0,0.30140963567143,0.340182495756639,0.2562274405697,0.468508622798644,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0.233530684734339,0,0.164167464079095,0,0,0,0,0.420579897128254,0.617427674275707,0,0.264450566663544,0.639864751605702,1.16118335930219,0.515469845288373,0.605050573870028,0.889512175379481,2.47293313946327,0.474529061544512,5.10566759644434,6.28338022000674,1.98956472041151,3.31438948102504,0.898819408654221,1.08069024937347,0.995706366271836,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0,0.189709611372772,0.442830443938806,0.31399745568275,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,1.01847051465113,0.938760993154008,0,0.238043640886014,0.780534591431195,0,0.221464689648775,0,0.491589944147214,0.518054945597687,0.289298117163023,0,0,0.491764273019036,0,0,0,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0.35613120733451,0,0.164970122972535,1.32745138339963,0.485561272309963,1.81394134178851,0.754420319023592,0,0,0.775284879504663,0.363533729477506,1.06949213515416,1.58018378967908,0,1.03135543248187,0,0.18006109403131,0.776152102696527,0,0.177340233642274,0.535106452806212,0,0.304464949114599,0,0.42366414172764,0,0,0,0,0,0.164140899745061,0.874442509889552,0,0,0,0,0,0,0,0,0,0,44.8695190467103,0,0.406638934253697,1.94409613479242,2.09088296014469,3.05707589244649,6.06889558731693,1.90102948168273,23.5580347785627,0.518459893167171,0,1.12738587736838,0,0,0,0.129159823477731,0,0,0.2604087696879,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0.183151624267265,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0.207574695168353,0,0,0,0.209613162627982,0.551530525350042,0,0.206035057238894,0.64183841918363,0,0,0,0.468207537349412,0.256100609619477,0.17230640686684,0,0,0.578727661391115,0,0.294397840268795,0.342869252385415,0.354951612318675,0.238436189947321,0,0.188218760830661,0.0846146078916765,0,0.789209134313529,0.271608227691724,0,0.118635018124174,0,0.409231043169689,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0,0,0|short_description=p@chr16:92540124..92540127,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=54 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:92540124..92540127,+ | |||
|description=CAGE_peak_at_chr16:92540124..92540127,+ | |||
|id=chr16:92540124..92540127,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,8.68e-10,3;CL:0002202,8.68e-10,3;CL:0000069,8.68e-10,3;CL:0002632,8.68e-10,3;CL:0002368,8.68e-10,3;CL:0000307,8.68e-10,3;CL:0000377,8.68e-10,3;CL:0002250,1.94e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.36e-16!59;UBERON:0000160!4.20e-14!43;UBERON:0004119!6.97e-08!130;UBERON:0000925!6.97e-08!130;UBERON:0006595!6.97e-08!130;UBERON:0001007!9.23e-08!128;UBERON:0001555!9.23e-08!128;UBERON:0007026!9.23e-08!128;UBERON:0004921!2.30e-07!126;UBERON:0004185!2.30e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.43e-17,47;UBERON:0003126,8.68e-10,3;UBERON:0001005,8.68e-10,3;UBERON:0007196,8.68e-10,3;UBERON:0001558,8.68e-10,3;UBERON:0000160,1.51e-09,31;UBERON:0000945,9.91e-09,16;UBERON:0010039,9.91e-09,16;UBERON:0004921,2.93e-08,114;UBERON:0001007,4.90e-08,116;UBERON:0001555,4.90e-08,116;UBERON:0007026,4.90e-08,116;UBERON:0004119,8.04e-08,118;UBERON:0000925,8.04e-08,118;UBERON:0006595,8.04e-08,118 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0.443461021310609,0,0,0,1.1554064790051,2.82598897109437,2.24586291888606,0,0,0,0,0,0,0,0,0,0,0,0,1.55543919259427,0,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09855523508697,0,0,0,2.59789249213457,2.02687892380079,2.52762222507392,0.22836775943812,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,1.86391761218122,0.292780797011547,0.209446706813455,0.510914110417183,0,0,0,0.299581278809645,0.457500602818626,0.125654352112864,0,0,0.20778804455956,0.324482526135515,0,0,0.758168275301024,0,0,0,0,0.30140963567143,0.340182495756639,0.2562274405697,0.468508622798644,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0.233530684734339,0,0.164167464079095,0,0,0,0,0.420579897128254,0.617427674275707,0,0.264450566663544,0.639864751605702,1.16118335930219,0.515469845288373,0.605050573870028,0.889512175379481,2.47293313946327,0.474529061544512,5.10566759644434,6.28338022000674,1.98956472041151,3.31438948102504,0.898819408654221,1.08069024937347,0.995706366271836,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0,0.189709611372772,0.442830443938806,0.31399745568275,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,1.01847051465113,0.938760993154008,0,0.238043640886014,0.780534591431195,0,0.221464689648775,0,0.491589944147214,0.518054945597687,0.289298117163023,0,0,0.491764273019036,0,0,0,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0.35613120733451,0,0.164970122972535,1.32745138339963,0.485561272309963,1.81394134178851,0.754420319023592,0,0,0.775284879504663,0.363533729477506,1.06949213515416,1.58018378967908,0,1.03135543248187,0,0.18006109403131,0.776152102696527,0,0.177340233642274,0.535106452806212,0,0.304464949114599,0,0.42366414172764,0,0,0,0,0,0.164140899745061,0.874442509889552,0,0,0,0,0,0,0,0,0,0,44.8695190467103,0,0.406638934253697,1.94409613479242,2.09088296014469,3.05707589244649,6.06889558731693,1.90102948168273,23.5580347785627,0.518459893167171,0,1.12738587736838,0,0,0,0.129159823477731,0,0,0.2604087696879,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0.183151624267265,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0.207574695168353,0,0,0,0.209613162627982,0.551530525350042,0,0.206035057238894,0.64183841918363,0,0,0,0.468207537349412,0.256100609619477,0.17230640686684,0,0,0.578727661391115,0,0.294397840268795,0.342869252385415,0.354951612318675,0.238436189947321,0,0.188218760830661,0.0846146078916765,0,0.789209134313529,0.271608227691724,0,0.118635018124174,0,0.409231043169689,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr16:92540124..92540127,+ | |||
}} |
Latest revision as of 05:19, 4 August 2015
Short description: | p@chr16:92540124..92540127, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:92540124..92540127, + |
Coexpression cluster: | MCL_coexpression_mm9:54 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 8.68e-10 | 3 |
epithelial cell of tracheobronchial tree | 8.68e-10 | 3 |
branched duct epithelial cell | 8.68e-10 | 3 |
epithelial cell of lower respiratory tract | 8.68e-10 | 3 |
respiratory epithelial cell | 8.68e-10 | 3 |
tracheal epithelial cell | 8.68e-10 | 3 |
tracheoblast | 8.68e-10 | 3 |
intestinal crypt stem cell | 1.94e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 3.43e-17 | 47 |
trachea | 8.68e-10 | 3 |
respiratory airway | 8.68e-10 | 3 |
tracheobronchial tree | 8.68e-10 | 3 |
lower respiratory tract | 8.68e-10 | 3 |
intestine | 1.51e-09 | 31 |
stomach | 9.91e-09 | 16 |
food storage organ | 9.91e-09 | 16 |
subdivision of digestive tract | 2.93e-08 | 114 |
digestive system | 4.90e-08 | 116 |
digestive tract | 4.90e-08 | 116 |
primitive gut | 4.90e-08 | 116 |
endoderm-derived structure | 8.04e-08 | 118 |
endoderm | 8.04e-08 | 118 |
presumptive endoderm | 8.04e-08 | 118 |